RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.44□□□□□ -1.06
RNU4-48P-201ENST00000365559 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
RNU4-48P-201ENST00000365559 NCKAP5LQ9HCH0 1330 aa8.42□□□□□ -1.06
RNU4-48P-201ENST00000365559 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
RNU4-48P-201ENST00000365559 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
RNU4-48P-201ENST00000365559 KIF3CO14782 793 aa8.39□□□□□ -1.07
RNU4-48P-201ENST00000365559 SLAIN1Q8ND83 568 aa8.39□□□□□ -1.07
RNU4-48P-201ENST00000365559 TMC2Q8TDI7 906 aa8.38□□□□□ -1.07
RNU4-48P-201ENST00000365559 GPHNQ9NQX3 736 aaPredicted RBP8.38□□□□□ -1.07
RNU4-48P-201ENST00000365559 PDE4AP27815 886 aa8.37□□□□□ -1.07
RNU4-48P-201ENST00000365559 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
RNU4-48P-201ENST00000365559 DSG2Q14126 1118 aa8.35□□□□□ -1.07
RNU4-48P-201ENST00000365559 KDM2AQ9Y2K7 1162 aa8.35□□□□□ -1.07
RNU4-48P-201ENST00000365559 SLC24A1O60721 1099 aa8.33□□□□□ -1.08
RNU4-48P-201ENST00000365559 MFSD10Q14728 455 aa8.33□□□□□ -1.08
RNU4-48P-201ENST00000365559 FOXK1P85037 733 aa8.32□□□□□ -1.08
RNU4-48P-201ENST00000365559 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
RNU4-48P-201ENST00000365559 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
RNU4-48P-201ENST00000365559 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
RNU4-48P-201ENST00000365559 VSIG10Q8N0Z9 540 aa8.31□□□□□ -1.08
RNU4-48P-201ENST00000365559 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
RNU4-48P-201ENST00000365559 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
RNU4-48P-201ENST00000365559 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
RNU4-48P-201ENST00000365559 E2F4Q16254 413 aa8.23□□□□□ -1.09
RNU4-48P-201ENST00000365559 EMILIN3Q9NT22 766 aa8.23□□□□□ -1.09
RNU4-48P-201ENST00000365559 SNPHO15079 494 aa8.22□□□□□ -1.09
RNU4-48P-201ENST00000365559 DOK7Q18PE1 504 aa8.22□□□□□ -1.09
RNU4-48P-201ENST00000365559 SLC34A2O95436 690 aa8.21□□□□□ -1.1
RNU4-48P-201ENST00000365559 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
RNU4-48P-201ENST00000365559 UPF1Q92900 1129 aaKnown RBP eCLIP8.21□□□□□ -1.1
RNU4-48P-201ENST00000365559 OXER1Q8TDS5 423 aa8.2□□□□□ -1.1
RNU4-48P-201ENST00000365559 PTCD2Q8WV60 388 aaKnown RBP8.19□□□□□ -1.1
RNU4-48P-201ENST00000365559 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
RNU4-48P-201ENST00000365559 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
RNU4-48P-201ENST00000365559 RIMBP2O15034 1052 aa8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 ST18O60284 1047 aa8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 ARSIQ5FYB1 569 aa8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
RNU4-48P-201ENST00000365559 DPYSL4O14531 572 aa8.16□□□□□ -1.1
RNU4-48P-201ENST00000365559 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
RNU4-48P-201ENST00000365559 P3H3Q8IVL6 736 aa8.15□□□□□ -1.1
RNU4-48P-201ENST00000365559 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
RNU4-48P-201ENST00000365559 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
RNU4-48P-201ENST00000365559 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
RNU4-48P-201ENST00000365559 TBC1D12O60347 775 aa8.13□□□□□ -1.11
RNU4-48P-201ENST00000365559 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
RNU4-48P-201ENST00000365559 KDM4FA0A1W2PPD8 638 aa8.12□□□□□ -1.11
RNU4-48P-201ENST00000365559 NUDT7P0C024 238 aa8.12□□□□□ -1.11
RNU4-48P-201ENST00000365559 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
RNU4-48P-201ENST00000365559 EVI5O60447 810 aa8.11□□□□□ -1.11
RNU4-48P-201ENST00000365559 MARVELD3Q96A59 401 aa8.1□□□□□ -1.11
RNU4-48P-201ENST00000365559 PDIA6Q15084 440 aa8.09□□□□□ -1.11
RNU4-48P-201ENST00000365559 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
RNU4-48P-201ENST00000365559 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
RNU4-48P-201ENST00000365559 LHX6Q9UPM6 363 aa8.07□□□□□ -1.12
RNU4-48P-201ENST00000365559 EMP3P54852 163 aa8.06□□□□□ -1.12
RNU4-48P-201ENST00000365559 SEMA3EO15041 775 aa8.05□□□□□ -1.12
RNU4-48P-201ENST00000365559 ZNF316A6NFI3 1004 aaPredicted RBP8.04□□□□□ -1.12
RNU4-48P-201ENST00000365559 DDX12PQ92771 950 aa8.03□□□□□ -1.12
RNU4-48P-201ENST00000365559 ERBB3P21860 1342 aa8.03□□□□□ -1.12
RNU4-48P-201ENST00000365559 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
RNU4-48P-201ENST00000365559 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
RNU4-48P-201ENST00000365559 PTGER2P43116 358 aa8.02□□□□□ -1.13
RNU4-48P-201ENST00000365559 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
RNU4-48P-201ENST00000365559 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
RNU4-48P-201ENST00000365559 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
RNU4-48P-201ENST00000365559 FOSBP53539 338 aa8□□□□□ -1.13
RNU4-48P-201ENST00000365559 ZNF454Q8N9F8 522 aa8□□□□□ -1.13
RNU4-48P-201ENST00000365559 JPH4Q96JJ6 628 aa8□□□□□ -1.13
RNU4-48P-201ENST00000365559 PCDHGA10Q9Y5H3 936 aa8□□□□□ -1.13
RNU4-48P-201ENST00000365559 TESPA1A2RU30 521 aaPredicted RBP7.99□□□□□ -1.13
RNU4-48P-201ENST00000365559 GRXCR2A6NFK2 248 aa7.99□□□□□ -1.13
RNU4-48P-201ENST00000365559 NBR1Q14596 966 aa7.99□□□□□ -1.13
RNU4-48P-201ENST00000365559 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
RNU4-48P-201ENST00000365559 POTEGQ6S5H5 508 aa7.98□□□□□ -1.13
RNU4-48P-201ENST00000365559 POTEMA6NI47 508 aa7.97□□□□□ -1.13
RNU4-48P-201ENST00000365559 PHF14O94880 888 aa7.97□□□□□ -1.13
RNU4-48P-201ENST00000365559 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
RNU4-48P-201ENST00000365559 PSDA5PKW4 1024 aaPredicted RBP7.96□□□□□ -1.14
RNU4-48P-201ENST00000365559 OSBPP22059 807 aa7.96□□□□□ -1.14
RNU4-48P-201ENST00000365559 PPP4R3BQ5MIZ7 849 aa7.96□□□□□ -1.14
RNU4-48P-201ENST00000365559 TYW1BQ6NUM6 668 aa7.95□□□□□ -1.14
RNU4-48P-201ENST00000365559 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
RNU4-48P-201ENST00000365559 EPAS1Q99814 870 aa7.95□□□□□ -1.14
RNU4-48P-201ENST00000365559 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
RNU4-48P-201ENST00000365559 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
RNU4-48P-201ENST00000365559 BCANQ96GW7 911 aa7.94□□□□□ -1.14
RNU4-48P-201ENST00000365559 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
RNU4-48P-201ENST00000365559 EN1Q05925 392 aaPredicted RBP7.92□□□□□ -1.14
RNU4-48P-201ENST00000365559 POTEEQ6S8J3 1075 aa7.92□□□□□ -1.14
RNU4-48P-201ENST00000365559 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
RNU4-48P-201ENST00000365559 RBM26Q5T8P6 1007 aaKnown RBP7.91□□□□□ -1.14
RNU4-48P-201ENST00000365559 BCL2L12Q9HB09 334 aa7.91□□□□□ -1.14
RNU4-48P-201ENST00000365559 MAP3K7O43318 606 aa7.9□□□□□ -1.14
RNU4-48P-201ENST00000365559 TSR1Q2NL82 804 aaKnown RBP7.9□□□□□ -1.14
RNU4-48P-201ENST00000365559 SMYD5Q6GMV2 418 aa7.9□□□□□ -1.14
RNU4-48P-201ENST00000365559 AXIN2Q9Y2T1 843 aa7.9□□□□□ -1.14
RNU4-48P-201ENST00000365559 PSEN2P49810 448 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms