RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
SNORA40.3-201ENST00000390964 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
SNORA40.3-201ENST00000390964 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
SNORA40.3-201ENST00000390964 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
SNORA40.3-201ENST00000390964 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
SNORA40.3-201ENST00000390964 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
SNORA40.3-201ENST00000390964 KIF3CO14782 793 aa9.77□□□□□ -0.85
SNORA40.3-201ENST00000390964 CDAN1Q8IWY9 1227 aa9.76□□□□□ -0.85
SNORA40.3-201ENST00000390964 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
SNORA40.3-201ENST00000390964 C2orf72A6NCS6 295 aa9.75□□□□□ -0.85
SNORA40.3-201ENST00000390964 PDE4AP27815 886 aa9.75□□□□□ -0.85
SNORA40.3-201ENST00000390964 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
SNORA40.3-201ENST00000390964 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
SNORA40.3-201ENST00000390964 CADPS2Q86UW7 1296 aa9.74□□□□□ -0.85
SNORA40.3-201ENST00000390964 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
SNORA40.3-201ENST00000390964 SNPHO15079 494 aa9.71□□□□□ -0.86
SNORA40.3-201ENST00000390964 FOXK1P85037 733 aa9.71□□□□□ -0.86
SNORA40.3-201ENST00000390964 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
SNORA40.3-201ENST00000390964 ST18O60284 1047 aa9.69□□□□□ -0.86
SNORA40.3-201ENST00000390964 MFSD10Q14728 455 aa9.68□□□□□ -0.86
SNORA40.3-201ENST00000390964 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
SNORA40.3-201ENST00000390964 DSG2Q14126 1118 aa9.67□□□□□ -0.86
SNORA40.3-201ENST00000390964 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
SNORA40.3-201ENST00000390964 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
SNORA40.3-201ENST00000390964 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
SNORA40.3-201ENST00000390964 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
SNORA40.3-201ENST00000390964 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.86
SNORA40.3-201ENST00000390964 PLPP6Q8IY26 295 aa9.65□□□□□ -0.86
SNORA40.3-201ENST00000390964 SLC34A2O95436 690 aa9.62□□□□□ -0.87
SNORA40.3-201ENST00000390964 RIMBP2O15034 1052 aa9.61□□□□□ -0.87
SNORA40.3-201ENST00000390964 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
SNORA40.3-201ENST00000390964 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
SNORA40.3-201ENST00000390964 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
SNORA40.3-201ENST00000390964 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
SNORA40.3-201ENST00000390964 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
SNORA40.3-201ENST00000390964 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.3-201ENST00000390964 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
SNORA40.3-201ENST00000390964 MMRN1Q13201 1228 aa9.54□□□□□ -0.88
SNORA40.3-201ENST00000390964 GPR153Q6NV75 609 aa9.54□□□□□ -0.88
SNORA40.3-201ENST00000390964 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
SNORA40.3-201ENST00000390964 TBC1D12O60347 775 aa9.53□□□□□ -0.88
SNORA40.3-201ENST00000390964 E2F4Q16254 413 aa9.53□□□□□ -0.88
SNORA40.3-201ENST00000390964 SPNS2Q8IVW8 549 aa9.53□□□□□ -0.88
SNORA40.3-201ENST00000390964 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
SNORA40.3-201ENST00000390964 EMILIN3Q9NT22 766 aa9.51□□□□□ -0.89
SNORA40.3-201ENST00000390964 ARSIQ5FYB1 569 aa9.5□□□□□ -0.89
SNORA40.3-201ENST00000390964 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
SNORA40.3-201ENST00000390964 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNORA40.3-201ENST00000390964 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
SNORA40.3-201ENST00000390964 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
SNORA40.3-201ENST00000390964 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
SNORA40.3-201ENST00000390964 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
SNORA40.3-201ENST00000390964 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
SNORA40.3-201ENST00000390964 NUDT7P0C024 238 aa9.45□□□□□ -0.9
SNORA40.3-201ENST00000390964 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNORA40.3-201ENST00000390964 EMP3P54852 163 aa9.44□□□□□ -0.9
SNORA40.3-201ENST00000390964 DPYSL4O14531 572 aa9.43□□□□□ -0.9
SNORA40.3-201ENST00000390964 KCNV2Q8TDN2 545 aa9.43□□□□□ -0.9
SNORA40.3-201ENST00000390964 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
SNORA40.3-201ENST00000390964 EVI5O60447 810 aa9.42□□□□□ -0.9
SNORA40.3-201ENST00000390964 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
SNORA40.3-201ENST00000390964 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
SNORA40.3-201ENST00000390964 SLC24A1O60721 1099 aa9.41□□□□□ -0.9
SNORA40.3-201ENST00000390964 ERBB3P21860 1342 aa9.4□□□□□ -0.9
SNORA40.3-201ENST00000390964 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
SNORA40.3-201ENST00000390964 PDIA6Q15084 440 aa9.39□□□□□ -0.91
SNORA40.3-201ENST00000390964 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
SNORA40.3-201ENST00000390964 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
SNORA40.3-201ENST00000390964 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
SNORA40.3-201ENST00000390964 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
SNORA40.3-201ENST00000390964 PTGER2P43116 358 aa9.36□□□□□ -0.91
SNORA40.3-201ENST00000390964 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
SNORA40.3-201ENST00000390964 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
SNORA40.3-201ENST00000390964 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
SNORA40.3-201ENST00000390964 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
SNORA40.3-201ENST00000390964 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
SNORA40.3-201ENST00000390964 FOSBP53539 338 aa9.32□□□□□ -0.92
SNORA40.3-201ENST00000390964 JPH4Q96JJ6 628 aa9.32□□□□□ -0.92
SNORA40.3-201ENST00000390964 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
SNORA40.3-201ENST00000390964 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
SNORA40.3-201ENST00000390964 PHF14O94880 888 aa9.3□□□□□ -0.92
SNORA40.3-201ENST00000390964 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
SNORA40.3-201ENST00000390964 EPAS1Q99814 870 aa9.28□□□□□ -0.92
SNORA40.3-201ENST00000390964 PCDHGA10Q9Y5H3 936 aa9.28□□□□□ -0.92
SNORA40.3-201ENST00000390964 DDX12PQ92771 950 aa9.27□□□□□ -0.93
SNORA40.3-201ENST00000390964 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
SNORA40.3-201ENST00000390964 ZDHHC16Q969W1 377 aa9.27□□□□□ -0.93
SNORA40.3-201ENST00000390964 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
SNORA40.3-201ENST00000390964 PBX2P40425 430 aa9.25□□□□□ -0.93
SNORA40.3-201ENST00000390964 SEMA3EO15041 775 aa9.24□□□□□ -0.93
SNORA40.3-201ENST00000390964 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
SNORA40.3-201ENST00000390964 GRXCR2A6NFK2 248 aa9.23□□□□□ -0.93
SNORA40.3-201ENST00000390964 ARHGAP33O14559 1287 aa9.22□□□□□ -0.93
SNORA40.3-201ENST00000390964 NBR1Q14596 966 aa9.22□□□□□ -0.93
SNORA40.3-201ENST00000390964 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
SNORA40.3-201ENST00000390964 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
SNORA40.3-201ENST00000390964 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.94
SNORA40.3-201ENST00000390964 OSBPP22059 807 aa9.21□□□□□ -0.94
SNORA40.3-201ENST00000390964 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
SNORA40.3-201ENST00000390964 PTPREP23469 700 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms