RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 ISY1Q9ULR0 285 aaKnown RBP28.95■■■□□ 2.23
FOXP4-204ENST00000373063 SUPT16HQ9Y5B9 1047 aaKnown RBP28.95■■■□□ 2.22
FOXP4-204ENST00000373063 RGS3P49796 1198 aa28.95■■■□□ 2.22
FOXP4-204ENST00000373063 FOXD1Q16676 465 aa28.93■■■□□ 2.22
FOXP4-204ENST00000373063 NUP155O75694 1391 aa28.9■■■□□ 2.22
FOXP4-204ENST00000373063 TMX4Q9H1E5 349 aaPredicted RBP28.89■■■□□ 2.22
FOXP4-204ENST00000373063 ANKRD30AQ9BXX3 1397 aa28.89■■■□□ 2.22
FOXP4-204ENST00000373063 FMN1Q68DA7 1419 aa28.88■■■□□ 2.21
FOXP4-204ENST00000373063 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
FOXP4-204ENST00000373063 HNRNPMP52272 730 aaKnown RBP eCLIP28.87■■■□□ 2.21
FOXP4-204ENST00000373063 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
FOXP4-204ENST00000373063 NUTM2DQ5VT03 806 aaPredicted RBP28.87■■■□□ 2.21
FOXP4-204ENST00000373063 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
FOXP4-204ENST00000373063 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
FOXP4-204ENST00000373063 ANP32EQ9BTT0 268 aa28.86■■■□□ 2.21
FOXP4-204ENST00000373063 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
FOXP4-204ENST00000373063 TRIM44Q96DX7 344 aaPredicted RBP28.85■■■□□ 2.21
FOXP4-204ENST00000373063 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
FOXP4-204ENST00000373063 PTMAP06454 111 aaKnown RBP28.84■■■□□ 2.21
FOXP4-204ENST00000373063 NGDNQ8NEJ9 315 aaKnown RBP28.81■■■□□ 2.2
FOXP4-204ENST00000373063 HSP90AB1P08238 724 aaKnown RBP28.79■■■□□ 2.2
FOXP4-204ENST00000373063 EIF3AQ14152 1382 aaKnown RBP28.79■■■□□ 2.2
FOXP4-204ENST00000373063 KTN1Q86UP2 1357 aaKnown RBP28.78■■■□□ 2.2
FOXP4-204ENST00000373063 HSPA5P11021 654 aaKnown RBP28.78■■■□□ 2.2
FOXP4-204ENST00000373063 CLSTN1O94985 981 aa28.77■■■□□ 2.2
FOXP4-204ENST00000373063 U2AF1L5P0DN76 240 aaPredicted RBP28.77■■■□□ 2.2
FOXP4-204ENST00000373063 U2AF1Q01081 240 aaKnown RBP eCLIP28.77■■■□□ 2.2
FOXP4-204ENST00000373063 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
FOXP4-204ENST00000373063 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.19
FOXP4-204ENST00000373063 CALD1Q05682 793 aaKnown RBP28.74■■■□□ 2.19
FOXP4-204ENST00000373063 MPHOSPH9Q99550 1183 aa28.74■■■□□ 2.19
FOXP4-204ENST00000373063 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
FOXP4-204ENST00000373063 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
FOXP4-204ENST00000373063 KANK4Q5T7N3 995 aaPredicted RBP28.73■■■□□ 2.19
FOXP4-204ENST00000373063 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
FOXP4-204ENST00000373063 MCCP23508 829 aa28.71■■■□□ 2.19
FOXP4-204ENST00000373063 APBB1O00213 710 aa28.71■■■□□ 2.19
FOXP4-204ENST00000373063 TERF2IPQ9NYB0 399 aa28.7■■■□□ 2.19
FOXP4-204ENST00000373063 NUTM2FA1L443 756 aa28.7■■■□□ 2.18
FOXP4-204ENST00000373063 PLCB2Q00722 1185 aa28.68■■■□□ 2.18
FOXP4-204ENST00000373063 TIMELESSQ9UNS1 1208 aa28.68■■■□□ 2.18
FOXP4-204ENST00000373063 IPO8O15397 1037 aaKnown RBP28.67■■■□□ 2.18
FOXP4-204ENST00000373063 PPP4R2Q9NY27 417 aa28.66■■■□□ 2.18
FOXP4-204ENST00000373063 AMPHP49418 695 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 CHMP3Q9Y3E7 222 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 G3V3G9 751 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 DCAF8Q5TAQ9 597 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 CCDC18Q5T9S5 1454 aa28.65■■■□□ 2.18
FOXP4-204ENST00000373063 LTV1Q96GA3 475 aaPredicted RBP28.64■■■□□ 2.18
FOXP4-204ENST00000373063 FHOD3Q2V2M9 1422 aa28.64■■■□□ 2.17
FOXP4-204ENST00000373063 OSCARQ8IYS5 282 aa28.64■■■□□ 2.17
FOXP4-204ENST00000373063 GOLGA6L4A6NEF3 574 aa28.63■■■□□ 2.17
FOXP4-204ENST00000373063 RAPGEF2Q9Y4G8 1499 aa28.63■■■□□ 2.17
FOXP4-204ENST00000373063 TAF7LQ5H9L4 462 aa28.63■■■□□ 2.17
FOXP4-204ENST00000373063 GOLGA6L6A8MZA4 724 aa28.62■■■□□ 2.17
FOXP4-204ENST00000373063 STK31Q9BXU1 1019 aa28.61■■■□□ 2.17
FOXP4-204ENST00000373063 GNL2Q13823 731 aaKnown RBP28.6■■■□□ 2.17
FOXP4-204ENST00000373063 GORABQ5T7V8 394 aa28.6■■■□□ 2.17
FOXP4-204ENST00000373063 CHMP4AQ9BY43 222 aa28.6■■■□□ 2.17
FOXP4-204ENST00000373063 DNTTIP2Q5QJE6 756 aaKnown RBP28.59■■■□□ 2.17
FOXP4-204ENST00000373063 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
FOXP4-204ENST00000373063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.59■■■□□ 2.17
FOXP4-204ENST00000373063 KIAA1211Q6ZU35 1233 aa28.56■■■□□ 2.16
FOXP4-204ENST00000373063 NCBP3Q53F19 620 aaKnown RBP28.56■■■□□ 2.16
FOXP4-204ENST00000373063 HSCBQ8IWL3 235 aa28.56■■■□□ 2.16
FOXP4-204ENST00000373063 ITPRIPQ8IWB1 547 aa28.55■■■□□ 2.16
FOXP4-204ENST00000373063 GLIPR1L2Q4G1C9 344 aa28.54■■■□□ 2.16
FOXP4-204ENST00000373063 WIZO95785 1651 aa28.53■■■□□ 2.16
FOXP4-204ENST00000373063 CFAP44Q96MT7 982 aa28.53■■■□□ 2.16
FOXP4-204ENST00000373063 EVA1CP58658 441 aa28.52■■■□□ 2.16
FOXP4-204ENST00000373063 TRAK1Q9UPV9 953 aa28.52■■■□□ 2.16
FOXP4-204ENST00000373063 GTF2E1P29083 439 aaPredicted RBP28.51■■■□□ 2.15
FOXP4-204ENST00000373063 PTPRGP23470 1445 aa28.51■■■□□ 2.15
FOXP4-204ENST00000373063 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
FOXP4-204ENST00000373063 RALBP1Q15311 655 aa28.5■■■□□ 2.15
FOXP4-204ENST00000373063 MEX3CQ5U5Q3 659 aaKnown RBP28.49■■■□□ 2.15
FOXP4-204ENST00000373063 B4GALNT3Q6L9W6 998 aa28.48■■■□□ 2.15
FOXP4-204ENST00000373063 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
FOXP4-204ENST00000373063 NRDCO43847 1150 aa28.44■■■□□ 2.14
FOXP4-204ENST00000373063 MSH5O43196 834 aa28.43■■■□□ 2.14
FOXP4-204ENST00000373063 GPATCH3Q96I76 525 aa28.43■■■□□ 2.14
FOXP4-204ENST00000373063 SLC4A10Q6U841 1118 aa28.42■■■□□ 2.14
FOXP4-204ENST00000373063 HDAC5Q9UQL6 1122 aa28.42■■■□□ 2.14
FOXP4-204ENST00000373063 LMOD3Q0VAK6 560 aa28.41■■■□□ 2.14
FOXP4-204ENST00000373063 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
FOXP4-204ENST00000373063 FAM69CQ0P6D2 419 aa28.4■■■□□ 2.14
FOXP4-204ENST00000373063 FRAT2O75474 233 aaPredicted RBP28.39■■■□□ 2.14
FOXP4-204ENST00000373063 SPRYD3Q8NCJ5 442 aa28.39■■■□□ 2.14
FOXP4-204ENST00000373063 CCER2I3L3R5 266 aa28.39■■■□□ 2.14
FOXP4-204ENST00000373063 SMC4Q9NTJ3 1288 aa28.39■■■□□ 2.13
FOXP4-204ENST00000373063 CCDC146Q8IYE0 955 aa28.37■■■□□ 2.13
FOXP4-204ENST00000373063 UACAQ9BZF9 1416 aa28.37■■■□□ 2.13
FOXP4-204ENST00000373063 RWDD1Q9H446 243 aaPredicted RBP28.36■■■□□ 2.13
FOXP4-204ENST00000373063 C1orf141Q5JVX7 400 aa28.36■■■□□ 2.13
FOXP4-204ENST00000373063 VGFO15240 615 aaPredicted RBP28.35■■■□□ 2.13
FOXP4-204ENST00000373063 CCDC144AA2RUR9 1427 aa28.34■■■□□ 2.13
FOXP4-204ENST00000373063 L3MBTL2Q969R5 705 aa28.33■■■□□ 2.13
FOXP4-204ENST00000373063 COG3Q96JB2 828 aa28.33■■■□□ 2.13
FOXP4-204ENST00000373063 HMMRO75330 724 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms