RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 DENND4BO75064 1496 aaPredicted RBP11.64□□□□□ -0.55
TRAV38-1-201ENST00000390464 PCF11O94913 1555 aaKnown RBP11.64□□□□□ -0.55
TRAV38-1-201ENST00000390464 CCDC18Q5T9S5 1454 aa11.63□□□□□ -0.55
TRAV38-1-201ENST00000390464 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
TRAV38-1-201ENST00000390464 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
TRAV38-1-201ENST00000390464 AKNAQ7Z591 1439 aa11.62□□□□□ -0.55
TRAV38-1-201ENST00000390464 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
TRAV38-1-201ENST00000390464 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 ZMYM4Q5VZL5 1548 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 ZFYVE16Q7Z3T8 1539 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 RAPGEF3O95398 923 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 ADAMTSL3P82987 1691 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 RIMS1Q86UR5 1692 aaKnown RBP11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 FER1L4A9Z1Z3 1794 aa11.61□□□□□ -0.55
TRAV38-1-201ENST00000390464 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 PREX2Q70Z35 1606 aa11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 TROQ12816 1431 aaPredicted RBP11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 POGZQ7Z3K3 1410 aa11.59□□□□□ -0.55
TRAV38-1-201ENST00000390464 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
TRAV38-1-201ENST00000390464 PLCH2O75038 1416 aa11.57□□□□□ -0.56
TRAV38-1-201ENST00000390464 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
TRAV38-1-201ENST00000390464 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
TRAV38-1-201ENST00000390464 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
TRAV38-1-201ENST00000390464 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
TRAV38-1-201ENST00000390464 EFCAB2Q5VUJ9 269 aa11.55□□□□□ -0.56
TRAV38-1-201ENST00000390464 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
TRAV38-1-201ENST00000390464 ZNF518AQ6AHZ1 1483 aa11.55□□□□□ -0.56
TRAV38-1-201ENST00000390464 PTPRMP28827 1452 aa11.54□□□□□ -0.56
TRAV38-1-201ENST00000390464 C9orf84Q5VXU9 1444 aa11.51□□□□□ -0.57
TRAV38-1-201ENST00000390464 KDM5CP41229 1560 aa11.5□□□□□ -0.57
TRAV38-1-201ENST00000390464 ABCC1P33527 1531 aa11.5□□□□□ -0.57
TRAV38-1-201ENST00000390464 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
TRAV38-1-201ENST00000390464 YEATS2Q9ULM3 1422 aa11.49□□□□□ -0.57
TRAV38-1-201ENST00000390464 ATP10AO60312 1499 aa11.48□□□□□ -0.57
TRAV38-1-201ENST00000390464 PREX1Q8TCU6 1659 aa11.47□□□□□ -0.57
TRAV38-1-201ENST00000390464 ABCA6Q8N139 1617 aa11.47□□□□□ -0.57
TRAV38-1-201ENST00000390464 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
TRAV38-1-201ENST00000390464 DIP2CQ9Y2E4 1556 aa11.46□□□□□ -0.57
TRAV38-1-201ENST00000390464 EHBP1L1Q8N3D4 1523 aa11.46□□□□□ -0.57
TRAV38-1-201ENST00000390464 SUPT6HQ7KZ85 1726 aaKnown RBP11.46□□□□□ -0.58
TRAV38-1-201ENST00000390464 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
TRAV38-1-201ENST00000390464 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
TRAV38-1-201ENST00000390464 MLECQ14165 292 aa11.45□□□□□ -0.58
TRAV38-1-201ENST00000390464 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
TRAV38-1-201ENST00000390464 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
TRAV38-1-201ENST00000390464 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
TRAV38-1-201ENST00000390464 SAMD9LQ8IVG5 1584 aa11.44□□□□□ -0.58
TRAV38-1-201ENST00000390464 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
TRAV38-1-201ENST00000390464 PLEKHH2Q8IVE3 1493 aa11.44□□□□□ -0.58
TRAV38-1-201ENST00000390464 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
TRAV38-1-201ENST00000390464 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
TRAV38-1-201ENST00000390464 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
TRAV38-1-201ENST00000390464 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
TRAV38-1-201ENST00000390464 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
TRAV38-1-201ENST00000390464 MLH3Q9UHC1 1453 aa11.42□□□□□ -0.58
TRAV38-1-201ENST00000390464 C3P01024 1663 aa11.4□□□□□ -0.58
TRAV38-1-201ENST00000390464 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
TRAV38-1-201ENST00000390464 AFAP1Q8N556 730 aa11.4□□□□□ -0.58
TRAV38-1-201ENST00000390464 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
TRAV38-1-201ENST00000390464 ATP7AQ04656 1500 aa11.4□□□□□ -0.59
TRAV38-1-201ENST00000390464 MROH2AA6NES4 1674 aa11.4□□□□□ -0.59
TRAV38-1-201ENST00000390464 CFDP1Q9UEE9 299 aaPredicted RBP11.39□□□□□ -0.59
TRAV38-1-201ENST00000390464 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
TRAV38-1-201ENST00000390464 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
TRAV38-1-201ENST00000390464 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
TRAV38-1-201ENST00000390464 AGLP35573 1532 aa11.38□□□□□ -0.59
TRAV38-1-201ENST00000390464 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
TRAV38-1-201ENST00000390464 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
TRAV38-1-201ENST00000390464 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
TRAV38-1-201ENST00000390464 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
TRAV38-1-201ENST00000390464 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
TRAV38-1-201ENST00000390464 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
TRAV38-1-201ENST00000390464 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
TRAV38-1-201ENST00000390464 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 PLXNC1O60486 1568 aa11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 A2MP01023 1474 aa11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
TRAV38-1-201ENST00000390464 HSPA2P54652 639 aa11.3□□□□□ -0.6
TRAV38-1-201ENST00000390464 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
TRAV38-1-201ENST00000390464 HOXD11P31277 338 aaPredicted RBP11.29□□□□□ -0.6
TRAV38-1-201ENST00000390464 APLP2Q06481 763 aa11.29□□□□□ -0.6
TRAV38-1-201ENST00000390464 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 CEBPAP49715 358 aaPredicted RBP11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
TRAV38-1-201ENST00000390464 LRRC9Q6ZRR7 1453 aa11.27□□□□□ -0.6
TRAV38-1-201ENST00000390464 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
TRAV38-1-201ENST00000390464 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
TRAV38-1-201ENST00000390464 NPATQ14207 1427 aa11.26□□□□□ -0.61
TRAV38-1-201ENST00000390464 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
TRAV38-1-201ENST00000390464 RSPH4AQ5TD94 716 aa11.25□□□□□ -0.61
TRAV38-1-201ENST00000390464 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
TRAV38-1-201ENST00000390464 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms