RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
NPHP4-202ENST00000378161 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-202ENST00000378161 PDE4AP27815 886 aa15.12■□□□□ 0.01
NPHP4-202ENST00000378161 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
NPHP4-202ENST00000378161 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
NPHP4-202ENST00000378161 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
NPHP4-202ENST00000378161 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
NPHP4-202ENST00000378161 GZF1Q9H116 711 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-202ENST00000378161 RRP7BPQ9NSQ0 103 aa15.1■□□□□ 0.01
NPHP4-202ENST00000378161 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
NPHP4-202ENST00000378161 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-202ENST00000378161 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0.01
NPHP4-202ENST00000378161 TULP1O00294 542 aaPredicted RBP15.08■□□□□ 0
NPHP4-202ENST00000378161 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
NPHP4-202ENST00000378161 CLCN1P35523 988 aa15.07■□□□□ 0
NPHP4-202ENST00000378161 SLC4A3P48751 1232 aa15.07■□□□□ 0
NPHP4-202ENST00000378161 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
NPHP4-202ENST00000378161 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
NPHP4-202ENST00000378161 RAB3GAP2Q9H2M9 1393 aa15.07■□□□□ 0
NPHP4-202ENST00000378161 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
NPHP4-202ENST00000378161 RAPGEF2Q9Y4G8 1499 aa15.06■□□□□ 0
NPHP4-202ENST00000378161 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
NPHP4-202ENST00000378161 SMARCA4P51532 1647 aa15.06■□□□□ 0
NPHP4-202ENST00000378161 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
NPHP4-202ENST00000378161 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ 0
NPHP4-202ENST00000378161 KIAA1211Q6ZU35 1233 aa15.04■□□□□ -0
NPHP4-202ENST00000378161 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
NPHP4-202ENST00000378161 SMARCA2P51531 1590 aa15.04■□□□□ -0
NPHP4-202ENST00000378161 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
NPHP4-202ENST00000378161 CUX2O14529 1486 aa15.03■□□□□ -0
NPHP4-202ENST00000378161 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
NPHP4-202ENST00000378161 ESPNB1AK53 854 aa15.02■□□□□ -0
NPHP4-202ENST00000378161 SMAP1Q8IYB5 467 aaPredicted RBP15.02□□□□□ -0.01
NPHP4-202ENST00000378161 RRAGDQ9NQL2 400 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-202ENST00000378161 PTMAP06454 111 aaKnown RBP14.99□□□□□ -0.01
NPHP4-202ENST00000378161 MS4A1P11836 297 aa14.99□□□□□ -0.01
NPHP4-202ENST00000378161 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
NPHP4-202ENST00000378161 AEBP1Q8IUX7 1158 aa14.98□□□□□ -0.01
NPHP4-202ENST00000378161 SLKQ9H2G2 1235 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-202ENST00000378161 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-202ENST00000378161 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
NPHP4-202ENST00000378161 MRE11P49959 708 aa14.96□□□□□ -0.01
NPHP4-202ENST00000378161 ARHGAP35Q9NRY4 1499 aa14.96□□□□□ -0.01
NPHP4-202ENST00000378161 E9PSI1 815 aa14.96□□□□□ -0.02
NPHP4-202ENST00000378161 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
NPHP4-202ENST00000378161 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
NPHP4-202ENST00000378161 GOLGA6L22H0YM25 854 aa14.95□□□□□ -0.02
NPHP4-202ENST00000378161 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
NPHP4-202ENST00000378161 ZFP91Q96JP5 570 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-202ENST00000378161 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-202ENST00000378161 HSP90B1P14625 803 aaKnown RBP14.93□□□□□ -0.02
NPHP4-202ENST00000378161 CCDC66A2RUB6 948 aa14.93□□□□□ -0.02
NPHP4-202ENST00000378161 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-202ENST00000378161 ATAD2BQ9ULI0 1458 aa14.92□□□□□ -0.02
NPHP4-202ENST00000378161 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
NPHP4-202ENST00000378161 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
NPHP4-202ENST00000378161 CGNQ9P2M7 1197 aaKnown RBP14.91□□□□□ -0.02
NPHP4-202ENST00000378161 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
NPHP4-202ENST00000378161 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
NPHP4-202ENST00000378161 CSPP1Q1MSJ5 1256 aa14.89□□□□□ -0.03
NPHP4-202ENST00000378161 CHAF1AQ13111 956 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-202ENST00000378161 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
NPHP4-202ENST00000378161 STAC3Q96MF2 364 aa14.89□□□□□ -0.03
NPHP4-202ENST00000378161 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-202ENST00000378161 CLGNO14967 610 aa14.87□□□□□ -0.03
NPHP4-202ENST00000378161 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
NPHP4-202ENST00000378161 KIF20AO95235 890 aa14.87□□□□□ -0.03
NPHP4-202ENST00000378161 DCAF11Q8TEB1 546 aa14.86□□□□□ -0.03
NPHP4-202ENST00000378161 POGKQ9P215 609 aa14.86□□□□□ -0.03
NPHP4-202ENST00000378161 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-202ENST00000378161 BACH2Q9BYV9 841 aa14.85□□□□□ -0.03
NPHP4-202ENST00000378161 CC2D1BQ5T0F9 858 aaKnown RBP14.85□□□□□ -0.03
NPHP4-202ENST00000378161 UQCRHLA0A096LP55 91 aa14.85□□□□□ -0.03
NPHP4-202ENST00000378161 UQCRHP07919 91 aa14.85□□□□□ -0.03
NPHP4-202ENST00000378161 GTPBP4Q9BZE4 634 aaKnown RBP14.85□□□□□ -0.03
NPHP4-202ENST00000378161 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
NPHP4-202ENST00000378161 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
NPHP4-202ENST00000378161 KIF21BO75037 1637 aa14.84□□□□□ -0.03
NPHP4-202ENST00000378161 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-202ENST00000378161 DNAJC2Q99543 621 aaKnown RBP14.83□□□□□ -0.03
NPHP4-202ENST00000378161 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.04
NPHP4-202ENST00000378161 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
NPHP4-202ENST00000378161 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
NPHP4-202ENST00000378161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPHP4-202ENST00000378161 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
NPHP4-202ENST00000378161 FAM193AP78312 1265 aa14.79□□□□□ -0.04
NPHP4-202ENST00000378161 TSPYL1Q9H0U9 437 aa14.79□□□□□ -0.04
NPHP4-202ENST00000378161 DDX11L8A8MPP1 907 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
NPHP4-202ENST00000378161 PLEKHD1A6NEE1 506 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 KCNJ4P48050 445 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 CBX1P83916 185 aa14.78□□□□□ -0.04
NPHP4-202ENST00000378161 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.04
NPHP4-202ENST00000378161 SECISBP2LQ93073 1101 aaKnown RBP14.77□□□□□ -0.05
NPHP4-202ENST00000378161 FAM161AQ3B820 660 aa14.76□□□□□ -0.05
NPHP4-202ENST00000378161 UTP14CQ5TAP6 766 aaKnown RBP14.76□□□□□ -0.05
NPHP4-202ENST00000378161 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
NPHP4-202ENST00000378161 HDAC5Q9UQL6 1122 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms