RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
SNAPC3-201ENST00000380799 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
SNAPC3-201ENST00000380799 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
SNAPC3-201ENST00000380799 ERBB3P21860 1342 aa11.39□□□□□ -0.59
SNAPC3-201ENST00000380799 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
SNAPC3-201ENST00000380799 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
SNAPC3-201ENST00000380799 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
SNAPC3-201ENST00000380799 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
SNAPC3-201ENST00000380799 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
SNAPC3-201ENST00000380799 KIF3CO14782 793 aa11.33□□□□□ -0.6
SNAPC3-201ENST00000380799 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
SNAPC3-201ENST00000380799 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
SNAPC3-201ENST00000380799 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
SNAPC3-201ENST00000380799 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
SNAPC3-201ENST00000380799 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
SNAPC3-201ENST00000380799 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
SNAPC3-201ENST00000380799 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
SNAPC3-201ENST00000380799 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
SNAPC3-201ENST00000380799 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
SNAPC3-201ENST00000380799 PPP1R37O75864 691 aa11.27□□□□□ -0.61
SNAPC3-201ENST00000380799 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
SNAPC3-201ENST00000380799 SLC34A2O95436 690 aa11.25□□□□□ -0.61
SNAPC3-201ENST00000380799 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
SNAPC3-201ENST00000380799 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
SNAPC3-201ENST00000380799 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNAPC3-201ENST00000380799 PCDHGA4Q9Y5G9 962 aa11.19□□□□□ -0.62
SNAPC3-201ENST00000380799 GPHNQ9NQX3 736 aaPredicted RBP11.17□□□□□ -0.62
SNAPC3-201ENST00000380799 NUDT7P0C024 238 aa11.16□□□□□ -0.62
SNAPC3-201ENST00000380799 FOXK1P85037 733 aa11.16□□□□□ -0.62
SNAPC3-201ENST00000380799 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
SNAPC3-201ENST00000380799 PSDA5PKW4 1024 aaPredicted RBP11.12□□□□□ -0.63
SNAPC3-201ENST00000380799 PTGER2P43116 358 aa11.12□□□□□ -0.63
SNAPC3-201ENST00000380799 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
SNAPC3-201ENST00000380799 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
SNAPC3-201ENST00000380799 PBX2P40425 430 aa11.11□□□□□ -0.63
SNAPC3-201ENST00000380799 TBC1D12O60347 775 aa11.1□□□□□ -0.63
SNAPC3-201ENST00000380799 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
SNAPC3-201ENST00000380799 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
SNAPC3-201ENST00000380799 DSG2Q14126 1118 aa11.08□□□□□ -0.64
SNAPC3-201ENST00000380799 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
SNAPC3-201ENST00000380799 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNAPC3-201ENST00000380799 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
SNAPC3-201ENST00000380799 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
SNAPC3-201ENST00000380799 CRISPLD2Q9H0B8 497 aa11.03□□□□□ -0.64
SNAPC3-201ENST00000380799 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
SNAPC3-201ENST00000380799 PDE4AP27815 886 aa11.02□□□□□ -0.65
SNAPC3-201ENST00000380799 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
SNAPC3-201ENST00000380799 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
SNAPC3-201ENST00000380799 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
SNAPC3-201ENST00000380799 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
SNAPC3-201ENST00000380799 OXER1Q8TDS5 423 aa10.97□□□□□ -0.65
SNAPC3-201ENST00000380799 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
SNAPC3-201ENST00000380799 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
SNAPC3-201ENST00000380799 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
SNAPC3-201ENST00000380799 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
SNAPC3-201ENST00000380799 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
SNAPC3-201ENST00000380799 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
SNAPC3-201ENST00000380799 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
SNAPC3-201ENST00000380799 TK2O00142 265 aa10.9□□□□□ -0.66
SNAPC3-201ENST00000380799 ADGRD1Q6QNK2 874 aa10.9□□□□□ -0.66
SNAPC3-201ENST00000380799 MFSD10Q14728 455 aa10.88□□□□□ -0.67
SNAPC3-201ENST00000380799 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
SNAPC3-201ENST00000380799 PSEN2P49810 448 aa10.85□□□□□ -0.67
SNAPC3-201ENST00000380799 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
SNAPC3-201ENST00000380799 ANO8Q9HCE9 1232 aaPredicted RBP10.84□□□□□ -0.67
SNAPC3-201ENST00000380799 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
SNAPC3-201ENST00000380799 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.68
SNAPC3-201ENST00000380799 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
SNAPC3-201ENST00000380799 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
SNAPC3-201ENST00000380799 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
SNAPC3-201ENST00000380799 EVI5O60447 810 aa10.82□□□□□ -0.68
SNAPC3-201ENST00000380799 FOSBP53539 338 aa10.82□□□□□ -0.68
SNAPC3-201ENST00000380799 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
SNAPC3-201ENST00000380799 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
SNAPC3-201ENST00000380799 HRO43593 1189 aa10.8□□□□□ -0.68
SNAPC3-201ENST00000380799 HCSTQ9UBK5 93 aa10.8□□□□□ -0.68
SNAPC3-201ENST00000380799 PTPREP23469 700 aa10.78□□□□□ -0.68
SNAPC3-201ENST00000380799 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
SNAPC3-201ENST00000380799 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
SNAPC3-201ENST00000380799 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
SNAPC3-201ENST00000380799 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
SNAPC3-201ENST00000380799 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
SNAPC3-201ENST00000380799 VPS9D1Q9Y2B5 631 aa10.75□□□□□ -0.69
SNAPC3-201ENST00000380799 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
SNAPC3-201ENST00000380799 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
SNAPC3-201ENST00000380799 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
SNAPC3-201ENST00000380799 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
SNAPC3-201ENST00000380799 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
SNAPC3-201ENST00000380799 ZBED2Q9BTP6 218 aa10.69□□□□□ -0.7
SNAPC3-201ENST00000380799 PHF14O94880 888 aa10.67□□□□□ -0.7
SNAPC3-201ENST00000380799 TYW1BQ6NUM6 668 aa10.67□□□□□ -0.7
SNAPC3-201ENST00000380799 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
SNAPC3-201ENST00000380799 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
SNAPC3-201ENST00000380799 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
SNAPC3-201ENST00000380799 PLA2G2EQ9NZK7 142 aa10.66□□□□□ -0.7
SNAPC3-201ENST00000380799 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
SNAPC3-201ENST00000380799 MRPL50Q8N5N7 158 aaKnown RBP10.65□□□□□ -0.7
SNAPC3-201ENST00000380799 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
SNAPC3-201ENST00000380799 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
SNAPC3-201ENST00000380799 DPYSL4O14531 572 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms