RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 CLIP1P30622 1438 aa18.92■□□□□ 0.62
TROAP-202ENST00000380327 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
TROAP-202ENST00000380327 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
TROAP-202ENST00000380327 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
TROAP-202ENST00000380327 MAGI2Q86UL8 1455 aa18.91■□□□□ 0.62
TROAP-202ENST00000380327 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
TROAP-202ENST00000380327 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
TROAP-202ENST00000380327 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
TROAP-202ENST00000380327 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
TROAP-202ENST00000380327 CASKIN1Q8WXD9 1431 aa18.87■□□□□ 0.61
TROAP-202ENST00000380327 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
TROAP-202ENST00000380327 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
TROAP-202ENST00000380327 ZNF518AQ6AHZ1 1483 aa18.84■□□□□ 0.61
TROAP-202ENST00000380327 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
TROAP-202ENST00000380327 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.61
TROAP-202ENST00000380327 KDM5CP41229 1560 aa18.82■□□□□ 0.6
TROAP-202ENST00000380327 ILDR1Q86SU0 546 aaPredicted RBP18.82■□□□□ 0.6
TROAP-202ENST00000380327 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
TROAP-202ENST00000380327 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
TROAP-202ENST00000380327 LMTK3Q96Q04 1460 aa18.81■□□□□ 0.6
TROAP-202ENST00000380327 ATP10AO60312 1499 aa18.8■□□□□ 0.6
TROAP-202ENST00000380327 ABCC1P33527 1531 aa18.78■□□□□ 0.6
TROAP-202ENST00000380327 MLECQ14165 292 aa18.77■□□□□ 0.6
TROAP-202ENST00000380327 ITSN2Q9NZM3 1697 aa18.76■□□□□ 0.59
TROAP-202ENST00000380327 ARHGEF12Q9NZN5 1544 aa18.76■□□□□ 0.59
TROAP-202ENST00000380327 CDC42BPAQ5VT25 1732 aa18.76■□□□□ 0.59
TROAP-202ENST00000380327 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
TROAP-202ENST00000380327 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
TROAP-202ENST00000380327 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
TROAP-202ENST00000380327 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
TROAP-202ENST00000380327 AFAP1Q8N556 730 aa18.72■□□□□ 0.59
TROAP-202ENST00000380327 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.59
TROAP-202ENST00000380327 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
TROAP-202ENST00000380327 TRAPPC8Q9Y2L5 1435 aa18.69■□□□□ 0.58
TROAP-202ENST00000380327 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
TROAP-202ENST00000380327 SAMD9LQ8IVG5 1584 aa18.68■□□□□ 0.58
TROAP-202ENST00000380327 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
TROAP-202ENST00000380327 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
TROAP-202ENST00000380327 HSPA2P54652 639 aa18.65■□□□□ 0.58
TROAP-202ENST00000380327 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
TROAP-202ENST00000380327 AGLP35573 1532 aa18.63■□□□□ 0.57
TROAP-202ENST00000380327 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
TROAP-202ENST00000380327 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
TROAP-202ENST00000380327 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
TROAP-202ENST00000380327 C3P01024 1663 aa18.6■□□□□ 0.57
TROAP-202ENST00000380327 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
TROAP-202ENST00000380327 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
TROAP-202ENST00000380327 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
TROAP-202ENST00000380327 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.57
TROAP-202ENST00000380327 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
TROAP-202ENST00000380327 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
TROAP-202ENST00000380327 ATP7AQ04656 1500 aa18.58■□□□□ 0.56
TROAP-202ENST00000380327 UHRF1BP1Q6BDS2 1440 aa18.57■□□□□ 0.56
TROAP-202ENST00000380327 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
TROAP-202ENST00000380327 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
TROAP-202ENST00000380327 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
TROAP-202ENST00000380327 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
TROAP-202ENST00000380327 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
TROAP-202ENST00000380327 SUPT6HQ7KZ85 1726 aaKnown RBP18.54■□□□□ 0.56
TROAP-202ENST00000380327 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
TROAP-202ENST00000380327 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.56
TROAP-202ENST00000380327 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
TROAP-202ENST00000380327 MROH2AA6NES4 1674 aa18.51■□□□□ 0.55
TROAP-202ENST00000380327 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
TROAP-202ENST00000380327 A2MP01023 1474 aa18.48■□□□□ 0.55
TROAP-202ENST00000380327 STRCQ7RTU9 1775 aa18.47■□□□□ 0.55
TROAP-202ENST00000380327 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
TROAP-202ENST00000380327 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
TROAP-202ENST00000380327 MBD5Q9P267 1494 aa18.44■□□□□ 0.54
TROAP-202ENST00000380327 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
TROAP-202ENST00000380327 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
TROAP-202ENST00000380327 NPATQ14207 1427 aa18.42■□□□□ 0.54
TROAP-202ENST00000380327 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
TROAP-202ENST00000380327 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
TROAP-202ENST00000380327 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
TROAP-202ENST00000380327 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
TROAP-202ENST00000380327 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
TROAP-202ENST00000380327 CERKQ8TCT0 537 aa18.39■□□□□ 0.53
TROAP-202ENST00000380327 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
TROAP-202ENST00000380327 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
TROAP-202ENST00000380327 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
TROAP-202ENST00000380327 NCOA1Q15788 1441 aa18.37■□□□□ 0.53
TROAP-202ENST00000380327 PTPRTO14522 1441 aa18.36■□□□□ 0.53
TROAP-202ENST00000380327 CAMSAP1Q5T5Y3 1602 aa18.36■□□□□ 0.53
TROAP-202ENST00000380327 GGT6Q6P531 493 aa18.36■□□□□ 0.53
TROAP-202ENST00000380327 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
TROAP-202ENST00000380327 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
TROAP-202ENST00000380327 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
TROAP-202ENST00000380327 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
TROAP-202ENST00000380327 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
TROAP-202ENST00000380327 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
TROAP-202ENST00000380327 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
TROAP-202ENST00000380327 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
TROAP-202ENST00000380327 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
TROAP-202ENST00000380327 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
TROAP-202ENST00000380327 PLA2R1Q13018 1463 aa18.27■□□□□ 0.52
TROAP-202ENST00000380327 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
TROAP-202ENST00000380327 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.51
TROAP-202ENST00000380327 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
TROAP-202ENST00000380327 KIF3BO15066 747 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms