RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 REM2Q8IYK8 340 aaPredicted RBP2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 FAM117AQ9C073 453 aa2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 GOPCQ9HD26 462 aa2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 PHF8Q9UPP1 1060 aa2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 MINK1Q8N4C8 1332 aaPredicted RBP2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 ARID3CA6NKF2 412 aa2.87□□□□□ -1.95
TRAJ39-201ENST00000390498 SPDYE16A6NNV3 312 aaPredicted RBP2.87□□□□□ -1.95
TRAJ39-201ENST00000390498 CABP2Q9NPB3 220 aa2.87□□□□□ -1.95
TRAJ39-201ENST00000390498 CCDC61Q9Y6R9 512 aa2.87□□□□□ -1.95
TRAJ39-201ENST00000390498 PLEKHG3A1L390 1219 aa2.86□□□□□ -1.95
TRAJ39-201ENST00000390498 TRAK2O60296 914 aa2.86□□□□□ -1.95
TRAJ39-201ENST00000390498 ONECUT3O60422 494 aaPredicted RBP2.86□□□□□ -1.95
TRAJ39-201ENST00000390498 AMHR2Q16671 573 aa2.86□□□□□ -1.95
TRAJ39-201ENST00000390498 MAP2K5Q13163 448 aa2.85□□□□□ -1.95
TRAJ39-201ENST00000390498 CCDC82Q8N4S0 544 aa2.85□□□□□ -1.95
TRAJ39-201ENST00000390498 KCTD17Q8N5Z5 321 aa2.85□□□□□ -1.95
TRAJ39-201ENST00000390498 TRAIPQ9BWF2 469 aa2.85□□□□□ -1.95
TRAJ39-201ENST00000390498 IRF6O14896 467 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 GPR37O15354 613 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 PDIA6Q15084 440 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 PPP1R15BQ5SWA1 713 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 IFNL1Q8IU54 200 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 NECTIN2Q92692 538 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 MS4A4AQ96JQ5 239 aa2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 PCMTD1Q96MG8 357 aaPredicted RBP2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 FARP1Q9Y4F1 1045 aaPredicted RBP2.84□□□□□ -1.95
TRAJ39-201ENST00000390498 PITPNM1O00562 1244 aa2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 PAK3O75914 559 aaPredicted RBP2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 PARP9Q8IXQ6 854 aa2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 CCDC102AQ96A19 550 aa2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 CLUAP1Q96AJ1 413 aa2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 GPHNQ9NQX3 736 aaPredicted RBP2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 SERPINA10Q9UK55 444 aa2.83□□□□□ -1.96
TRAJ39-201ENST00000390498 DPYSL4O14531 572 aa2.82□□□□□ -1.96
TRAJ39-201ENST00000390498 MAP3K13O43283 966 aa2.82□□□□□ -1.96
TRAJ39-201ENST00000390498 KIF12Q96FN5 646 aa2.82□□□□□ -1.96
TRAJ39-201ENST00000390498 GNPATO15228 680 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 FCHSD2O94868 740 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 GOLGA2Q08379 1002 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 HIC1Q14526 733 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 MCM6Q14566 821 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 CHADLQ6NUI6 762 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 PROSER2Q86WR7 435 aaPredicted RBP2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 CCDC97Q96F63 343 aaPredicted RBP2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 EMILIN3Q9NT22 766 aa2.81□□□□□ -1.96
TRAJ39-201ENST00000390498 NUTM2FA1L443 756 aa2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 RAD21O60216 631 aa2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 TTLL12Q14166 644 aaPredicted RBP2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 SH3D19Q5HYK7 790 aa2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 FNBP4Q8N3X1 1017 aaPredicted RBP2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 ZNF777Q9ULD5 760 aaPredicted RBP2.8□□□□□ -1.96
TRAJ39-201ENST00000390498 OSBPP22059 807 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 FOXK1P85037 733 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 PDE4CQ08493 712 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 DSG2Q14126 1118 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 SKIV2LQ15477 1246 aaKnown RBP2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 GIGYF2Q6Y7W6 1299 aaKnown RBP2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 AEBP1Q8IUX7 1158 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 RGS22Q8NE09 1264 aa2.79□□□□□ -1.96
TRAJ39-201ENST00000390498 GRXCR2A6NFK2 248 aa2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 PATL2C9JE40 543 aaKnown RBP2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 PPP1R15AO75807 674 aaPredicted RBP2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 MS4A1P11836 297 aa2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 PTGER2P43116 358 aa2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 CACNB1Q02641 598 aaPredicted RBP2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 TMCO4Q5TGY1 634 aa2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 ILDR1Q86SU0 546 aaPredicted RBP2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 TMC2Q8TDI7 906 aa2.78□□□□□ -1.96
TRAJ39-201ENST00000390498 SPDYE5A6NIY4 337 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 PRKAR2AP13861 404 aaKnown RBP2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 FECHP22830 423 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 CLCN1P35523 988 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 MAP3K9P80192 1104 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 RETREG2Q8NC44 543 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 OXER1Q8TDS5 423 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 TMUB1Q9BVT8 246 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 TMEM106CQ9BVX2 250 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 PLSCR2Q9NRY7 297 aa2.77□□□□□ -1.97
TRAJ39-201ENST00000390498 ACIN1Q9UKV3 1341 aaKnown RBP2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 MFAP1P55081 439 aaKnown RBP2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 PTGDRQ13258 359 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 PLPP6Q8IY26 295 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 BANK1Q8NDB2 785 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 POM121Q96HA1 1249 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 REPIN1Q9BWE0 567 aaKnown RBP2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 GZF1Q9H116 711 aaPredicted RBP2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 GPCPD1Q9NPB8 672 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 MTMR7Q9Y216 660 aa2.76□□□□□ -1.97
TRAJ39-201ENST00000390498 SSTR3P32745 418 aaPredicted RBP2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 IRF5Q13568 498 aa2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 WWC1Q8IX03 1113 aa2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 COG6Q9Y2V7 657 aa2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 ZNF330Q9Y3S2 320 aaPredicted RBP2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 SHROOM4Q9ULL8 1493 aa2.75□□□□□ -1.97
TRAJ39-201ENST00000390498 FXR2P51116 673 aaKnown RBP eCLIP2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 TMEM259Q4ZIN3 620 aa2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 MICALL2Q8IY33 904 aa2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 PROCA1Q8NCQ7 364 aaPredicted RBP2.74□□□□□ -1.97
TRAJ39-201ENST00000390498 FBXW7Q969H0 707 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms