RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 SOX12O15370 315 aa4.06□□□□□ -1.76
RNU6-220P-201ENST00000390919 MLLT3P42568 568 aaPredicted RBP4.06□□□□□ -1.76
RNU6-220P-201ENST00000390919 SHROOM4Q9ULL8 1493 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 MINK1Q8N4C8 1332 aaPredicted RBP4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 NCKAP5LQ9HCH0 1330 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 MFSD10Q14728 455 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 TSPYL2Q9H2G4 693 aaPredicted RBP4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 GOPCQ9HD26 462 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 PCDHB8Q9UN66 801 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 PCDHB13Q9Y5F0 798 aa4.05□□□□□ -1.76
RNU6-220P-201ENST00000390919 PLEKHG3A1L390 1219 aa4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 RBM25P49756 843 aaKnown RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 PDE4CQ08493 712 aa4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 TTLL12Q14166 644 aaPredicted RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 PROSER2Q86WR7 435 aaPredicted RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 PELP1Q8IZL8 1130 aaKnown RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 EFCAB3Q8N7B9 438 aa4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 ZNF777Q9ULD5 760 aaPredicted RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 ATP1B4Q9UN42 357 aaPredicted RBP4.04□□□□□ -1.76
RNU6-220P-201ENST00000390919 MFAP1P55081 439 aaKnown RBP4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 MAP2K5Q13163 448 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 CAMK2BQ13554 666 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 ZNF579Q8NAF0 562 aaKnown RBP4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 FBXO22Q8NEZ5 403 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 FBXW7Q969H0 707 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 CCDC102AQ96A19 550 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 CABP2Q9NPB3 220 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 PHF8Q9UPP1 1060 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 MTMR7Q9Y216 660 aa4.03□□□□□ -1.76
RNU6-220P-201ENST00000390919 SPDYE16A6NNV3 312 aaPredicted RBP4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 PATL2C9JE40 543 aaKnown RBP4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 ONECUT3O60422 494 aaPredicted RBP4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 MCM6Q14566 821 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 AMHR2Q16671 573 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 PARP9Q8IXQ6 854 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 RGS22Q8NE09 1264 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 CRISPLD2Q9H0B8 497 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 GZF1Q9H116 711 aaPredicted RBP4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 MYT1LQ9UL68 1186 aa4.02□□□□□ -1.77
RNU6-220P-201ENST00000390919 NUTM2FA1L443 756 aa4.01□□□□□ -1.77
RNU6-220P-201ENST00000390919 ACIN1Q9UKV3 1341 aaKnown RBP4□□□□□ -1.77
RNU6-220P-201ENST00000390919 E9PSI1 815 aa4□□□□□ -1.77
RNU6-220P-201ENST00000390919 MYT1Q01538 1121 aa4□□□□□ -1.77
RNU6-220P-201ENST00000390919 RETREG2Q8NC44 543 aa4□□□□□ -1.77
RNU6-220P-201ENST00000390919 DPYSL4O14531 572 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 IRF6O14896 467 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 GOLGA2Q08379 1002 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 PPP1R15BQ5SWA1 713 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 FOXD4L5Q5VV16 416 aaPredicted RBP3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 WWC1Q8IX03 1113 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 FOXD4L4Q8WXT5 416 aaPredicted RBP3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 AKT1S1Q96B36 256 aa3.99□□□□□ -1.77
RNU6-220P-201ENST00000390919 LOC105371045A0A1W2PR82 267 aa3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 GNPATO15228 680 aa3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 CDK11BP21127 795 aaKnown RBP3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 PDIA6Q15084 440 aa3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 RBM42Q9BTD8 480 aaKnown RBP3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 CDK11AQ9UQ88 783 aaPredicted RBP3.98□□□□□ -1.77
RNU6-220P-201ENST00000390919 GPR37O15354 613 aa3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 IGSF3O75054 1194 aa3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 PPP1R15AO75807 674 aaPredicted RBP3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 PAK3O75914 559 aaPredicted RBP3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 SH3D19Q5HYK7 790 aa3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 GIGYF2Q6Y7W6 1299 aaKnown RBP3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 ZNF330Q9Y3S2 320 aaPredicted RBP3.97□□□□□ -1.77
RNU6-220P-201ENST00000390919 GRXCR2A6NFK2 248 aa3.96□□□□□ -1.78
RNU6-220P-201ENST00000390919 FCHSD2O94868 740 aa3.96□□□□□ -1.78
RNU6-220P-201ENST00000390919 HSP90B1P14625 803 aaKnown RBP3.96□□□□□ -1.78
RNU6-220P-201ENST00000390919 HIC1Q14526 733 aa3.96□□□□□ -1.78
RNU6-220P-201ENST00000390919 PLSCR2Q9NRY7 297 aa3.96□□□□□ -1.78
RNU6-220P-201ENST00000390919 SPDYE5A6NIY4 337 aa3.95□□□□□ -1.78
RNU6-220P-201ENST00000390919 IFNL1Q8IU54 200 aa3.95□□□□□ -1.78
RNU6-220P-201ENST00000390919 FNBP4Q8N3X1 1017 aaPredicted RBP3.95□□□□□ -1.78
RNU6-220P-201ENST00000390919 POM121Q96HA1 1249 aa3.95□□□□□ -1.78
RNU6-220P-201ENST00000390919 MS4A1P11836 297 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 KCNA1Q09470 495 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 IRF5Q13568 498 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 SKIV2LQ15477 1246 aaKnown RBP3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 ZNF428Q96B54 188 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 CALR3Q96L12 384 aaKnown RBP3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 PRM3Q9NNZ6 103 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 GPHNQ9NQX3 736 aaPredicted RBP3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 USP35Q9P2H5 1018 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 CCDC61Q9Y6R9 512 aa3.94□□□□□ -1.78
RNU6-220P-201ENST00000390919 CLCN1P35523 988 aa3.93□□□□□ -1.78
RNU6-220P-201ENST00000390919 REM2Q8IYK8 340 aaPredicted RBP3.93□□□□□ -1.78
RNU6-220P-201ENST00000390919 MS4A4AQ96JQ5 239 aa3.93□□□□□ -1.78
RNU6-220P-201ENST00000390919 COG6Q9Y2V7 657 aa3.93□□□□□ -1.78
RNU6-220P-201ENST00000390919 TTBK1Q5TCY1 1321 aaPredicted RBP3.93□□□□□ -1.78
RNU6-220P-201ENST00000390919 MAP3K9P80192 1104 aa3.92□□□□□ -1.78
RNU6-220P-201ENST00000390919 CCDC27Q2M243 656 aa3.92□□□□□ -1.78
RNU6-220P-201ENST00000390919 TMC2Q8TDI7 906 aa3.92□□□□□ -1.78
RNU6-220P-201ENST00000390919 EMILIN3Q9NT22 766 aa3.92□□□□□ -1.78
RNU6-220P-201ENST00000390919 BRD1O95696 1058 aa3.91□□□□□ -1.78
RNU6-220P-201ENST00000390919 CSB-PGBD3P0DP91 1061 aa3.91□□□□□ -1.78
RNU6-220P-201ENST00000390919 BANK1Q8NDB2 785 aa3.91□□□□□ -1.78
RNU6-220P-201ENST00000390919 GPCPD1Q9NPB8 672 aa3.91□□□□□ -1.78
RNU6-220P-201ENST00000390919 AMOTL2Q9Y2J4 779 aa3.91□□□□□ -1.78
RNU6-220P-201ENST00000390919 MAP3K13O43283 966 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms