RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
CFHR3-201ENST00000367425 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
CFHR3-201ENST00000367425 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
CFHR3-201ENST00000367425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
CFHR3-201ENST00000367425 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
CFHR3-201ENST00000367425 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
CFHR3-201ENST00000367425 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
CFHR3-201ENST00000367425 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
CFHR3-201ENST00000367425 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
CFHR3-201ENST00000367425 PDAP1Q13442 181 aaKnown RBP10.85□□□□□ -0.67
CFHR3-201ENST00000367425 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
CFHR3-201ENST00000367425 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
CFHR3-201ENST00000367425 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
CFHR3-201ENST00000367425 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
CFHR3-201ENST00000367425 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
CFHR3-201ENST00000367425 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
CFHR3-201ENST00000367425 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
CFHR3-201ENST00000367425 PSEN1P49768 467 aa10.79□□□□□ -0.68
CFHR3-201ENST00000367425 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
CFHR3-201ENST00000367425 IFNL1Q8IU54 200 aa10.76□□□□□ -0.69
CFHR3-201ENST00000367425 Q6ZNB5 142 aa10.75□□□□□ -0.69
CFHR3-201ENST00000367425 HOXB3P14651 431 aaPredicted RBP10.73□□□□□ -0.69
CFHR3-201ENST00000367425 BCANQ96GW7 911 aa10.73□□□□□ -0.69
CFHR3-201ENST00000367425 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
CFHR3-201ENST00000367425 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
CFHR3-201ENST00000367425 LSM11P83369 360 aaKnown RBP eCLIP10.65□□□□□ -0.7
CFHR3-201ENST00000367425 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
CFHR3-201ENST00000367425 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
CFHR3-201ENST00000367425 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
CFHR3-201ENST00000367425 SOX12O15370 315 aa10.62□□□□□ -0.71
CFHR3-201ENST00000367425 NLRP6P59044 892 aa10.61□□□□□ -0.71
CFHR3-201ENST00000367425 G3V3G9 751 aa10.6□□□□□ -0.71
CFHR3-201ENST00000367425 PDCD7Q8N8D1 485 aaKnown RBP10.6□□□□□ -0.71
CFHR3-201ENST00000367425 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
CFHR3-201ENST00000367425 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
CFHR3-201ENST00000367425 LOC100996750A0A140TA64 210 aa10.55□□□□□ -0.72
CFHR3-201ENST00000367425 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
CFHR3-201ENST00000367425 KRTAP4-6Q9BYQ5 205 aa10.55□□□□□ -0.72
CFHR3-201ENST00000367425 FBXO22Q8NEZ5 403 aa10.55□□□□□ -0.72
CFHR3-201ENST00000367425 PBX2P40425 430 aa10.53□□□□□ -0.72
CFHR3-201ENST00000367425 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
CFHR3-201ENST00000367425 NBR1Q14596 966 aa10.52□□□□□ -0.73
CFHR3-201ENST00000367425 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
CFHR3-201ENST00000367425 PPP1R37O75864 691 aa10.49□□□□□ -0.73
CFHR3-201ENST00000367425 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
CFHR3-201ENST00000367425 A0A0G2JS52 829 aa10.47□□□□□ -0.73
CFHR3-201ENST00000367425 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
CFHR3-201ENST00000367425 MS4A4AQ96JQ5 239 aa10.44□□□□□ -0.74
CFHR3-201ENST00000367425 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
CFHR3-201ENST00000367425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
CFHR3-201ENST00000367425 PDE4AP27815 886 aa10.35□□□□□ -0.75
CFHR3-201ENST00000367425 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
CFHR3-201ENST00000367425 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
CFHR3-201ENST00000367425 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
CFHR3-201ENST00000367425 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
CFHR3-201ENST00000367425 ZNF316A6NFI3 1004 aaPredicted RBP10.33□□□□□ -0.76
CFHR3-201ENST00000367425 PRKCSHP14314 528 aaPredicted RBP10.33□□□□□ -0.76
CFHR3-201ENST00000367425 GPR153Q6NV75 609 aa10.33□□□□□ -0.76
CFHR3-201ENST00000367425 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
CFHR3-201ENST00000367425 E2F4Q16254 413 aa10.31□□□□□ -0.76
CFHR3-201ENST00000367425 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
CFHR3-201ENST00000367425 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
CFHR3-201ENST00000367425 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
CFHR3-201ENST00000367425 MFSD10Q14728 455 aa10.28□□□□□ -0.76
CFHR3-201ENST00000367425 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
CFHR3-201ENST00000367425 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
CFHR3-201ENST00000367425 DPY19L2Q6NUT2 758 aa10.26□□□□□ -0.77
CFHR3-201ENST00000367425 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
CFHR3-201ENST00000367425 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
CFHR3-201ENST00000367425 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
CFHR3-201ENST00000367425 ZNF775Q96BV0 537 aaPredicted RBP10.24□□□□□ -0.77
CFHR3-201ENST00000367425 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.78
CFHR3-201ENST00000367425 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.78
CFHR3-201ENST00000367425 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
CFHR3-201ENST00000367425 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
CFHR3-201ENST00000367425 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
CFHR3-201ENST00000367425 TK2O00142 265 aa10.18□□□□□ -0.78
CFHR3-201ENST00000367425 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
CFHR3-201ENST00000367425 ARIH1Q9Y4X5 557 aaPredicted RBP10.15□□□□□ -0.78
CFHR3-201ENST00000367425 DSG2Q14126 1118 aa10.13□□□□□ -0.79
CFHR3-201ENST00000367425 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
CFHR3-201ENST00000367425 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
CFHR3-201ENST00000367425 FOXK1P85037 733 aa10.12□□□□□ -0.79
CFHR3-201ENST00000367425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
CFHR3-201ENST00000367425 SEMA3EO15041 775 aa10.11□□□□□ -0.79
CFHR3-201ENST00000367425 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
CFHR3-201ENST00000367425 GFRA3O60609 400 aa10.11□□□□□ -0.79
CFHR3-201ENST00000367425 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
CFHR3-201ENST00000367425 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
CFHR3-201ENST00000367425 LCE2BO14633 110 aa10.1□□□□□ -0.79
CFHR3-201ENST00000367425 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
CFHR3-201ENST00000367425 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
CFHR3-201ENST00000367425 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
CFHR3-201ENST00000367425 KIF3CO14782 793 aa10.07□□□□□ -0.8
CFHR3-201ENST00000367425 PTPN5P54829 565 aa10.06□□□□□ -0.8
CFHR3-201ENST00000367425 HRO43593 1189 aa10.05□□□□□ -0.8
CFHR3-201ENST00000367425 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
CFHR3-201ENST00000367425 DPYSL4O14531 572 aa10.04□□□□□ -0.8
CFHR3-201ENST00000367425 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
CFHR3-201ENST00000367425 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms