RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
RNU6-560P-201ENST00000364007 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
RNU6-560P-201ENST00000364007 G3V3G9 751 aa10.23□□□□□ -0.77
RNU6-560P-201ENST00000364007 MFSD10Q14728 455 aa10.23□□□□□ -0.77
RNU6-560P-201ENST00000364007 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
RNU6-560P-201ENST00000364007 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
RNU6-560P-201ENST00000364007 E2F4Q16254 413 aa10.21□□□□□ -0.77
RNU6-560P-201ENST00000364007 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
RNU6-560P-201ENST00000364007 DSG2Q14126 1118 aa10.18□□□□□ -0.78
RNU6-560P-201ENST00000364007 NBR1Q14596 966 aa10.18□□□□□ -0.78
RNU6-560P-201ENST00000364007 P3H3Q8IVL6 736 aa10.18□□□□□ -0.78
RNU6-560P-201ENST00000364007 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
RNU6-560P-201ENST00000364007 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
RNU6-560P-201ENST00000364007 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
RNU6-560P-201ENST00000364007 KIF3CO14782 793 aa10.16□□□□□ -0.78
RNU6-560P-201ENST00000364007 FOXK1P85037 733 aa10.14□□□□□ -0.79
RNU6-560P-201ENST00000364007 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
RNU6-560P-201ENST00000364007 CAMK2BQ13554 666 aa10.13□□□□□ -0.79
RNU6-560P-201ENST00000364007 PLPP6Q8IY26 295 aa10.12□□□□□ -0.79
RNU6-560P-201ENST00000364007 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
RNU6-560P-201ENST00000364007 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
RNU6-560P-201ENST00000364007 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
RNU6-560P-201ENST00000364007 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
RNU6-560P-201ENST00000364007 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
RNU6-560P-201ENST00000364007 PRKCSHP14314 528 aaPredicted RBP10.05□□□□□ -0.8
RNU6-560P-201ENST00000364007 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
RNU6-560P-201ENST00000364007 SEMA3EO15041 775 aa10.04□□□□□ -0.8
RNU6-560P-201ENST00000364007 DPYSL4O14531 572 aa10.03□□□□□ -0.8
RNU6-560P-201ENST00000364007 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNU6-560P-201ENST00000364007 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
RNU6-560P-201ENST00000364007 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
RNU6-560P-201ENST00000364007 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
RNU6-560P-201ENST00000364007 OXER1Q8TDS5 423 aa9.97□□□□□ -0.81
RNU6-560P-201ENST00000364007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
RNU6-560P-201ENST00000364007 MLLT3P42568 568 aaPredicted RBP9.95□□□□□ -0.82
RNU6-560P-201ENST00000364007 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
RNU6-560P-201ENST00000364007 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
RNU6-560P-201ENST00000364007 PDIA6Q15084 440 aa9.93□□□□□ -0.82
RNU6-560P-201ENST00000364007 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
RNU6-560P-201ENST00000364007 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
RNU6-560P-201ENST00000364007 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
RNU6-560P-201ENST00000364007 PTCD2Q8WV60 388 aaKnown RBP9.91□□□□□ -0.82
RNU6-560P-201ENST00000364007 SLC34A2O95436 690 aa9.9□□□□□ -0.82
RNU6-560P-201ENST00000364007 TBC1D12O60347 775 aa9.89□□□□□ -0.83
RNU6-560P-201ENST00000364007 EVI5O60447 810 aa9.88□□□□□ -0.83
RNU6-560P-201ENST00000364007 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
RNU6-560P-201ENST00000364007 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
RNU6-560P-201ENST00000364007 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
RNU6-560P-201ENST00000364007 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
RNU6-560P-201ENST00000364007 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
RNU6-560P-201ENST00000364007 LHX8Q68G74 356 aa9.86□□□□□ -0.83
RNU6-560P-201ENST00000364007 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
RNU6-560P-201ENST00000364007 PCDHGA4Q9Y5G9 962 aa9.86□□□□□ -0.83
RNU6-560P-201ENST00000364007 DDX12PQ92771 950 aa9.84□□□□□ -0.83
RNU6-560P-201ENST00000364007 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNU6-560P-201ENST00000364007 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
RNU6-560P-201ENST00000364007 PTGER2P43116 358 aa9.82□□□□□ -0.84
RNU6-560P-201ENST00000364007 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
RNU6-560P-201ENST00000364007 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
RNU6-560P-201ENST00000364007 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
RNU6-560P-201ENST00000364007 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
RNU6-560P-201ENST00000364007 OSBPP22059 807 aa9.79□□□□□ -0.84
RNU6-560P-201ENST00000364007 GPR153Q6NV75 609 aa9.79□□□□□ -0.84
RNU6-560P-201ENST00000364007 NUDT7P0C024 238 aa9.78□□□□□ -0.84
RNU6-560P-201ENST00000364007 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
RNU6-560P-201ENST00000364007 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
RNU6-560P-201ENST00000364007 RIMBP2O15034 1052 aa9.76□□□□□ -0.85
RNU6-560P-201ENST00000364007 ZNF316A6NFI3 1004 aaPredicted RBP9.75□□□□□ -0.85
RNU6-560P-201ENST00000364007 GPIHBP1Q8IV16 184 aa9.74□□□□□ -0.85
RNU6-560P-201ENST00000364007 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
RNU6-560P-201ENST00000364007 PCDHGA10Q9Y5H3 936 aa9.74□□□□□ -0.85
RNU6-560P-201ENST00000364007 NUTM2FA1L443 756 aa9.73□□□□□ -0.85
RNU6-560P-201ENST00000364007 SNPHO15079 494 aa9.73□□□□□ -0.85
RNU6-560P-201ENST00000364007 PHF14O94880 888 aa9.72□□□□□ -0.85
RNU6-560P-201ENST00000364007 ZMYND10O75800 440 aa9.71□□□□□ -0.86
RNU6-560P-201ENST00000364007 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
RNU6-560P-201ENST00000364007 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
RNU6-560P-201ENST00000364007 GPR37O15354 613 aa9.69□□□□□ -0.86
RNU6-560P-201ENST00000364007 FOSBP53539 338 aa9.69□□□□□ -0.86
RNU6-560P-201ENST00000364007 EPAS1Q99814 870 aa9.69□□□□□ -0.86
RNU6-560P-201ENST00000364007 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
RNU6-560P-201ENST00000364007 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
RNU6-560P-201ENST00000364007 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
RNU6-560P-201ENST00000364007 SLC24A3Q9HC58 644 aa9.68□□□□□ -0.86
RNU6-560P-201ENST00000364007 EN1Q05925 392 aaPredicted RBP9.67□□□□□ -0.86
RNU6-560P-201ENST00000364007 TYW1BQ6NUM6 668 aa9.67□□□□□ -0.86
RNU6-560P-201ENST00000364007 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
RNU6-560P-201ENST00000364007 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
RNU6-560P-201ENST00000364007 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
RNU6-560P-201ENST00000364007 MAP3K7O43318 606 aa9.65□□□□□ -0.86
RNU6-560P-201ENST00000364007 FECHP22830 423 aa9.64□□□□□ -0.87
RNU6-560P-201ENST00000364007 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
RNU6-560P-201ENST00000364007 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
RNU6-560P-201ENST00000364007 ST18O60284 1047 aa9.62□□□□□ -0.87
RNU6-560P-201ENST00000364007 PTGDRQ13258 359 aa9.62□□□□□ -0.87
RNU6-560P-201ENST00000364007 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
RNU6-560P-201ENST00000364007 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
RNU6-560P-201ENST00000364007 NPDC1Q9NQX5 325 aaPredicted RBP9.62□□□□□ -0.87
RNU6-560P-201ENST00000364007 FCHSD2O94868 740 aa9.61□□□□□ -0.87
RNU6-560P-201ENST00000364007 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms