RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 FGD6Q6ZV73 1430 aa32.89■■■□□ 2.86
CBWD3-202ENST00000377342 ARHGAP5Q13017 1502 aa32.88■■■□□ 2.85
CBWD3-202ENST00000377342 PTPN23Q9H3S7 1636 aa32.85■■■□□ 2.85
CBWD3-202ENST00000377342 MIA2Q96PC5 1412 aa32.85■■■□□ 2.85
CBWD3-202ENST00000377342 SAMD9LQ8IVG5 1584 aa32.84■■■□□ 2.85
CBWD3-202ENST00000377342 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.84
CBWD3-202ENST00000377342 CFAP74Q9C0B2 1584 aa32.81■■■□□ 2.84
CBWD3-202ENST00000377342 FANCAO15360 1455 aa32.81■■■□□ 2.84
CBWD3-202ENST00000377342 CAMSAP2Q08AD1 1489 aa32.79■■■□□ 2.84
CBWD3-202ENST00000377342 TCOF1Q13428 1488 aaKnown RBP32.79■■■□□ 2.84
CBWD3-202ENST00000377342 CFDP1Q9UEE9 299 aaPredicted RBP32.78■■■□□ 2.84
CBWD3-202ENST00000377342 ABCC1P33527 1531 aa32.75■■■□□ 2.83
CBWD3-202ENST00000377342 TRHP20396 242 aaPredicted RBP32.75■■■□□ 2.83
CBWD3-202ENST00000377342 TEX14Q8IWB6 1497 aa32.72■■■□□ 2.83
CBWD3-202ENST00000377342 NEO1Q92859 1461 aa32.72■■■□□ 2.83
CBWD3-202ENST00000377342 ZNF644Q9H582 1327 aaPredicted RBP32.72■■■□□ 2.83
CBWD3-202ENST00000377342 EFCAB2Q5VUJ9 269 aa32.69■■■□□ 2.82
CBWD3-202ENST00000377342 SYCP2Q9BX26 1530 aa32.69■■■□□ 2.82
CBWD3-202ENST00000377342 ZNF777Q9ULD5 760 aaPredicted RBP32.67■■■□□ 2.82
CBWD3-202ENST00000377342 ARHGEF12Q9NZN5 1544 aa32.67■■■□□ 2.82
CBWD3-202ENST00000377342 AKNAQ7Z591 1439 aa32.66■■■□□ 2.82
CBWD3-202ENST00000377342 ADGRL1O94910 1474 aa32.65■■■□□ 2.82
CBWD3-202ENST00000377342 PLEKHH2Q8IVE3 1493 aa32.64■■■□□ 2.82
CBWD3-202ENST00000377342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.63■■■□□ 2.81
CBWD3-202ENST00000377342 DNMT1P26358 1616 aaKnown RBP32.63■■■□□ 2.81
CBWD3-202ENST00000377342 MBD5Q9P267 1494 aa32.62■■■□□ 2.81
CBWD3-202ENST00000377342 KIAA1107Q9UPP5 1409 aa32.62■■■□□ 2.81
CBWD3-202ENST00000377342 ARHGEF5Q12774 1597 aa32.62■■■□□ 2.81
CBWD3-202ENST00000377342 CROCC2H7BZ55 1655 aa32.61■■■□□ 2.81
CBWD3-202ENST00000377342 FAM50AQ14320 339 aaKnown RBP32.59■■■□□ 2.81
CBWD3-202ENST00000377342 RICTORQ6R327 1708 aa32.56■■■□□ 2.8
CBWD3-202ENST00000377342 SCAPERQ9BY12 1400 aa32.56■■■□□ 2.8
CBWD3-202ENST00000377342 FRMPD1Q5SYB0 1578 aa32.55■■■□□ 2.8
CBWD3-202ENST00000377342 TRAPPC8Q9Y2L5 1435 aa32.53■■■□□ 2.8
CBWD3-202ENST00000377342 CCDC141Q6ZP82 1450 aa32.52■■■□□ 2.8
CBWD3-202ENST00000377342 DAPK1P53355 1430 aa32.52■■■□□ 2.8
CBWD3-202ENST00000377342 POGZQ7Z3K3 1410 aa32.52■■■□□ 2.8
CBWD3-202ENST00000377342 HNRNPMP52272 730 aaKnown RBP eCLIP32.51■■■□□ 2.79
CBWD3-202ENST00000377342 ABCC5O15440 1437 aa32.51■■■□□ 2.79
CBWD3-202ENST00000377342 KDM5CP41229 1560 aa32.49■■■□□ 2.79
CBWD3-202ENST00000377342 COL17A1Q9UMD9 1497 aaPredicted RBP32.49■■■□□ 2.79
CBWD3-202ENST00000377342 DENND4BO75064 1496 aaPredicted RBP32.48■■■□□ 2.79
CBWD3-202ENST00000377342 PTPRKQ15262 1439 aa32.47■■■□□ 2.79
CBWD3-202ENST00000377342 ZNF518AQ6AHZ1 1483 aa32.46■■■□□ 2.79
CBWD3-202ENST00000377342 TRIM26Q12899 539 aaPredicted RBP32.46■■■□□ 2.79
CBWD3-202ENST00000377342 SHANK2Q9UPX8 1470 aa32.45■■■□□ 2.79
CBWD3-202ENST00000377342 MAST1Q9Y2H9 1570 aa32.44■■■□□ 2.78
CBWD3-202ENST00000377342 INO80Q9ULG1 1556 aaPredicted RBP32.43■■■□□ 2.78
CBWD3-202ENST00000377342 ADGBQ8N7X0 1667 aa32.43■■■□□ 2.78
CBWD3-202ENST00000377342 KDM6BO15054 1643 aa32.42■■■□□ 2.78
CBWD3-202ENST00000377342 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
CBWD3-202ENST00000377342 ZFYVE16Q7Z3T8 1539 aa32.41■■■□□ 2.78
CBWD3-202ENST00000377342 C9orf84Q5VXU9 1444 aa32.38■■■□□ 2.77
CBWD3-202ENST00000377342 HECW2Q9P2P5 1572 aa32.38■■■□□ 2.77
CBWD3-202ENST00000377342 AFAP1Q8N556 730 aa32.38■■■□□ 2.77
CBWD3-202ENST00000377342 ITGAEP38570 1179 aa32.37■■■□□ 2.77
CBWD3-202ENST00000377342 KIDINS220Q9ULH0 1771 aa32.37■■■□□ 2.77
CBWD3-202ENST00000377342 RAPGEF3O95398 923 aa32.37■■■□□ 2.77
CBWD3-202ENST00000377342 RSPH4AQ5TD94 716 aa32.37■■■□□ 2.77
CBWD3-202ENST00000377342 ATP7AQ04656 1500 aa32.35■■■□□ 2.77
CBWD3-202ENST00000377342 ADGRL2O95490 1459 aa32.34■■■□□ 2.77
CBWD3-202ENST00000377342 PLXNC1O60486 1568 aa32.33■■■□□ 2.77
CBWD3-202ENST00000377342 MLH3Q9UHC1 1453 aa32.31■■■□□ 2.76
CBWD3-202ENST00000377342 ABCA6Q8N139 1617 aa32.29■■■□□ 2.76
CBWD3-202ENST00000377342 RTEL1-TNFRSF6BF6WH68 1400 aa32.28■■■□□ 2.76
CBWD3-202ENST00000377342 SPAG9O60271 1321 aaKnown RBP32.27■■■□□ 2.76
CBWD3-202ENST00000377342 CHIC2Q9UKJ5 165 aa32.26■■■□□ 2.75
CBWD3-202ENST00000377342 GCC2Q8IWJ2 1684 aa32.26■■■□□ 2.75
CBWD3-202ENST00000377342 TSPY4P0CV99 314 aa32.25■■■□□ 2.75
CBWD3-202ENST00000377342 TSPY10P0CW01 314 aa32.25■■■□□ 2.75
CBWD3-202ENST00000377342 ROCK1Q13464 1354 aa32.25■■■□□ 2.75
CBWD3-202ENST00000377342 DIP2CQ9Y2E4 1556 aa32.24■■■□□ 2.75
CBWD3-202ENST00000377342 NCOA1Q15788 1441 aa32.24■■■□□ 2.75
CBWD3-202ENST00000377342 MAGI2Q86UL8 1455 aa32.22■■■□□ 2.75
CBWD3-202ENST00000377342 ARHGEF40Q8TER5 1519 aa32.22■■■□□ 2.75
CBWD3-202ENST00000377342 YEATS2Q9ULM3 1422 aa32.21■■■□□ 2.75
CBWD3-202ENST00000377342 ANKRD30AQ9BXX3 1397 aa32.19■■■□□ 2.74
CBWD3-202ENST00000377342 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
CBWD3-202ENST00000377342 HFM1A2PYH4 1435 aa32.17■■■□□ 2.74
CBWD3-202ENST00000377342 KIF15Q9NS87 1388 aa32.16■■■□□ 2.74
CBWD3-202ENST00000377342 NAIPQ13075 1403 aa32.15■■■□□ 2.74
CBWD3-202ENST00000377342 RRP7BPQ9NSQ0 103 aa32.13■■■□□ 2.73
CBWD3-202ENST00000377342 DUOX2Q9NRD8 1548 aa32.11■■■□□ 2.73
CBWD3-202ENST00000377342 SIGLEC1Q9BZZ2 1709 aa32.09■■■□□ 2.73
CBWD3-202ENST00000377342 REREQ9P2R6 1566 aa32.09■■■□□ 2.73
CBWD3-202ENST00000377342 MYT1LQ9UL68 1186 aa32.08■■■□□ 2.73
CBWD3-202ENST00000377342 A2MP01023 1474 aa32.06■■■□□ 2.72
CBWD3-202ENST00000377342 ATP10AO60312 1499 aa32.04■■■□□ 2.72
CBWD3-202ENST00000377342 EIF2AK4Q9P2K8 1649 aaKnown RBP32.04■■■□□ 2.72
CBWD3-202ENST00000377342 ERBINQ96RT1 1412 aa32.03■■■□□ 2.72
CBWD3-202ENST00000377342 ANKRD50Q9ULJ7 1429 aa32.03■■■□□ 2.72
CBWD3-202ENST00000377342 BCORL1Q5H9F3 1711 aa32.02■■■□□ 2.72
CBWD3-202ENST00000377342 SETD5Q9C0A6 1442 aa32.02■■■□□ 2.72
CBWD3-202ENST00000377342 DHX29Q7Z478 1369 aaKnown RBP32■■■□□ 2.71
CBWD3-202ENST00000377342 RAB3GAP2Q9H2M9 1393 aa31.97■■■□□ 2.71
CBWD3-202ENST00000377342 DEPDC5O75140 1603 aa31.95■■■□□ 2.7
CBWD3-202ENST00000377342 RNF17Q9BXT8 1623 aaKnown RBP31.94■■■□□ 2.7
CBWD3-202ENST00000377342 AGLP35573 1532 aa31.94■■■□□ 2.7
CBWD3-202ENST00000377342 UNC13BO14795 1591 aa31.93■■■□□ 2.7
CBWD3-202ENST00000377342 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms