RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
UFL1-201ENST00000369278 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
UFL1-201ENST00000369278 PRDM10Q9NQV6 1147 aa9.96□□□□□ -0.82
UFL1-201ENST00000369278 MPNDQ8N594 471 aa9.95□□□□□ -0.82
UFL1-201ENST00000369278 POGKQ9P215 609 aa9.95□□□□□ -0.82
UFL1-201ENST00000369278 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
UFL1-201ENST00000369278 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
UFL1-201ENST00000369278 FOXD4L4Q8WXT5 416 aaPredicted RBP9.95□□□□□ -0.82
UFL1-201ENST00000369278 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
UFL1-201ENST00000369278 CRBNQ96SW2 442 aa9.94□□□□□ -0.82
UFL1-201ENST00000369278 BICRAQ9NZM4 1560 aa9.94□□□□□ -0.82
UFL1-201ENST00000369278 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
UFL1-201ENST00000369278 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
UFL1-201ENST00000369278 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
UFL1-201ENST00000369278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
UFL1-201ENST00000369278 AEBP2Q6ZN18 517 aaPredicted RBP9.93□□□□□ -0.82
UFL1-201ENST00000369278 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
UFL1-201ENST00000369278 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
UFL1-201ENST00000369278 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
UFL1-201ENST00000369278 GOLGA6L22H0YM25 854 aa9.92□□□□□ -0.82
UFL1-201ENST00000369278 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
UFL1-201ENST00000369278 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
UFL1-201ENST00000369278 KIF21BO75037 1637 aa9.9□□□□□ -0.82
UFL1-201ENST00000369278 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
UFL1-201ENST00000369278 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
UFL1-201ENST00000369278 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
UFL1-201ENST00000369278 RRP1P56182 461 aaKnown RBP9.88□□□□□ -0.83
UFL1-201ENST00000369278 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
UFL1-201ENST00000369278 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
UFL1-201ENST00000369278 HSCBQ8IWL3 235 aa9.88□□□□□ -0.83
UFL1-201ENST00000369278 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
UFL1-201ENST00000369278 BAZ1AQ9NRL2 1556 aaPredicted RBP9.87□□□□□ -0.83
UFL1-201ENST00000369278 APBB1O00213 710 aa9.87□□□□□ -0.83
UFL1-201ENST00000369278 CUX2O14529 1486 aa9.87□□□□□ -0.83
UFL1-201ENST00000369278 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
UFL1-201ENST00000369278 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
UFL1-201ENST00000369278 L3MBTL2Q969R5 705 aa9.85□□□□□ -0.83
UFL1-201ENST00000369278 ZBED9Q6R2W3 1325 aa9.85□□□□□ -0.83
UFL1-201ENST00000369278 NOL8Q76FK4 1167 aaKnown RBP9.85□□□□□ -0.83
UFL1-201ENST00000369278 FTSJ3Q8IY81 847 aaKnown RBP9.84□□□□□ -0.83
UFL1-201ENST00000369278 DCAF11Q8TEB1 546 aa9.84□□□□□ -0.83
UFL1-201ENST00000369278 MTUS2Q5JR59 1369 aa9.84□□□□□ -0.83
UFL1-201ENST00000369278 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
UFL1-201ENST00000369278 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
UFL1-201ENST00000369278 RRBP1Q9P2E9 1410 aaKnown RBP9.84□□□□□ -0.83
UFL1-201ENST00000369278 PANK2Q9BZ23 570 aa9.83□□□□□ -0.84
UFL1-201ENST00000369278 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
UFL1-201ENST00000369278 EEA1Q15075 1411 aa9.82□□□□□ -0.84
UFL1-201ENST00000369278 SETD5Q9C0A6 1442 aa9.82□□□□□ -0.84
UFL1-201ENST00000369278 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
UFL1-201ENST00000369278 KIAA1211Q6ZU35 1233 aa9.81□□□□□ -0.84
UFL1-201ENST00000369278 RNF214Q8ND24 703 aa9.8□□□□□ -0.84
UFL1-201ENST00000369278 COG6Q9Y2V7 657 aa9.8□□□□□ -0.84
UFL1-201ENST00000369278 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
UFL1-201ENST00000369278 FBLN2P98095 1184 aa9.8□□□□□ -0.84
UFL1-201ENST00000369278 TNNT3P45378 269 aaPredicted RBP9.79□□□□□ -0.84
UFL1-201ENST00000369278 ZNF771Q7L3S4 317 aaPredicted RBP9.79□□□□□ -0.84
UFL1-201ENST00000369278 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
UFL1-201ENST00000369278 RRAGDQ9NQL2 400 aaPredicted RBP9.79□□□□□ -0.84
UFL1-201ENST00000369278 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
UFL1-201ENST00000369278 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
UFL1-201ENST00000369278 IGSF3O75054 1194 aa9.78□□□□□ -0.84
UFL1-201ENST00000369278 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
UFL1-201ENST00000369278 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
UFL1-201ENST00000369278 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
UFL1-201ENST00000369278 RRP9O43818 475 aaKnown RBP9.77□□□□□ -0.85
UFL1-201ENST00000369278 TRAK2O60296 914 aa9.77□□□□□ -0.85
UFL1-201ENST00000369278 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
UFL1-201ENST00000369278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.77□□□□□ -0.85
UFL1-201ENST00000369278 PDE4CQ08493 712 aa9.77□□□□□ -0.85
UFL1-201ENST00000369278 ESPNB1AK53 854 aa9.77□□□□□ -0.85
UFL1-201ENST00000369278 GBP4Q96PP9 640 aa9.76□□□□□ -0.85
UFL1-201ENST00000369278 TRERF1Q96PN7 1200 aa9.76□□□□□ -0.85
UFL1-201ENST00000369278 DRC7Q8IY82 874 aa9.75□□□□□ -0.85
UFL1-201ENST00000369278 CALD1Q05682 793 aaKnown RBP9.75□□□□□ -0.85
UFL1-201ENST00000369278 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
UFL1-201ENST00000369278 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 CHAF1AQ13111 956 aaPredicted RBP9.74□□□□□ -0.85
UFL1-201ENST00000369278 AEBP1Q8IUX7 1158 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 E9PSI1 815 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 MS4A1P11836 297 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 KIAA2012Q0VF49 1180 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
UFL1-201ENST00000369278 CHMP4AQ9BY43 222 aa9.74□□□□□ -0.85
UFL1-201ENST00000369278 CBX1P83916 185 aa9.73□□□□□ -0.85
UFL1-201ENST00000369278 CENPQQ7L2Z9 268 aaPredicted RBP9.72□□□□□ -0.85
UFL1-201ENST00000369278 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
UFL1-201ENST00000369278 VGLL3A8MV65 326 aa9.71□□□□□ -0.85
UFL1-201ENST00000369278 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
UFL1-201ENST00000369278 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.86
UFL1-201ENST00000369278 ZNF592Q92610 1267 aa9.71□□□□□ -0.86
UFL1-201ENST00000369278 NASPP49321 788 aaPredicted RBP9.71□□□□□ -0.86
UFL1-201ENST00000369278 ST20-MTHFSA0A0A6YYL1 179 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 NPHP1O15259 732 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 CHMP3Q9Y3E7 222 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 U2SURPO15042 1029 aaKnown RBP9.7□□□□□ -0.86
UFL1-201ENST00000369278 MPHOSPH9Q99550 1183 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 TOP2AP11388 1531 aaKnown RBP9.7□□□□□ -0.86
UFL1-201ENST00000369278 UQCRHLA0A096LP55 91 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 UQCRHP07919 91 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms