RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ARAP3Q8WWN8 1544 aa16.67■□□□□ 0.26
PDGFD-202ENST00000393158 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
PDGFD-202ENST00000393158 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
PDGFD-202ENST00000393158 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
PDGFD-202ENST00000393158 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
PDGFD-202ENST00000393158 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
PDGFD-202ENST00000393158 ARHGEF5Q12774 1597 aa16.64■□□□□ 0.25
PDGFD-202ENST00000393158 GLI2P10070 1586 aa16.62■□□□□ 0.25
PDGFD-202ENST00000393158 ABCC1P33527 1531 aa16.62■□□□□ 0.25
PDGFD-202ENST00000393158 ABCC5O15440 1437 aa16.62■□□□□ 0.25
PDGFD-202ENST00000393158 PLCH2O75038 1416 aa16.59■□□□□ 0.25
PDGFD-202ENST00000393158 DAPK1P53355 1430 aa16.59■□□□□ 0.25
PDGFD-202ENST00000393158 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
PDGFD-202ENST00000393158 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
PDGFD-202ENST00000393158 MAST1Q9Y2H9 1570 aa16.58■□□□□ 0.24
PDGFD-202ENST00000393158 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
PDGFD-202ENST00000393158 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
PDGFD-202ENST00000393158 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
PDGFD-202ENST00000393158 NAIPQ13075 1403 aa16.55■□□□□ 0.24
PDGFD-202ENST00000393158 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
PDGFD-202ENST00000393158 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
PDGFD-202ENST00000393158 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
PDGFD-202ENST00000393158 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
PDGFD-202ENST00000393158 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
PDGFD-202ENST00000393158 RICTORQ6R327 1708 aa16.52■□□□□ 0.24
PDGFD-202ENST00000393158 INO80Q9ULG1 1556 aaPredicted RBP16.52■□□□□ 0.24
PDGFD-202ENST00000393158 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.23
PDGFD-202ENST00000393158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
PDGFD-202ENST00000393158 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
PDGFD-202ENST00000393158 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
PDGFD-202ENST00000393158 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
PDGFD-202ENST00000393158 KIDINS220Q9ULH0 1771 aa16.49■□□□□ 0.23
PDGFD-202ENST00000393158 KDM5CP41229 1560 aa16.48■□□□□ 0.23
PDGFD-202ENST00000393158 ZFYVE16Q7Z3T8 1539 aa16.47■□□□□ 0.23
PDGFD-202ENST00000393158 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
PDGFD-202ENST00000393158 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
PDGFD-202ENST00000393158 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
PDGFD-202ENST00000393158 FANCAO15360 1455 aa16.46■□□□□ 0.23
PDGFD-202ENST00000393158 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
PDGFD-202ENST00000393158 CFAP74Q9C0B2 1584 aa16.46■□□□□ 0.23
PDGFD-202ENST00000393158 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
PDGFD-202ENST00000393158 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
PDGFD-202ENST00000393158 CCDC141Q6ZP82 1450 aa16.44■□□□□ 0.22
PDGFD-202ENST00000393158 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
PDGFD-202ENST00000393158 SIGLEC1Q9BZZ2 1709 aa16.44■□□□□ 0.22
PDGFD-202ENST00000393158 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
PDGFD-202ENST00000393158 SETD5Q9C0A6 1442 aa16.43■□□□□ 0.22
PDGFD-202ENST00000393158 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
PDGFD-202ENST00000393158 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
PDGFD-202ENST00000393158 DEPDC5O75140 1603 aa16.4■□□□□ 0.22
PDGFD-202ENST00000393158 CD109Q6YHK3 1445 aa16.39■□□□□ 0.22
PDGFD-202ENST00000393158 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
PDGFD-202ENST00000393158 UNC13BO14795 1591 aa16.38■□□□□ 0.21
PDGFD-202ENST00000393158 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
PDGFD-202ENST00000393158 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
PDGFD-202ENST00000393158 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
PDGFD-202ENST00000393158 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDGFD-202ENST00000393158 ITGAEP38570 1179 aa16.37■□□□□ 0.21
PDGFD-202ENST00000393158 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
PDGFD-202ENST00000393158 MAGI2Q86UL8 1455 aa16.37■□□□□ 0.21
PDGFD-202ENST00000393158 NEO1Q92859 1461 aa16.37■□□□□ 0.21
PDGFD-202ENST00000393158 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
PDGFD-202ENST00000393158 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
PDGFD-202ENST00000393158 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PDGFD-202ENST00000393158 ATP7AQ04656 1500 aa16.35■□□□□ 0.21
PDGFD-202ENST00000393158 HRCP23327 699 aa16.34■□□□□ 0.21
PDGFD-202ENST00000393158 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
PDGFD-202ENST00000393158 PZPP20742 1482 aa16.33■□□□□ 0.2
PDGFD-202ENST00000393158 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
PDGFD-202ENST00000393158 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
PDGFD-202ENST00000393158 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
PDGFD-202ENST00000393158 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
PDGFD-202ENST00000393158 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
PDGFD-202ENST00000393158 VWDEQ8N2E2 1590 aa16.31■□□□□ 0.2
PDGFD-202ENST00000393158 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
PDGFD-202ENST00000393158 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
PDGFD-202ENST00000393158 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
PDGFD-202ENST00000393158 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
PDGFD-202ENST00000393158 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
PDGFD-202ENST00000393158 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
PDGFD-202ENST00000393158 MLH3Q9UHC1 1453 aa16.28■□□□□ 0.2
PDGFD-202ENST00000393158 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
PDGFD-202ENST00000393158 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
PDGFD-202ENST00000393158 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
PDGFD-202ENST00000393158 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.19
PDGFD-202ENST00000393158 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
PDGFD-202ENST00000393158 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
PDGFD-202ENST00000393158 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
PDGFD-202ENST00000393158 PRDM15P57071 1507 aaPredicted RBP16.24■□□□□ 0.19
PDGFD-202ENST00000393158 ERBINQ96RT1 1412 aa16.23■□□□□ 0.19
PDGFD-202ENST00000393158 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
PDGFD-202ENST00000393158 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
PDGFD-202ENST00000393158 E9PCH4 1651 aa16.22■□□□□ 0.19
PDGFD-202ENST00000393158 FAM69CQ0P6D2 419 aa16.21■□□□□ 0.18
PDGFD-202ENST00000393158 REREQ9P2R6 1566 aa16.21■□□□□ 0.18
PDGFD-202ENST00000393158 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
PDGFD-202ENST00000393158 CEP152O94986 1710 aa16.19■□□□□ 0.18
PDGFD-202ENST00000393158 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
PDGFD-202ENST00000393158 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
PDGFD-202ENST00000393158 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms