RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 FAM212AQ96EL1 285 aa2.78□□□□□ -1.96
RNU6-54P-201ENST00000365563 KRTAP1-1Q07627 177 aa2.77□□□□□ -1.97
RNU6-54P-201ENST00000365563 ANKRD13DQ6ZTN6 518 aa2.77□□□□□ -1.97
RNU6-54P-201ENST00000365563 PDCD7Q8N8D1 485 aaKnown RBP2.77□□□□□ -1.97
RNU6-54P-201ENST00000365563 HOXB3P14651 431 aaPredicted RBP2.76□□□□□ -1.97
RNU6-54P-201ENST00000365563 TRAF7Q6Q0C0 670 aa2.76□□□□□ -1.97
RNU6-54P-201ENST00000365563 ZSWIM6Q9HCJ5 1215 aa2.76□□□□□ -1.97
RNU6-54P-201ENST00000365563 LSM11P83369 360 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-54P-201ENST00000365563 MIER1Q8N108 512 aa2.75□□□□□ -1.97
RNU6-54P-201ENST00000365563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-54P-201ENST00000365563 PBX2P40425 430 aa2.73□□□□□ -1.97
RNU6-54P-201ENST00000365563 PLCD3Q8N3E9 789 aa2.72□□□□□ -1.97
RNU6-54P-201ENST00000365563 BOLA1Q9Y3E2 137 aa2.72□□□□□ -1.97
RNU6-54P-201ENST00000365563 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
RNU6-54P-201ENST00000365563 LCE2BO14633 110 aa2.7□□□□□ -1.98
RNU6-54P-201ENST00000365563 NUBP1P53384 320 aa2.7□□□□□ -1.98
RNU6-54P-201ENST00000365563 IFFO2Q5TF58 517 aa2.7□□□□□ -1.98
RNU6-54P-201ENST00000365563 ZNF467Q7Z7K2 595 aaPredicted RBP2.7□□□□□ -1.98
RNU6-54P-201ENST00000365563 A0A0G2JS52 829 aa2.68□□□□□ -1.98
RNU6-54P-201ENST00000365563 ZNF316A6NFI3 1004 aaPredicted RBP2.68□□□□□ -1.98
RNU6-54P-201ENST00000365563 LAPTM4AQ15012 233 aa2.68□□□□□ -1.98
RNU6-54P-201ENST00000365563 PROM2Q8N271 834 aa2.68□□□□□ -1.98
RNU6-54P-201ENST00000365563 PCDHB8Q9UN66 801 aa2.68□□□□□ -1.98
RNU6-54P-201ENST00000365563 PYGBP11216 843 aa2.67□□□□□ -1.98
RNU6-54P-201ENST00000365563 GPR153Q6NV75 609 aa2.67□□□□□ -1.98
RNU6-54P-201ENST00000365563 ILDR1Q86SU0 546 aaPredicted RBP2.67□□□□□ -1.98
RNU6-54P-201ENST00000365563 STAC3Q96MF2 364 aa2.67□□□□□ -1.98
RNU6-54P-201ENST00000365563 LORP23490 312 aaPredicted RBP2.65□□□□□ -1.99
RNU6-54P-201ENST00000365563 INSM1Q01101 510 aaPredicted RBP2.65□□□□□ -1.99
RNU6-54P-201ENST00000365563 ADGRD1Q6QNK2 874 aa2.65□□□□□ -1.99
RNU6-54P-201ENST00000365563 LSRQ86X29 649 aaPredicted RBP2.65□□□□□ -1.99
RNU6-54P-201ENST00000365563 PSEN1P49768 467 aa2.64□□□□□ -1.99
RNU6-54P-201ENST00000365563 ARSIQ5FYB1 569 aa2.64□□□□□ -1.99
RNU6-54P-201ENST00000365563 DPY19L2Q6NUT2 758 aa2.64□□□□□ -1.99
RNU6-54P-201ENST00000365563 KCTD12Q96CX2 325 aaKnown RBP2.64□□□□□ -1.99
RNU6-54P-201ENST00000365563 TK2O00142 265 aa2.63□□□□□ -1.99
RNU6-54P-201ENST00000365563 COBLO75128 1261 aa2.63□□□□□ -1.99
RNU6-54P-201ENST00000365563 PSDA5PKW4 1024 aaPredicted RBP2.62□□□□□ -1.99
RNU6-54P-201ENST00000365563 PDAP1Q13442 181 aaKnown RBP2.62□□□□□ -1.99
RNU6-54P-201ENST00000365563 TREML4Q6UXN2 200 aa2.62□□□□□ -1.99
RNU6-54P-201ENST00000365563 ARHGAP33O14559 1287 aa2.61□□□□□ -1.99
RNU6-54P-201ENST00000365563 GSE1Q14687 1217 aa2.61□□□□□ -1.99
RNU6-54P-201ENST00000365563 KCNH8Q96L42 1107 aa2.61□□□□□ -1.99
RNU6-54P-201ENST00000365563 CABP2Q9NPB3 220 aa2.61□□□□□ -1.99
RNU6-54P-201ENST00000365563 AXIN2Q9Y2T1 843 aa2.61□□□□□ -1.99
RNU6-54P-201ENST00000365563 PTPN5P54829 565 aa2.6□□□□□ -1.99
RNU6-54P-201ENST00000365563 GOLGA2P5Q9HBQ8 144 aa2.6□□□□□ -1.99
RNU6-54P-201ENST00000365563 HRO43593 1189 aa2.59□□□□□ -1.99
RNU6-54P-201ENST00000365563 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
RNU6-54P-201ENST00000365563 MICALL2Q8IY33 904 aa2.59□□□□□ -1.99
RNU6-54P-201ENST00000365563 CHRM1P11229 460 aaPredicted RBP2.58□□□□□ -2
RNU6-54P-201ENST00000365563 LCE2AQ5TA79 106 aaPredicted RBP2.58□□□□□ -2
RNU6-54P-201ENST00000365563 GOLGA8CPA6NN73 597 aa2.57□□□□□ -2
RNU6-54P-201ENST00000365563 NRG2O14511 850 aaPredicted RBP2.57□□□□□ -2
RNU6-54P-201ENST00000365563 GFRA3O60609 400 aa2.57□□□□□ -2
RNU6-54P-201ENST00000365563 NUDT7P0C024 238 aa2.57□□□□□ -2
RNU6-54P-201ENST00000365563 POTEEQ6S8J3 1075 aa2.57□□□□□ -2
RNU6-54P-201ENST00000365563 KHSRPQ92945 711 aaKnown RBP eCLIP2.57□□□□□ -2
RNU6-54P-201ENST00000365563 LHX6Q9UPM6 363 aa2.57□□□□□ -2
RNU6-54P-201ENST00000365563 TMEM92Q6UXU6 159 aa2.56□□□□□ -2
RNU6-54P-201ENST00000365563 THSD4Q6ZMP0 1018 aa2.56□□□□□ -2
RNU6-54P-201ENST00000365563 ITGBL1O95965 494 aaPredicted RBP2.55□□□□□ -2
RNU6-54P-201ENST00000365563 PPP4R3BQ5MIZ7 849 aa2.54□□□□□ -2
RNU6-54P-201ENST00000365563 EHMT2Q96KQ7 1210 aa2.54□□□□□ -2
RNU6-54P-201ENST00000365563 FAM181BA6NEQ2 426 aa2.53□□□□□ -2
RNU6-54P-201ENST00000365563 DMRTA1Q5VZB9 504 aa2.53□□□□□ -2
RNU6-54P-201ENST00000365563 WNT2BQ93097 391 aa2.53□□□□□ -2
RNU6-54P-201ENST00000365563 PCDHGA4Q9Y5G9 962 aa2.53□□□□□ -2
RNU6-54P-201ENST00000365563 SLC34A2O95436 690 aa2.52□□□□□ -2.01
RNU6-54P-201ENST00000365563 PSEN2P49810 448 aa2.52□□□□□ -2.01
RNU6-54P-201ENST00000365563 NYAP1Q6ZVC0 841 aa2.52□□□□□ -2.01
RNU6-54P-201ENST00000365563 KCTD17Q8N5Z5 321 aa2.52□□□□□ -2.01
RNU6-54P-201ENST00000365563 SOX12O15370 315 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 KCNC4Q03721 635 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 MRPL50Q8N5N7 158 aaKnown RBP2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 EFCAB3Q8N7B9 438 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 KCNK17Q96T54 332 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 NBPF3Q9H094 633 aa2.51□□□□□ -2.01
RNU6-54P-201ENST00000365563 SLC4A5Q9BY07 1137 aa2.5□□□□□ -2.01
RNU6-54P-201ENST00000365563 VPS9D1Q9Y2B5 631 aa2.5□□□□□ -2.01
RNU6-54P-201ENST00000365563 KLHL34Q8N239 644 aa2.49□□□□□ -2.01
RNU6-54P-201ENST00000365563 ANKK1Q8NFD2 765 aa2.48□□□□□ -2.01
RNU6-54P-201ENST00000365563 TMC2Q8TDI7 906 aa2.47□□□□□ -2.01
RNU6-54P-201ENST00000365563 PRKD2Q9BZL6 878 aa2.47□□□□□ -2.01
RNU6-54P-201ENST00000365563 PDZRN3Q9UPQ7 1066 aa2.47□□□□□ -2.01
RNU6-54P-201ENST00000365563 V9GY48 417 aaPredicted RBP2.47□□□□□ -2.01
RNU6-54P-201ENST00000365563 C2orf72A6NCS6 295 aa2.46□□□□□ -2.02
RNU6-54P-201ENST00000365563 BHMG1C9JSJ3 638 aaPredicted RBP2.46□□□□□ -2.02
RNU6-54P-201ENST00000365563 KIF3CO14782 793 aa2.46□□□□□ -2.02
RNU6-54P-201ENST00000365563 CSRNP3Q8WYN3 585 aa2.46□□□□□ -2.02
RNU6-54P-201ENST00000365563 FBXO3Q9UK99 471 aa2.46□□□□□ -2.02
RNU6-54P-201ENST00000365563 TBC1D12O60347 775 aa2.45□□□□□ -2.02
RNU6-54P-201ENST00000365563 NLRP6P59044 892 aa2.45□□□□□ -2.02
RNU6-54P-201ENST00000365563 PKDCCQ504Y2 493 aa2.45□□□□□ -2.02
RNU6-54P-201ENST00000365563 MS4A4AQ96JQ5 239 aa2.45□□□□□ -2.02
RNU6-54P-201ENST00000365563 PTPREP23469 700 aa2.44□□□□□ -2.02
RNU6-54P-201ENST00000365563 TRIM41Q8WV44 630 aa2.44□□□□□ -2.02
RNU6-54P-201ENST00000365563 PHF8Q9UPP1 1060 aa2.44□□□□□ -2.02
RNU6-54P-201ENST00000365563 WIPF1O43516 503 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms