RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
RNU1-87P-201ENST00000363727 E2F4Q16254 413 aa10.41□□□□□ -0.74
RNU1-87P-201ENST00000363727 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
RNU1-87P-201ENST00000363727 METRNQ9UJH8 293 aa10.4□□□□□ -0.74
RNU1-87P-201ENST00000363727 C7P10643 843 aa10.38□□□□□ -0.75
RNU1-87P-201ENST00000363727 MFSD10Q14728 455 aa10.38□□□□□ -0.75
RNU1-87P-201ENST00000363727 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
RNU1-87P-201ENST00000363727 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
RNU1-87P-201ENST00000363727 L3MBTL3Q96JM7 780 aaPredicted RBP10.37□□□□□ -0.75
RNU1-87P-201ENST00000363727 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
RNU1-87P-201ENST00000363727 TMEM121BQ9BXQ6 578 aaPredicted RBP10.36□□□□□ -0.75
RNU1-87P-201ENST00000363727 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
RNU1-87P-201ENST00000363727 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
RNU1-87P-201ENST00000363727 DSG2Q14126 1118 aa10.33□□□□□ -0.76
RNU1-87P-201ENST00000363727 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
RNU1-87P-201ENST00000363727 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
RNU1-87P-201ENST00000363727 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
RNU1-87P-201ENST00000363727 CAMK2BQ13554 666 aa10.28□□□□□ -0.76
RNU1-87P-201ENST00000363727 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
RNU1-87P-201ENST00000363727 FOXK1P85037 733 aa10.27□□□□□ -0.77
RNU1-87P-201ENST00000363727 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
RNU1-87P-201ENST00000363727 KIF3CO14782 793 aa10.26□□□□□ -0.77
RNU1-87P-201ENST00000363727 SEMA3EO15041 775 aa10.26□□□□□ -0.77
RNU1-87P-201ENST00000363727 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
RNU1-87P-201ENST00000363727 DPYSL4O14531 572 aa10.23□□□□□ -0.77
RNU1-87P-201ENST00000363727 UPF1Q92900 1129 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNU1-87P-201ENST00000363727 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
RNU1-87P-201ENST00000363727 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
RNU1-87P-201ENST00000363727 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
RNU1-87P-201ENST00000363727 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
RNU1-87P-201ENST00000363727 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
RNU1-87P-201ENST00000363727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
RNU1-87P-201ENST00000363727 MLLT3P42568 568 aaPredicted RBP10.15□□□□□ -0.78
RNU1-87P-201ENST00000363727 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
RNU1-87P-201ENST00000363727 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
RNU1-87P-201ENST00000363727 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
RNU1-87P-201ENST00000363727 PDIA6Q15084 440 aa10.11□□□□□ -0.79
RNU1-87P-201ENST00000363727 SMYD5Q6GMV2 418 aa10.11□□□□□ -0.79
RNU1-87P-201ENST00000363727 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
RNU1-87P-201ENST00000363727 OXER1Q8TDS5 423 aa10.1□□□□□ -0.79
RNU1-87P-201ENST00000363727 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
RNU1-87P-201ENST00000363727 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
RNU1-87P-201ENST00000363727 TBC1D12O60347 775 aa10.05□□□□□ -0.8
RNU1-87P-201ENST00000363727 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
RNU1-87P-201ENST00000363727 EVI5O60447 810 aa10.04□□□□□ -0.8
RNU1-87P-201ENST00000363727 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
RNU1-87P-201ENST00000363727 DDX12PQ92771 950 aa10.04□□□□□ -0.8
RNU1-87P-201ENST00000363727 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
RNU1-87P-201ENST00000363727 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
RNU1-87P-201ENST00000363727 SLC34A2O95436 690 aa10.01□□□□□ -0.81
RNU1-87P-201ENST00000363727 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
RNU1-87P-201ENST00000363727 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
RNU1-87P-201ENST00000363727 PCDHGA4Q9Y5G9 962 aa10□□□□□ -0.81
RNU1-87P-201ENST00000363727 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
RNU1-87P-201ENST00000363727 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
RNU1-87P-201ENST00000363727 OSBPP22059 807 aa9.95□□□□□ -0.82
RNU1-87P-201ENST00000363727 KHSRPQ92945 711 aaKnown RBP eCLIP9.95□□□□□ -0.82
RNU1-87P-201ENST00000363727 HOXB3P14651 431 aaPredicted RBP9.94□□□□□ -0.82
RNU1-87P-201ENST00000363727 PTGER2P43116 358 aa9.94□□□□□ -0.82
RNU1-87P-201ENST00000363727 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
RNU1-87P-201ENST00000363727 ARSIQ5FYB1 569 aa9.94□□□□□ -0.82
RNU1-87P-201ENST00000363727 SLC24A3Q9HC58 644 aa9.93□□□□□ -0.82
RNU1-87P-201ENST00000363727 ZMYND10O75800 440 aa9.92□□□□□ -0.82
RNU1-87P-201ENST00000363727 NUDT7P0C024 238 aa9.92□□□□□ -0.82
RNU1-87P-201ENST00000363727 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
RNU1-87P-201ENST00000363727 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
RNU1-87P-201ENST00000363727 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
RNU1-87P-201ENST00000363727 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
RNU1-87P-201ENST00000363727 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
RNU1-87P-201ENST00000363727 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
RNU1-87P-201ENST00000363727 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
RNU1-87P-201ENST00000363727 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
RNU1-87P-201ENST00000363727 PHF14O94880 888 aa9.87□□□□□ -0.83
RNU1-87P-201ENST00000363727 LHX8Q68G74 356 aa9.87□□□□□ -0.83
RNU1-87P-201ENST00000363727 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
RNU1-87P-201ENST00000363727 KDM4FA0A1W2PPD8 638 aa9.86□□□□□ -0.83
RNU1-87P-201ENST00000363727 GPR37O15354 613 aa9.86□□□□□ -0.83
RNU1-87P-201ENST00000363727 MAP3K7O43318 606 aa9.86□□□□□ -0.83
RNU1-87P-201ENST00000363727 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
RNU1-87P-201ENST00000363727 ZNF454Q8N9F8 522 aa9.85□□□□□ -0.83
RNU1-87P-201ENST00000363727 EPAS1Q99814 870 aa9.85□□□□□ -0.83
RNU1-87P-201ENST00000363727 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
RNU1-87P-201ENST00000363727 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
RNU1-87P-201ENST00000363727 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
RNU1-87P-201ENST00000363727 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
RNU1-87P-201ENST00000363727 SNPHO15079 494 aa9.83□□□□□ -0.84
RNU1-87P-201ENST00000363727 FCHSD2O94868 740 aa9.83□□□□□ -0.84
RNU1-87P-201ENST00000363727 TSR1Q2NL82 804 aaKnown RBP9.83□□□□□ -0.84
RNU1-87P-201ENST00000363727 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
RNU1-87P-201ENST00000363727 FOSBP53539 338 aa9.82□□□□□ -0.84
RNU1-87P-201ENST00000363727 LHX6Q9UPM6 363 aa9.82□□□□□ -0.84
RNU1-87P-201ENST00000363727 GNPATO15228 680 aa9.8□□□□□ -0.84
RNU1-87P-201ENST00000363727 FECHP22830 423 aa9.8□□□□□ -0.84
RNU1-87P-201ENST00000363727 PTGDRQ13258 359 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 HIC1Q14526 733 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 AK7Q96M32 723 aa9.79□□□□□ -0.84
RNU1-87P-201ENST00000363727 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms