RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 EFCAB2Q5VUJ9 269 aa30.47■■■□□ 2.47
GTF3A-201ENST00000381140 MAP3K1Q13233 1512 aa30.47■■■□□ 2.47
GTF3A-201ENST00000381140 LRRC9Q6ZRR7 1453 aa30.46■■■□□ 2.47
GTF3A-201ENST00000381140 CCNB3Q8WWL7 1395 aa30.44■■■□□ 2.46
GTF3A-201ENST00000381140 ADGRL1O94910 1474 aa30.43■■■□□ 2.46
GTF3A-201ENST00000381140 RAPGEF3O95398 923 aa30.42■■■□□ 2.46
GTF3A-201ENST00000381140 KANK4Q5T7N3 995 aaPredicted RBP30.42■■■□□ 2.46
GTF3A-201ENST00000381140 GPATCH8Q9UKJ3 1502 aaKnown RBP30.41■■■□□ 2.46
GTF3A-201ENST00000381140 RICTORQ6R327 1708 aa30.4■■■□□ 2.46
GTF3A-201ENST00000381140 DENND4BO75064 1496 aaPredicted RBP30.39■■■□□ 2.46
GTF3A-201ENST00000381140 NCOA2Q15596 1464 aa30.39■■■□□ 2.46
GTF3A-201ENST00000381140 ITSN2Q9NZM3 1697 aa30.39■■■□□ 2.46
GTF3A-201ENST00000381140 FRMPD1Q5SYB0 1578 aa30.39■■■□□ 2.45
GTF3A-201ENST00000381140 ZNF777Q9ULD5 760 aaPredicted RBP30.38■■■□□ 2.45
GTF3A-201ENST00000381140 SCAPERQ9BY12 1400 aa30.37■■■□□ 2.45
GTF3A-201ENST00000381140 CFDP1Q9UEE9 299 aaPredicted RBP30.33■■■□□ 2.45
GTF3A-201ENST00000381140 SAMD9LQ8IVG5 1584 aa30.31■■■□□ 2.44
GTF3A-201ENST00000381140 ABCC1P33527 1531 aa30.3■■■□□ 2.44
GTF3A-201ENST00000381140 POGZQ7Z3K3 1410 aa30.28■■■□□ 2.44
GTF3A-201ENST00000381140 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
GTF3A-201ENST00000381140 ARHGEF12Q9NZN5 1544 aa30.24■■■□□ 2.43
GTF3A-201ENST00000381140 ZMYM4Q5VZL5 1548 aa30.22■■■□□ 2.43
GTF3A-201ENST00000381140 ZNF518AQ6AHZ1 1483 aa30.21■■■□□ 2.43
GTF3A-201ENST00000381140 ZNF644Q9H582 1327 aaPredicted RBP30.19■■■□□ 2.42
GTF3A-201ENST00000381140 AFAP1Q8N556 730 aa30.19■■■□□ 2.42
GTF3A-201ENST00000381140 TRAPPC8Q9Y2L5 1435 aa30.19■■■□□ 2.42
GTF3A-201ENST00000381140 HNRNPMP52272 730 aaKnown RBP eCLIP30.18■■■□□ 2.42
GTF3A-201ENST00000381140 MYT1LQ9UL68 1186 aa30.18■■■□□ 2.42
GTF3A-201ENST00000381140 PLEKHH2Q8IVE3 1493 aa30.18■■■□□ 2.42
GTF3A-201ENST00000381140 ZFYVE16Q7Z3T8 1539 aa30.17■■■□□ 2.42
GTF3A-201ENST00000381140 ARHGEF40Q8TER5 1519 aa30.17■■■□□ 2.42
GTF3A-201ENST00000381140 KDM5CP41229 1560 aa30.15■■■□□ 2.42
GTF3A-201ENST00000381140 MYOM3Q5VTT5 1437 aa30.14■■■□□ 2.42
GTF3A-201ENST00000381140 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
GTF3A-201ENST00000381140 PPARGC1BQ86YN6 1023 aaKnown RBP30.14■■■□□ 2.41
GTF3A-201ENST00000381140 YEATS2Q9ULM3 1422 aa30.13■■■□□ 2.41
GTF3A-201ENST00000381140 HECW2Q9P2P5 1572 aa30.13■■■□□ 2.41
GTF3A-201ENST00000381140 KIAA1107Q9UPP5 1409 aa30.12■■■□□ 2.41
GTF3A-201ENST00000381140 MAGI2Q86UL8 1455 aa30.11■■■□□ 2.41
GTF3A-201ENST00000381140 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
GTF3A-201ENST00000381140 MIA2Q96PC5 1412 aa30.04■■■□□ 2.4
GTF3A-201ENST00000381140 ARID4BQ4LE39 1312 aaPredicted RBP30.03■■■□□ 2.4
GTF3A-201ENST00000381140 ABCA6Q8N139 1617 aa30.03■■■□□ 2.4
GTF3A-201ENST00000381140 PTPN23Q9H3S7 1636 aa30.03■■■□□ 2.4
GTF3A-201ENST00000381140 MBD5Q9P267 1494 aa30.03■■■□□ 2.4
GTF3A-201ENST00000381140 MLH3Q9UHC1 1453 aa30.03■■■□□ 2.4
GTF3A-201ENST00000381140 SPAG9O60271 1321 aaKnown RBP30.03■■■□□ 2.4
GTF3A-201ENST00000381140 DIP2CQ9Y2E4 1556 aa30.01■■■□□ 2.39
GTF3A-201ENST00000381140 ATP10AO60312 1499 aa29.99■■■□□ 2.39
GTF3A-201ENST00000381140 FGD6Q6ZV73 1430 aa29.99■■■□□ 2.39
GTF3A-201ENST00000381140 SIGLEC1Q9BZZ2 1709 aa29.99■■■□□ 2.39
GTF3A-201ENST00000381140 CCDC141Q6ZP82 1450 aa29.99■■■□□ 2.39
GTF3A-201ENST00000381140 ATP7AQ04656 1500 aa29.98■■■□□ 2.39
GTF3A-201ENST00000381140 INO80Q9ULG1 1556 aaPredicted RBP29.97■■■□□ 2.39
GTF3A-201ENST00000381140 ARHGEF5Q12774 1597 aa29.97■■■□□ 2.39
GTF3A-201ENST00000381140 C9orf84Q5VXU9 1444 aa29.96■■■□□ 2.39
GTF3A-201ENST00000381140 KDM4FA0A1W2PPD8 638 aa29.95■■■□□ 2.39
GTF3A-201ENST00000381140 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
GTF3A-201ENST00000381140 RSPH4AQ5TD94 716 aa29.9■■■□□ 2.38
GTF3A-201ENST00000381140 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.37
GTF3A-201ENST00000381140 TCOF1Q13428 1488 aaKnown RBP29.88■■■□□ 2.37
GTF3A-201ENST00000381140 TSPY4P0CV99 314 aa29.87■■■□□ 2.37
GTF3A-201ENST00000381140 TSPY10P0CW01 314 aa29.87■■■□□ 2.37
GTF3A-201ENST00000381140 MLECQ14165 292 aa29.87■■■□□ 2.37
GTF3A-201ENST00000381140 FAM50AQ14320 339 aaKnown RBP29.87■■■□□ 2.37
GTF3A-201ENST00000381140 ADGBQ8N7X0 1667 aa29.86■■■□□ 2.37
GTF3A-201ENST00000381140 CROCC2H7BZ55 1655 aa29.85■■■□□ 2.37
GTF3A-201ENST00000381140 REREQ9P2R6 1566 aa29.85■■■□□ 2.37
GTF3A-201ENST00000381140 ADAMTSL3P82987 1691 aa29.84■■■□□ 2.37
GTF3A-201ENST00000381140 RTEL1-TNFRSF6BF6WH68 1400 aa29.83■■■□□ 2.37
GTF3A-201ENST00000381140 DNMT1P26358 1616 aaKnown RBP29.83■■■□□ 2.37
GTF3A-201ENST00000381140 MADDQ8WXG6 1647 aa29.81■■■□□ 2.36
GTF3A-201ENST00000381140 A2MP01023 1474 aa29.8■■■□□ 2.36
GTF3A-201ENST00000381140 MAST1Q9Y2H9 1570 aa29.8■■■□□ 2.36
GTF3A-201ENST00000381140 ABCC5O15440 1437 aa29.79■■■□□ 2.36
GTF3A-201ENST00000381140 DAPK1P53355 1430 aa29.79■■■□□ 2.36
GTF3A-201ENST00000381140 FER1L4A9Z1Z3 1794 aa29.77■■■□□ 2.36
GTF3A-201ENST00000381140 RIMS1Q86UR5 1692 aaKnown RBP29.77■■■□□ 2.36
GTF3A-201ENST00000381140 AGLP35573 1532 aa29.75■■■□□ 2.35
GTF3A-201ENST00000381140 PLXNC1O60486 1568 aa29.74■■■□□ 2.35
GTF3A-201ENST00000381140 SHANK2Q9UPX8 1470 aa29.72■■■□□ 2.35
GTF3A-201ENST00000381140 CHIC2Q9UKJ5 165 aa29.71■■■□□ 2.35
GTF3A-201ENST00000381140 DHX29Q7Z478 1369 aaKnown RBP29.67■■■□□ 2.34
GTF3A-201ENST00000381140 PLPPR3Q6T4P5 718 aa29.65■■■□□ 2.34
GTF3A-201ENST00000381140 ITGAEP38570 1179 aa29.64■■■□□ 2.34
GTF3A-201ENST00000381140 RRP7BPQ9NSQ0 103 aa29.64■■■□□ 2.33
GTF3A-201ENST00000381140 PTPRMP28827 1452 aa29.63■■■□□ 2.33
GTF3A-201ENST00000381140 GGT6Q6P531 493 aa29.62■■■□□ 2.33
GTF3A-201ENST00000381140 KIF15Q9NS87 1388 aa29.61■■■□□ 2.33
GTF3A-201ENST00000381140 KIF3BO15066 747 aa29.61■■■□□ 2.33
GTF3A-201ENST00000381140 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
GTF3A-201ENST00000381140 ANKRD30AQ9BXX3 1397 aa29.6■■■□□ 2.33
GTF3A-201ENST00000381140 RRBP1Q9P2E9 1410 aaKnown RBP29.6■■■□□ 2.33
GTF3A-201ENST00000381140 DUOX2Q9NRD8 1548 aa29.59■■■□□ 2.33
GTF3A-201ENST00000381140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.32
GTF3A-201ENST00000381140 PTPRKQ15262 1439 aa29.56■■■□□ 2.32
GTF3A-201ENST00000381140 CLTCQ00610 1675 aaKnown RBP29.56■■■□□ 2.32
GTF3A-201ENST00000381140 EIF2AK4Q9P2K8 1649 aaKnown RBP29.55■■■□□ 2.32
GTF3A-201ENST00000381140 ADGRL2O95490 1459 aa29.54■■■□□ 2.32
GTF3A-201ENST00000381140 NCOA1Q15788 1441 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms