RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 NEUROD1Q13562 356 aa16.21■□□□□ 0.19
SEC23B-203ENST00000377465 RIMBP3CA6NJZ7 1639 aa16.21■□□□□ 0.19
SEC23B-203ENST00000377465 RIMBP3BA6NNM3 1639 aa16.21■□□□□ 0.19
SEC23B-203ENST00000377465 RIMBP3Q9UFD9 1639 aa16.21■□□□□ 0.19
SEC23B-203ENST00000377465 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
SEC23B-203ENST00000377465 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
SEC23B-203ENST00000377465 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
SEC23B-203ENST00000377465 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
SEC23B-203ENST00000377465 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
SEC23B-203ENST00000377465 GLI2P10070 1586 aa16.17■□□□□ 0.18
SEC23B-203ENST00000377465 WDR7Q9Y4E6 1490 aa16.17■□□□□ 0.18
SEC23B-203ENST00000377465 CFAP74Q9C0B2 1584 aa16.16■□□□□ 0.18
SEC23B-203ENST00000377465 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
SEC23B-203ENST00000377465 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
SEC23B-203ENST00000377465 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
SEC23B-203ENST00000377465 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
SEC23B-203ENST00000377465 DAPK1P53355 1430 aa16.13■□□□□ 0.17
SEC23B-203ENST00000377465 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
SEC23B-203ENST00000377465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
SEC23B-203ENST00000377465 ABCC1P33527 1531 aa16.11■□□□□ 0.17
SEC23B-203ENST00000377465 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
SEC23B-203ENST00000377465 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
SEC23B-203ENST00000377465 MAP3K4Q9Y6R4 1608 aa16.1■□□□□ 0.17
SEC23B-203ENST00000377465 ABCC5O15440 1437 aa16.1■□□□□ 0.17
SEC23B-203ENST00000377465 PLCH2O75038 1416 aa16.1■□□□□ 0.17
SEC23B-203ENST00000377465 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
SEC23B-203ENST00000377465 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
SEC23B-203ENST00000377465 NAIPQ13075 1403 aa16.08■□□□□ 0.16
SEC23B-203ENST00000377465 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
SEC23B-203ENST00000377465 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
SEC23B-203ENST00000377465 INO80Q9ULG1 1556 aaPredicted RBP16.03■□□□□ 0.16
SEC23B-203ENST00000377465 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
SEC23B-203ENST00000377465 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
SEC23B-203ENST00000377465 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
SEC23B-203ENST00000377465 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.16
SEC23B-203ENST00000377465 UNC13BO14795 1591 aa16.01■□□□□ 0.15
SEC23B-203ENST00000377465 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
SEC23B-203ENST00000377465 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
SEC23B-203ENST00000377465 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
SEC23B-203ENST00000377465 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SEC23B-203ENST00000377465 KDM5CP41229 1560 aa15.99■□□□□ 0.15
SEC23B-203ENST00000377465 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
SEC23B-203ENST00000377465 KDM6BO15054 1643 aa15.98■□□□□ 0.15
SEC23B-203ENST00000377465 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
SEC23B-203ENST00000377465 MAGI2Q86UL8 1455 aa15.98■□□□□ 0.15
SEC23B-203ENST00000377465 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
SEC23B-203ENST00000377465 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
SEC23B-203ENST00000377465 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
SEC23B-203ENST00000377465 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
SEC23B-203ENST00000377465 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
SEC23B-203ENST00000377465 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
SEC23B-203ENST00000377465 PPRC1Q5VV67 1664 aaKnown RBP15.96■□□□□ 0.15
SEC23B-203ENST00000377465 ARHGEF12Q9NZN5 1544 aa15.96■□□□□ 0.14
SEC23B-203ENST00000377465 NEO1Q92859 1461 aa15.95■□□□□ 0.14
SEC23B-203ENST00000377465 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
SEC23B-203ENST00000377465 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
SEC23B-203ENST00000377465 DENND4BO75064 1496 aaPredicted RBP15.92■□□□□ 0.14
SEC23B-203ENST00000377465 KIF13AQ9H1H9 1805 aa15.91■□□□□ 0.14
SEC23B-203ENST00000377465 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
SEC23B-203ENST00000377465 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
SEC23B-203ENST00000377465 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
SEC23B-203ENST00000377465 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
SEC23B-203ENST00000377465 ERBINQ96RT1 1412 aa15.89■□□□□ 0.13
SEC23B-203ENST00000377465 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
SEC23B-203ENST00000377465 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
SEC23B-203ENST00000377465 FANCAO15360 1455 aa15.88■□□□□ 0.13
SEC23B-203ENST00000377465 VWDEQ8N2E2 1590 aa15.87■□□□□ 0.13
SEC23B-203ENST00000377465 ANKRD30AQ9BXX3 1397 aa15.87■□□□□ 0.13
SEC23B-203ENST00000377465 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
SEC23B-203ENST00000377465 RNF17Q9BXT8 1623 aaKnown RBP15.87■□□□□ 0.13
SEC23B-203ENST00000377465 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
SEC23B-203ENST00000377465 PZPP20742 1482 aa15.84■□□□□ 0.13
SEC23B-203ENST00000377465 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
SEC23B-203ENST00000377465 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
SEC23B-203ENST00000377465 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
SEC23B-203ENST00000377465 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
SEC23B-203ENST00000377465 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.13
SEC23B-203ENST00000377465 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
SEC23B-203ENST00000377465 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
SEC23B-203ENST00000377465 POGZQ7Z3K3 1410 aa15.81■□□□□ 0.12
SEC23B-203ENST00000377465 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
SEC23B-203ENST00000377465 EFCAB2Q5VUJ9 269 aa15.81■□□□□ 0.12
SEC23B-203ENST00000377465 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
SEC23B-203ENST00000377465 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
SEC23B-203ENST00000377465 MROH1Q8NDA8 1641 aa15.8■□□□□ 0.12
SEC23B-203ENST00000377465 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
SEC23B-203ENST00000377465 ANKRD50Q9ULJ7 1429 aa15.79■□□□□ 0.12
SEC23B-203ENST00000377465 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
SEC23B-203ENST00000377465 ITGAEP38570 1179 aa15.79■□□□□ 0.12
SEC23B-203ENST00000377465 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
SEC23B-203ENST00000377465 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
SEC23B-203ENST00000377465 ATP10AO60312 1499 aa15.78■□□□□ 0.12
SEC23B-203ENST00000377465 LMTK2Q8IWU2 1503 aa15.78■□□□□ 0.12
SEC23B-203ENST00000377465 PRKCSHP14314 528 aaPredicted RBP15.78■□□□□ 0.12
SEC23B-203ENST00000377465 TEX14Q8IWB6 1497 aa15.75■□□□□ 0.11
SEC23B-203ENST00000377465 ZC3H13Q5T200 1668 aaKnown RBP15.75■□□□□ 0.11
SEC23B-203ENST00000377465 ABCA6Q8N139 1617 aa15.75■□□□□ 0.11
SEC23B-203ENST00000377465 TET3O43151 1660 aa15.75■□□□□ 0.11
SEC23B-203ENST00000377465 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
SEC23B-203ENST00000377465 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms