RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 TMC2Q8TDI7 906 aa8.16□□□□□ -1.1
RNU6-39P-201ENST00000384344 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.15□□□□□ -1.1
RNU6-39P-201ENST00000384344 CADPS2Q86UW7 1296 aa8.13□□□□□ -1.11
RNU6-39P-201ENST00000384344 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
RNU6-39P-201ENST00000384344 LARP6Q9BRS8 491 aaKnown RBP8.12□□□□□ -1.11
RNU6-39P-201ENST00000384344 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
RNU6-39P-201ENST00000384344 CRISPLD2Q9H0B8 497 aa8.11□□□□□ -1.11
RNU6-39P-201ENST00000384344 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
RNU6-39P-201ENST00000384344 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
RNU6-39P-201ENST00000384344 P3H3Q8IVL6 736 aa8.09□□□□□ -1.11
RNU6-39P-201ENST00000384344 NCKAP5LQ9HCH0 1330 aa8.08□□□□□ -1.12
RNU6-39P-201ENST00000384344 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
RNU6-39P-201ENST00000384344 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
RNU6-39P-201ENST00000384344 MFSD10Q14728 455 aa8.06□□□□□ -1.12
RNU6-39P-201ENST00000384344 POTEMA6NI47 508 aa8.05□□□□□ -1.12
RNU6-39P-201ENST00000384344 FOXK1P85037 733 aa8.05□□□□□ -1.12
RNU6-39P-201ENST00000384344 E2F4Q16254 413 aa8.05□□□□□ -1.12
RNU6-39P-201ENST00000384344 SLAIN1Q8ND83 568 aa8.04□□□□□ -1.12
RNU6-39P-201ENST00000384344 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
RNU6-39P-201ENST00000384344 KIF3CO14782 793 aa8.03□□□□□ -1.12
RNU6-39P-201ENST00000384344 DSG2Q14126 1118 aa8.03□□□□□ -1.12
RNU6-39P-201ENST00000384344 PLPP6Q8IY26 295 aa8.02□□□□□ -1.13
RNU6-39P-201ENST00000384344 POTEJP0CG39 1038 aa8.01□□□□□ -1.13
RNU6-39P-201ENST00000384344 TMEM92Q6UXU6 159 aa8.01□□□□□ -1.13
RNU6-39P-201ENST00000384344 POTEGQ6S5H5 508 aa8□□□□□ -1.13
RNU6-39P-201ENST00000384344 SNPHO15079 494 aa7.99□□□□□ -1.13
RNU6-39P-201ENST00000384344 NBR1Q14596 966 aa7.98□□□□□ -1.13
RNU6-39P-201ENST00000384344 ZNF316A6NFI3 1004 aaPredicted RBP7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 TBC1D12O60347 775 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 CAMK2BQ13554 666 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 KCNV2Q8TDN2 545 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 ARHGEF1Q92888 912 aaKnown RBP7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 OTUD5Q96G74 571 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 BCANQ96GW7 911 aa7.97□□□□□ -1.13
RNU6-39P-201ENST00000384344 MAP3K9P80192 1104 aa7.94□□□□□ -1.14
RNU6-39P-201ENST00000384344 ZNF710Q8N1W2 664 aa7.94□□□□□ -1.14
RNU6-39P-201ENST00000384344 SLC34A2O95436 690 aa7.93□□□□□ -1.14
RNU6-39P-201ENST00000384344 UPF1Q92900 1129 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU6-39P-201ENST00000384344 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
RNU6-39P-201ENST00000384344 ARIH1Q9Y4X5 557 aaPredicted RBP7.92□□□□□ -1.14
RNU6-39P-201ENST00000384344 SPDYE16A6NNV3 312 aaPredicted RBP7.91□□□□□ -1.14
RNU6-39P-201ENST00000384344 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
RNU6-39P-201ENST00000384344 DPYSL4O14531 572 aa7.9□□□□□ -1.14
RNU6-39P-201ENST00000384344 OXER1Q8TDS5 423 aa7.9□□□□□ -1.14
RNU6-39P-201ENST00000384344 PTCD2Q8WV60 388 aaKnown RBP7.9□□□□□ -1.14
RNU6-39P-201ENST00000384344 ZSWIM6Q9HCJ5 1215 aa7.9□□□□□ -1.14
RNU6-39P-201ENST00000384344 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
RNU6-39P-201ENST00000384344 PDIA6Q15084 440 aa7.86□□□□□ -1.15
RNU6-39P-201ENST00000384344 SMYD5Q6GMV2 418 aa7.86□□□□□ -1.15
RNU6-39P-201ENST00000384344 PCDHGA4Q9Y5G9 962 aa7.86□□□□□ -1.15
RNU6-39P-201ENST00000384344 HOXB3P14651 431 aaPredicted RBP7.85□□□□□ -1.15
RNU6-39P-201ENST00000384344 EVI5O60447 810 aa7.84□□□□□ -1.15
RNU6-39P-201ENST00000384344 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
RNU6-39P-201ENST00000384344 SEMA3EO15041 775 aa7.8□□□□□ -1.16
RNU6-39P-201ENST00000384344 PSDA5PKW4 1024 aaPredicted RBP7.79□□□□□ -1.16
RNU6-39P-201ENST00000384344 NUDT7P0C024 238 aa7.79□□□□□ -1.16
RNU6-39P-201ENST00000384344 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
RNU6-39P-201ENST00000384344 GPR153Q6NV75 609 aa7.79□□□□□ -1.16
RNU6-39P-201ENST00000384344 TESPA1A2RU30 521 aaPredicted RBP7.78□□□□□ -1.16
RNU6-39P-201ENST00000384344 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
RNU6-39P-201ENST00000384344 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
RNU6-39P-201ENST00000384344 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
RNU6-39P-201ENST00000384344 PTGER2P43116 358 aa7.77□□□□□ -1.17
RNU6-39P-201ENST00000384344 FAM163AQ96GL9 167 aaPredicted RBP7.77□□□□□ -1.17
RNU6-39P-201ENST00000384344 DDX12PQ92771 950 aa7.76□□□□□ -1.17
RNU6-39P-201ENST00000384344 KHSRPQ92945 711 aaKnown RBP eCLIP7.76□□□□□ -1.17
RNU6-39P-201ENST00000384344 EMP3P54852 163 aa7.75□□□□□ -1.17
RNU6-39P-201ENST00000384344 JPH4Q96JJ6 628 aa7.75□□□□□ -1.17
RNU6-39P-201ENST00000384344 EPAS1Q99814 870 aa7.75□□□□□ -1.17
RNU6-39P-201ENST00000384344 ST18O60284 1047 aa7.74□□□□□ -1.17
RNU6-39P-201ENST00000384344 PHF14O94880 888 aa7.74□□□□□ -1.17
RNU6-39P-201ENST00000384344 MLLT3P42568 568 aaPredicted RBP7.74□□□□□ -1.17
RNU6-39P-201ENST00000384344 PPP4R3BQ5MIZ7 849 aa7.74□□□□□ -1.17
RNU6-39P-201ENST00000384344 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
RNU6-39P-201ENST00000384344 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
RNU6-39P-201ENST00000384344 ZNF454Q8N9F8 522 aa7.73□□□□□ -1.17
RNU6-39P-201ENST00000384344 LHX6Q9UPM6 363 aa7.73□□□□□ -1.17
RNU6-39P-201ENST00000384344 KDM4FA0A1W2PPD8 638 aa7.72□□□□□ -1.17
RNU6-39P-201ENST00000384344 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
RNU6-39P-201ENST00000384344 ERBB3P21860 1342 aa7.72□□□□□ -1.17
RNU6-39P-201ENST00000384344 FOSBP53539 338 aa7.71□□□□□ -1.18
RNU6-39P-201ENST00000384344 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
RNU6-39P-201ENST00000384344 ZDHHC16Q969W1 377 aa7.7□□□□□ -1.18
RNU6-39P-201ENST00000384344 MAP3K7O43318 606 aa7.69□□□□□ -1.18
RNU6-39P-201ENST00000384344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.69□□□□□ -1.18
RNU6-39P-201ENST00000384344 MARVELD3Q96A59 401 aa7.69□□□□□ -1.18
RNU6-39P-201ENST00000384344 PCDHGA10Q9Y5H3 936 aa7.69□□□□□ -1.18
RNU6-39P-201ENST00000384344 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
RNU6-39P-201ENST00000384344 OSBPP22059 807 aa7.68□□□□□ -1.18
RNU6-39P-201ENST00000384344 EN1Q05925 392 aaPredicted RBP7.67□□□□□ -1.18
RNU6-39P-201ENST00000384344 VARS2Q5ST30 1063 aaKnown RBP7.67□□□□□ -1.18
RNU6-39P-201ENST00000384344 GPIHBP1Q8IV16 184 aa7.67□□□□□ -1.18
RNU6-39P-201ENST00000384344 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
RNU6-39P-201ENST00000384344 RBM26Q5T8P6 1007 aaKnown RBP7.66□□□□□ -1.18
RNU6-39P-201ENST00000384344 FAM205CA6NFA0 338 aa7.65□□□□□ -1.18
RNU6-39P-201ENST00000384344 PTPREP23469 700 aa7.65□□□□□ -1.18
RNU6-39P-201ENST00000384344 CERKQ8TCT0 537 aa7.64□□□□□ -1.19
RNU6-39P-201ENST00000384344 BCL2L12Q9HB09 334 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms