RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
GPC4-201ENST00000370828 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
GPC4-201ENST00000370828 MFAP1P55081 439 aaKnown RBP16.11■□□□□ 0.17
GPC4-201ENST00000370828 PLIN1O60240 522 aa16.11■□□□□ 0.17
GPC4-201ENST00000370828 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
GPC4-201ENST00000370828 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
GPC4-201ENST00000370828 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
GPC4-201ENST00000370828 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
GPC4-201ENST00000370828 FAM161AQ3B820 660 aa16.08■□□□□ 0.17
GPC4-201ENST00000370828 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.17
GPC4-201ENST00000370828 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
GPC4-201ENST00000370828 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
GPC4-201ENST00000370828 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
GPC4-201ENST00000370828 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
GPC4-201ENST00000370828 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
GPC4-201ENST00000370828 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
GPC4-201ENST00000370828 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
GPC4-201ENST00000370828 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
GPC4-201ENST00000370828 MS4A1P11836 297 aa16.04■□□□□ 0.16
GPC4-201ENST00000370828 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
GPC4-201ENST00000370828 HAP1P54257 671 aaPredicted RBP16.04■□□□□ 0.16
GPC4-201ENST00000370828 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
GPC4-201ENST00000370828 RALBP1Q15311 655 aa16.02■□□□□ 0.16
GPC4-201ENST00000370828 CRBNQ96SW2 442 aa16.02■□□□□ 0.16
GPC4-201ENST00000370828 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.15
GPC4-201ENST00000370828 RWDD1Q9H446 243 aaPredicted RBP16.02■□□□□ 0.15
GPC4-201ENST00000370828 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
GPC4-201ENST00000370828 NACADO15069 1562 aa16.01■□□□□ 0.15
GPC4-201ENST00000370828 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
GPC4-201ENST00000370828 PLEKHG5O94827 1062 aa16■□□□□ 0.15
GPC4-201ENST00000370828 PDE3BQ13370 1112 aa16■□□□□ 0.15
GPC4-201ENST00000370828 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
GPC4-201ENST00000370828 ABCC8Q09428 1581 aa16■□□□□ 0.15
GPC4-201ENST00000370828 TMF1P82094 1093 aa15.99■□□□□ 0.15
GPC4-201ENST00000370828 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
GPC4-201ENST00000370828 DDX11L8A8MPP1 907 aa15.99■□□□□ 0.15
GPC4-201ENST00000370828 GOLGA6L4A6NEF3 574 aa15.98■□□□□ 0.15
GPC4-201ENST00000370828 CLUAP1Q96AJ1 413 aa15.98■□□□□ 0.15
GPC4-201ENST00000370828 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
GPC4-201ENST00000370828 FAM43AQ8N2R8 423 aa15.97■□□□□ 0.15
GPC4-201ENST00000370828 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
GPC4-201ENST00000370828 GOLGA6L6A8MZA4 724 aa15.97■□□□□ 0.15
GPC4-201ENST00000370828 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
GPC4-201ENST00000370828 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
GPC4-201ENST00000370828 HOMEZQ8IX15 550 aa15.96■□□□□ 0.15
GPC4-201ENST00000370828 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
GPC4-201ENST00000370828 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
GPC4-201ENST00000370828 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.14
GPC4-201ENST00000370828 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.14
GPC4-201ENST00000370828 NRDCO43847 1150 aa15.95■□□□□ 0.14
GPC4-201ENST00000370828 NLRP13Q86W25 1043 aa15.95■□□□□ 0.14
GPC4-201ENST00000370828 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
GPC4-201ENST00000370828 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
GPC4-201ENST00000370828 APBB1O00213 710 aa15.94■□□□□ 0.14
GPC4-201ENST00000370828 ITPRIPQ8IWB1 547 aa15.93■□□□□ 0.14
GPC4-201ENST00000370828 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
GPC4-201ENST00000370828 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
GPC4-201ENST00000370828 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
GPC4-201ENST00000370828 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
GPC4-201ENST00000370828 ARHGAP35Q9NRY4 1499 aa15.91■□□□□ 0.14
GPC4-201ENST00000370828 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
GPC4-201ENST00000370828 FOXD4L5Q5VV16 416 aaPredicted RBP15.9■□□□□ 0.14
GPC4-201ENST00000370828 FOXD4L4Q8WXT5 416 aaPredicted RBP15.9■□□□□ 0.14
GPC4-201ENST00000370828 PKD2Q13563 968 aa15.89■□□□□ 0.13
GPC4-201ENST00000370828 MCCP23508 829 aa15.88■□□□□ 0.13
GPC4-201ENST00000370828 KCNJ4P48050 445 aa15.88■□□□□ 0.13
GPC4-201ENST00000370828 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
GPC4-201ENST00000370828 MAP7D2Q96T17 732 aa15.87■□□□□ 0.13
GPC4-201ENST00000370828 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
GPC4-201ENST00000370828 SKOR2Q2VWA4 1001 aaPredicted RBP15.86■□□□□ 0.13
GPC4-201ENST00000370828 R3HCC1Q9Y3T6 440 aaKnown RBP15.86■□□□□ 0.13
GPC4-201ENST00000370828 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
GPC4-201ENST00000370828 RRP9O43818 475 aaKnown RBP15.86■□□□□ 0.13
GPC4-201ENST00000370828 CHMP5Q9NZZ3 219 aa15.86■□□□□ 0.13
GPC4-201ENST00000370828 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
GPC4-201ENST00000370828 ZMYND15Q9H091 742 aa15.86■□□□□ 0.13
GPC4-201ENST00000370828 MORC1Q86VD1 984 aa15.85■□□□□ 0.13
GPC4-201ENST00000370828 FGD1P98174 961 aa15.85■□□□□ 0.13
GPC4-201ENST00000370828 RBM10P98175 930 aaKnown RBP15.84■□□□□ 0.13
GPC4-201ENST00000370828 NOL8Q76FK4 1167 aaKnown RBP15.84■□□□□ 0.13
GPC4-201ENST00000370828 MRE11P49959 708 aa15.84■□□□□ 0.13
GPC4-201ENST00000370828 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
GPC4-201ENST00000370828 COG6Q9Y2V7 657 aa15.83■□□□□ 0.13
GPC4-201ENST00000370828 FMN1Q68DA7 1419 aa15.83■□□□□ 0.12
GPC4-201ENST00000370828 IPO8O15397 1037 aaKnown RBP15.83■□□□□ 0.12
GPC4-201ENST00000370828 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
GPC4-201ENST00000370828 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
GPC4-201ENST00000370828 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
GPC4-201ENST00000370828 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
GPC4-201ENST00000370828 BACH2Q9BYV9 841 aa15.82■□□□□ 0.12
GPC4-201ENST00000370828 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
GPC4-201ENST00000370828 SMC4Q9NTJ3 1288 aa15.81■□□□□ 0.12
GPC4-201ENST00000370828 KIF15Q9NS87 1388 aa15.81■□□□□ 0.12
GPC4-201ENST00000370828 FOXD4L6Q3SYB3 417 aaPredicted RBP15.8■□□□□ 0.12
GPC4-201ENST00000370828 FOXD4L3Q6VB84 417 aaPredicted RBP15.8■□□□□ 0.12
GPC4-201ENST00000370828 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
GPC4-201ENST00000370828 TPM2P07951 284 aa15.79■□□□□ 0.12
GPC4-201ENST00000370828 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
GPC4-201ENST00000370828 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
GPC4-201ENST00000370828 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms