RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 POGZQ7Z3K3 1410 aa7.73□□□□□ -1.17
CTSS-201ENST00000368985 PLXNC1O60486 1568 aa7.73□□□□□ -1.17
CTSS-201ENST00000368985 INO80Q9ULG1 1556 aaPredicted RBP7.73□□□□□ -1.17
CTSS-201ENST00000368985 MLH3Q9UHC1 1453 aa7.73□□□□□ -1.17
CTSS-201ENST00000368985 DENND4BO75064 1496 aaPredicted RBP7.72□□□□□ -1.17
CTSS-201ENST00000368985 PLEKHH2Q8IVE3 1493 aa7.71□□□□□ -1.17
CTSS-201ENST00000368985 TROQ12816 1431 aaPredicted RBP7.71□□□□□ -1.17
CTSS-201ENST00000368985 PCF11O94913 1555 aaKnown RBP7.71□□□□□ -1.17
CTSS-201ENST00000368985 IQSEC2Q5JU85 1478 aa7.71□□□□□ -1.18
CTSS-201ENST00000368985 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.18
CTSS-201ENST00000368985 DIP2CQ9Y2E4 1556 aa7.7□□□□□ -1.18
CTSS-201ENST00000368985 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
CTSS-201ENST00000368985 SIGLEC1Q9BZZ2 1709 aa7.7□□□□□ -1.18
CTSS-201ENST00000368985 ZNF518AQ6AHZ1 1483 aa7.7□□□□□ -1.18
CTSS-201ENST00000368985 AKNAQ7Z591 1439 aa7.7□□□□□ -1.18
CTSS-201ENST00000368985 MADDQ8WXG6 1647 aa7.7□□□□□ -1.18
CTSS-201ENST00000368985 ZC3H13Q5T200 1668 aaKnown RBP7.69□□□□□ -1.18
CTSS-201ENST00000368985 EHBP1L1Q8N3D4 1523 aa7.69□□□□□ -1.18
CTSS-201ENST00000368985 CLIP1P30622 1438 aa7.69□□□□□ -1.18
CTSS-201ENST00000368985 EIF2AK4Q9P2K8 1649 aaKnown RBP7.69□□□□□ -1.18
CTSS-201ENST00000368985 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
CTSS-201ENST00000368985 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
CTSS-201ENST00000368985 ARHGEF5Q12774 1597 aa7.69□□□□□ -1.18
CTSS-201ENST00000368985 KIAA1107Q9UPP5 1409 aa7.68□□□□□ -1.18
CTSS-201ENST00000368985 ABCA6Q8N139 1617 aa7.68□□□□□ -1.18
CTSS-201ENST00000368985 KIDINS220Q9ULH0 1771 aa7.68□□□□□ -1.18
CTSS-201ENST00000368985 KDM5AP29375 1690 aaKnown RBP7.67□□□□□ -1.18
CTSS-201ENST00000368985 RIMS1Q86UR5 1692 aaKnown RBP7.67□□□□□ -1.18
CTSS-201ENST00000368985 KDM4FA0A1W2PPD8 638 aa7.67□□□□□ -1.18
CTSS-201ENST00000368985 ATP10AO60312 1499 aa7.67□□□□□ -1.18
CTSS-201ENST00000368985 PTPRMP28827 1452 aa7.66□□□□□ -1.18
CTSS-201ENST00000368985 RNF17Q9BXT8 1623 aaKnown RBP7.65□□□□□ -1.18
CTSS-201ENST00000368985 CNTLNQ9NXG0 1405 aa7.65□□□□□ -1.18
CTSS-201ENST00000368985 SAMD9LQ8IVG5 1584 aa7.64□□□□□ -1.19
CTSS-201ENST00000368985 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
CTSS-201ENST00000368985 SUPT6HQ7KZ85 1726 aaKnown RBP7.64□□□□□ -1.19
CTSS-201ENST00000368985 CROCC2H7BZ55 1655 aa7.64□□□□□ -1.19
CTSS-201ENST00000368985 C3P01024 1663 aa7.64□□□□□ -1.19
CTSS-201ENST00000368985 NPATQ14207 1427 aa7.64□□□□□ -1.19
CTSS-201ENST00000368985 CDK13Q14004 1512 aaKnown RBP7.63□□□□□ -1.19
CTSS-201ENST00000368985 CEP162Q5TB80 1403 aa7.63□□□□□ -1.19
CTSS-201ENST00000368985 SETD1BQ9UPS6 1966 aaKnown RBP7.62□□□□□ -1.19
CTSS-201ENST00000368985 TIAM1Q13009 1591 aa7.62□□□□□ -1.19
CTSS-201ENST00000368985 KDM5DQ9BY66 1539 aa7.62□□□□□ -1.19
CTSS-201ENST00000368985 LMTK3Q96Q04 1460 aa7.62□□□□□ -1.19
CTSS-201ENST00000368985 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
CTSS-201ENST00000368985 CAMSAP2Q08AD1 1489 aa7.6□□□□□ -1.19
CTSS-201ENST00000368985 DEPDC5O75140 1603 aa7.59□□□□□ -1.19
CTSS-201ENST00000368985 PPP6R1Q9UPN7 881 aa7.59□□□□□ -1.19
CTSS-201ENST00000368985 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
CTSS-201ENST00000368985 ATP7AQ04656 1500 aa7.59□□□□□ -1.19
CTSS-201ENST00000368985 ARHGAP5Q13017 1502 aa7.59□□□□□ -1.19
CTSS-201ENST00000368985 PLA2R1Q13018 1463 aa7.59□□□□□ -1.2
CTSS-201ENST00000368985 STRCQ7RTU9 1775 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 SHANK2Q9UPX8 1470 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 PTPRTO14522 1441 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 POLR1AO95602 1720 aaPredicted RBP7.58□□□□□ -1.2
CTSS-201ENST00000368985 MYO3AQ8NEV4 1616 aa7.58□□□□□ -1.2
CTSS-201ENST00000368985 GPATCH8Q9UKJ3 1502 aaKnown RBP7.57□□□□□ -1.2
CTSS-201ENST00000368985 PPARGC1BQ86YN6 1023 aaKnown RBP7.55□□□□□ -1.2
CTSS-201ENST00000368985 SCAPERQ9BY12 1400 aa7.55□□□□□ -1.2
CTSS-201ENST00000368985 UBTFP17480 764 aaKnown RBP7.55□□□□□ -1.2
CTSS-201ENST00000368985 PTPN23Q9H3S7 1636 aa7.54□□□□□ -1.2
CTSS-201ENST00000368985 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
CTSS-201ENST00000368985 EFCAB2Q5VUJ9 269 aa7.54□□□□□ -1.2
CTSS-201ENST00000368985 MBD5Q9P267 1494 aa7.53□□□□□ -1.2
CTSS-201ENST00000368985 NCOA2Q15596 1464 aa7.53□□□□□ -1.2
CTSS-201ENST00000368985 TCOF1Q13428 1488 aaKnown RBP7.53□□□□□ -1.2
CTSS-201ENST00000368985 SYNMO15061 1565 aa7.53□□□□□ -1.2
CTSS-201ENST00000368985 LMTK2Q8IWU2 1503 aa7.53□□□□□ -1.2
CTSS-201ENST00000368985 SYCP2Q9BX26 1530 aa7.53□□□□□ -1.2
CTSS-201ENST00000368985 VWDEQ8N2E2 1590 aa7.52□□□□□ -1.21
CTSS-201ENST00000368985 YEATS2Q9ULM3 1422 aa7.52□□□□□ -1.21
CTSS-201ENST00000368985 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
CTSS-201ENST00000368985 PRDM15P57071 1507 aaPredicted RBP7.52□□□□□ -1.21
CTSS-201ENST00000368985 SPATA31D1Q6ZQQ2 1576 aa7.51□□□□□ -1.21
CTSS-201ENST00000368985 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
CTSS-201ENST00000368985 MROH1Q8NDA8 1641 aa7.51□□□□□ -1.21
CTSS-201ENST00000368985 CCDC141Q6ZP82 1450 aa7.51□□□□□ -1.21
CTSS-201ENST00000368985 DNMT1P26358 1616 aaKnown RBP7.5□□□□□ -1.21
CTSS-201ENST00000368985 CEP170BQ9Y4F5 1589 aaPredicted RBP7.49□□□□□ -1.21
CTSS-201ENST00000368985 TRAPPC8Q9Y2L5 1435 aa7.49□□□□□ -1.21
CTSS-201ENST00000368985 A2MP01023 1474 aa7.49□□□□□ -1.21
CTSS-201ENST00000368985 VPS8Q8N3P4 1428 aa7.49□□□□□ -1.21
CTSS-201ENST00000368985 LTBP4Q8N2S1 1624 aa7.49□□□□□ -1.21
CTSS-201ENST00000368985 CAMSAP1Q5T5Y3 1602 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 PZPP20742 1482 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 MED14O60244 1454 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 NCOA1Q15788 1441 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 ADGRL2O95490 1459 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 NLRP1Q9C000 1473 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 ARHGAP31Q2M1Z3 1444 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 DUOX2Q9NRD8 1548 aa7.48□□□□□ -1.21
CTSS-201ENST00000368985 GCC2Q8IWJ2 1684 aa7.47□□□□□ -1.21
CTSS-201ENST00000368985 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
CTSS-201ENST00000368985 A2ML1A8K2U0 1454 aa7.47□□□□□ -1.21
CTSS-201ENST00000368985 UHRF1BP1Q6BDS2 1440 aa7.46□□□□□ -1.21
CTSS-201ENST00000368985 ERBINQ96RT1 1412 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms