RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
IGHV3-35-201ENST00000390617 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
IGHV3-35-201ENST00000390617 SIGLEC1Q9BZZ2 1709 aa24.86■■□□□ 1.57
IGHV3-35-201ENST00000390617 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
IGHV3-35-201ENST00000390617 YEATS2Q9ULM3 1422 aa24.86■■□□□ 1.57
IGHV3-35-201ENST00000390617 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
IGHV3-35-201ENST00000390617 PCF11O94913 1555 aaKnown RBP24.81■■□□□ 1.56
IGHV3-35-201ENST00000390617 CLIP1P30622 1438 aa24.8■■□□□ 1.56
IGHV3-35-201ENST00000390617 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
IGHV3-35-201ENST00000390617 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
IGHV3-35-201ENST00000390617 FER1L4A9Z1Z3 1794 aa24.77■■□□□ 1.56
IGHV3-35-201ENST00000390617 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
IGHV3-35-201ENST00000390617 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
IGHV3-35-201ENST00000390617 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
IGHV3-35-201ENST00000390617 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
IGHV3-35-201ENST00000390617 ZNF518AQ6AHZ1 1483 aa24.75■■□□□ 1.55
IGHV3-35-201ENST00000390617 ATP10AO60312 1499 aa24.74■■□□□ 1.55
IGHV3-35-201ENST00000390617 KDM5CP41229 1560 aa24.74■■□□□ 1.55
IGHV3-35-201ENST00000390617 C9orf84Q5VXU9 1444 aa24.72■■□□□ 1.55
IGHV3-35-201ENST00000390617 PREX2Q70Z35 1606 aa24.71■■□□□ 1.55
IGHV3-35-201ENST00000390617 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
IGHV3-35-201ENST00000390617 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
IGHV3-35-201ENST00000390617 MLECQ14165 292 aa24.65■■□□□ 1.54
IGHV3-35-201ENST00000390617 CDC42BPAQ5VT25 1732 aa24.64■■□□□ 1.54
IGHV3-35-201ENST00000390617 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
IGHV3-35-201ENST00000390617 DIP2CQ9Y2E4 1556 aa24.63■■□□□ 1.53
IGHV3-35-201ENST00000390617 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
IGHV3-35-201ENST00000390617 ABCC1P33527 1531 aa24.63■■□□□ 1.53
IGHV3-35-201ENST00000390617 AFAP1Q8N556 730 aa24.63■■□□□ 1.53
IGHV3-35-201ENST00000390617 MLH3Q9UHC1 1453 aa24.61■■□□□ 1.53
IGHV3-35-201ENST00000390617 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
IGHV3-35-201ENST00000390617 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
IGHV3-35-201ENST00000390617 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
IGHV3-35-201ENST00000390617 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
IGHV3-35-201ENST00000390617 FBXO41Q8TF61 875 aa24.55■■□□□ 1.52
IGHV3-35-201ENST00000390617 HSPA2P54652 639 aa24.54■■□□□ 1.52
IGHV3-35-201ENST00000390617 MYT1LQ9UL68 1186 aa24.54■■□□□ 1.52
IGHV3-35-201ENST00000390617 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
IGHV3-35-201ENST00000390617 AGLP35573 1532 aa24.53■■□□□ 1.52
IGHV3-35-201ENST00000390617 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
IGHV3-35-201ENST00000390617 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
IGHV3-35-201ENST00000390617 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
IGHV3-35-201ENST00000390617 C3P01024 1663 aa24.46■■□□□ 1.51
IGHV3-35-201ENST00000390617 CEBPAP49715 358 aaPredicted RBP24.45■■□□□ 1.5
IGHV3-35-201ENST00000390617 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
IGHV3-35-201ENST00000390617 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
IGHV3-35-201ENST00000390617 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
IGHV3-35-201ENST00000390617 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-35-201ENST00000390617 KIAA1107Q9UPP5 1409 aa24.4■■□□□ 1.5
IGHV3-35-201ENST00000390617 STRCQ7RTU9 1775 aa24.39■■□□□ 1.49
IGHV3-35-201ENST00000390617 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
IGHV3-35-201ENST00000390617 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
IGHV3-35-201ENST00000390617 ATP7AQ04656 1500 aa24.37■■□□□ 1.49
IGHV3-35-201ENST00000390617 ESF1Q9H501 851 aaKnown RBP24.37■■□□□ 1.49
IGHV3-35-201ENST00000390617 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
IGHV3-35-201ENST00000390617 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
IGHV3-35-201ENST00000390617 MROH2AA6NES4 1674 aa24.36■■□□□ 1.49
IGHV3-35-201ENST00000390617 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
IGHV3-35-201ENST00000390617 EHBP1L1Q8N3D4 1523 aa24.35■■□□□ 1.49
IGHV3-35-201ENST00000390617 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
IGHV3-35-201ENST00000390617 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
IGHV3-35-201ENST00000390617 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
IGHV3-35-201ENST00000390617 PLXNC1O60486 1568 aa24.33■■□□□ 1.49
IGHV3-35-201ENST00000390617 TIAM1Q13009 1591 aa24.33■■□□□ 1.48
IGHV3-35-201ENST00000390617 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
IGHV3-35-201ENST00000390617 DMRT2Q9Y5R5 561 aa24.3■■□□□ 1.48
IGHV3-35-201ENST00000390617 CERKQ8TCT0 537 aa24.29■■□□□ 1.48
IGHV3-35-201ENST00000390617 ADGBQ8N7X0 1667 aa24.29■■□□□ 1.48
IGHV3-35-201ENST00000390617 A2MP01023 1474 aa24.27■■□□□ 1.48
IGHV3-35-201ENST00000390617 NPATQ14207 1427 aa24.26■■□□□ 1.47
IGHV3-35-201ENST00000390617 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
IGHV3-35-201ENST00000390617 PTPRTO14522 1441 aa24.23■■□□□ 1.47
IGHV3-35-201ENST00000390617 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
IGHV3-35-201ENST00000390617 ZMYM3Q14202 1370 aa24.22■■□□□ 1.47
IGHV3-35-201ENST00000390617 RTEL1-TNFRSF6BF6WH68 1400 aa24.19■■□□□ 1.46
IGHV3-35-201ENST00000390617 ZNF644Q9H582 1327 aaPredicted RBP24.19■■□□□ 1.46
IGHV3-35-201ENST00000390617 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
IGHV3-35-201ENST00000390617 ZNF142P52746 1687 aaPredicted RBP24.17■■□□□ 1.46
IGHV3-35-201ENST00000390617 NCOA2Q15596 1464 aa24.16■■□□□ 1.46
IGHV3-35-201ENST00000390617 MYO3AQ8NEV4 1616 aa24.15■■□□□ 1.46
IGHV3-35-201ENST00000390617 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
IGHV3-35-201ENST00000390617 CAMSAP1Q5T5Y3 1602 aa24.14■■□□□ 1.46
IGHV3-35-201ENST00000390617 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
IGHV3-35-201ENST00000390617 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
IGHV3-35-201ENST00000390617 PTPRKQ15262 1439 aa24.12■■□□□ 1.45
IGHV3-35-201ENST00000390617 GGT6Q6P531 493 aa24.12■■□□□ 1.45
IGHV3-35-201ENST00000390617 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
IGHV3-35-201ENST00000390617 CEP170BQ9Y4F5 1589 aaPredicted RBP24.1■■□□□ 1.45
IGHV3-35-201ENST00000390617 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
IGHV3-35-201ENST00000390617 LTBP4Q8N2S1 1624 aa24.09■■□□□ 1.45
IGHV3-35-201ENST00000390617 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
IGHV3-35-201ENST00000390617 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
IGHV3-35-201ENST00000390617 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
IGHV3-35-201ENST00000390617 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
IGHV3-35-201ENST00000390617 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
IGHV3-35-201ENST00000390617 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
IGHV3-35-201ENST00000390617 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
IGHV3-35-201ENST00000390617 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
IGHV3-35-201ENST00000390617 MAP3K1Q13233 1512 aa24■■□□□ 1.43
IGHV3-35-201ENST00000390617 KIF3BO15066 747 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms