RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 TIAM1Q13009 1591 aa5.59□□□□□ -1.51
RNU4-35P-201ENST00000362588 SAMD9LQ8IVG5 1584 aa5.59□□□□□ -1.51
RNU4-35P-201ENST00000362588 EHBP1L1Q8N3D4 1523 aa5.59□□□□□ -1.51
RNU4-35P-201ENST00000362588 DENND4BO75064 1496 aaPredicted RBP5.59□□□□□ -1.51
RNU4-35P-201ENST00000362588 AEBP2Q6ZN18 517 aaPredicted RBP5.59□□□□□ -1.51
RNU4-35P-201ENST00000362588 ABCC1P33527 1531 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 ZMYM4Q5VZL5 1548 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 POGZQ7Z3K3 1410 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 VPS8Q8N3P4 1428 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 SCAPERQ9BY12 1400 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 YEATS2Q9ULM3 1422 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 BCORL1Q5H9F3 1711 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 SUPT6HQ7KZ85 1726 aaKnown RBP5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 CDK11AQ9UQ88 783 aaPredicted RBP5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 ZFYVE16Q7Z3T8 1539 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 SYCP2Q9BX26 1530 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 ARHGEF12Q9NZN5 1544 aa5.58□□□□□ -1.52
RNU4-35P-201ENST00000362588 MTUS2Q5JR59 1369 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 RIMS1Q86UR5 1692 aaKnown RBP5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 ABCA6Q8N139 1617 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 MADDQ8WXG6 1647 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 KDM5CP41229 1560 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 HECW2Q9P2P5 1572 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 KIDINS220Q9ULH0 1771 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 TRAPPC8Q9Y2L5 1435 aa5.57□□□□□ -1.52
RNU4-35P-201ENST00000362588 ADAMTSL3P82987 1691 aa5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 PHLDB1Q86UU1 1377 aa5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 DIP2CQ9Y2E4 1556 aa5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 EFCAB2Q5VUJ9 269 aa5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 ZNF777Q9ULD5 760 aaPredicted RBP5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 GPATCH8Q9UKJ3 1502 aaKnown RBP5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 FER1L4A9Z1Z3 1794 aa5.56□□□□□ -1.52
RNU4-35P-201ENST00000362588 NCOA2Q15596 1464 aa5.55□□□□□ -1.52
RNU4-35P-201ENST00000362588 ZNF518AQ6AHZ1 1483 aa5.55□□□□□ -1.52
RNU4-35P-201ENST00000362588 CCNB3Q8WWL7 1395 aa5.55□□□□□ -1.52
RNU4-35P-201ENST00000362588 LRRC9Q6ZRR7 1453 aa5.54□□□□□ -1.52
RNU4-35P-201ENST00000362588 AFAP1Q8N556 730 aa5.54□□□□□ -1.52
RNU4-35P-201ENST00000362588 ADGBQ8N7X0 1667 aa5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 ZNF644Q9H582 1327 aaPredicted RBP5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 CAMSAP2Q08AD1 1489 aa5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 MLECQ14165 292 aa5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 MYT1LQ9UL68 1186 aa5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 INO80Q9ULG1 1556 aaPredicted RBP5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 ATP7AQ04656 1500 aa5.53□□□□□ -1.52
RNU4-35P-201ENST00000362588 MAGI2Q86UL8 1455 aa5.52□□□□□ -1.53
RNU4-35P-201ENST00000362588 C9orf84Q5VXU9 1444 aa5.52□□□□□ -1.53
RNU4-35P-201ENST00000362588 HNRNPMP52272 730 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU4-35P-201ENST00000362588 PLPPR3Q6T4P5 718 aa5.52□□□□□ -1.53
RNU4-35P-201ENST00000362588 CFDP1Q9UEE9 299 aaPredicted RBP5.52□□□□□ -1.53
RNU4-35P-201ENST00000362588 ATP10AO60312 1499 aa5.51□□□□□ -1.53
RNU4-35P-201ENST00000362588 PTPRMP28827 1452 aa5.51□□□□□ -1.53
RNU4-35P-201ENST00000362588 MAP3K1Q13233 1512 aa5.51□□□□□ -1.53
RNU4-35P-201ENST00000362588 MLH3Q9UHC1 1453 aa5.51□□□□□ -1.53
RNU4-35P-201ENST00000362588 REREQ9P2R6 1566 aa5.5□□□□□ -1.53
RNU4-35P-201ENST00000362588 PLEKHH2Q8IVE3 1493 aa5.5□□□□□ -1.53
RNU4-35P-201ENST00000362588 MBD5Q9P267 1494 aa5.5□□□□□ -1.53
RNU4-35P-201ENST00000362588 CROCC2H7BZ55 1655 aa5.5□□□□□ -1.53
RNU4-35P-201ENST00000362588 C3P01024 1663 aa5.5□□□□□ -1.53
RNU4-35P-201ENST00000362588 PTPN23Q9H3S7 1636 aa5.49□□□□□ -1.53
RNU4-35P-201ENST00000362588 CCDC141Q6ZP82 1450 aa5.49□□□□□ -1.53
RNU4-35P-201ENST00000362588 PLXNC1O60486 1568 aa5.49□□□□□ -1.53
RNU4-35P-201ENST00000362588 ARHGEF5Q12774 1597 aa5.49□□□□□ -1.53
RNU4-35P-201ENST00000362588 CLTCQ00610 1675 aaKnown RBP5.49□□□□□ -1.53
RNU4-35P-201ENST00000362588 SPAG9O60271 1321 aaKnown RBP5.48□□□□□ -1.53
RNU4-35P-201ENST00000362588 MYOM3Q5VTT5 1437 aa5.48□□□□□ -1.53
RNU4-35P-201ENST00000362588 KIAA1107Q9UPP5 1409 aa5.48□□□□□ -1.53
RNU4-35P-201ENST00000362588 PPARGC1BQ86YN6 1023 aaKnown RBP5.48□□□□□ -1.53
RNU4-35P-201ENST00000362588 AGLP35573 1532 aa5.48□□□□□ -1.53
RNU4-35P-201ENST00000362588 A2MP01023 1474 aa5.47□□□□□ -1.53
RNU4-35P-201ENST00000362588 CFAP65Q6ZU64 1925 aaKnown RBP5.47□□□□□ -1.53
RNU4-35P-201ENST00000362588 APLP2Q06481 763 aa5.47□□□□□ -1.53
RNU4-35P-201ENST00000362588 PREX1Q8TCU6 1659 aa5.47□□□□□ -1.53
RNU4-35P-201ENST00000362588 CEP152O94986 1710 aa5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 DNMT1P26358 1616 aaKnown RBP5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 CEBPAP49715 358 aaPredicted RBP5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 FGD6Q6ZV73 1430 aa5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 MROH2AA6NES4 1674 aa5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 MAST1Q9Y2H9 1570 aa5.46□□□□□ -1.54
RNU4-35P-201ENST00000362588 LMTK3Q96Q04 1460 aa5.45□□□□□ -1.54
RNU4-35P-201ENST00000362588 MIA2Q96PC5 1412 aa5.45□□□□□ -1.54
RNU4-35P-201ENST00000362588 SETD1BQ9UPS6 1966 aaKnown RBP5.44□□□□□ -1.54
RNU4-35P-201ENST00000362588 RTEL1-TNFRSF6BF6WH68 1400 aa5.44□□□□□ -1.54
RNU4-35P-201ENST00000362588 HSPA2P54652 639 aa5.44□□□□□ -1.54
RNU4-35P-201ENST00000362588 MROH1Q8NDA8 1641 aa5.44□□□□□ -1.54
RNU4-35P-201ENST00000362588 TCOF1Q13428 1488 aaKnown RBP5.44□□□□□ -1.54
RNU4-35P-201ENST00000362588 ABCC5O15440 1437 aa5.43□□□□□ -1.54
RNU4-35P-201ENST00000362588 DAPK1P53355 1430 aa5.43□□□□□ -1.54
RNU4-35P-201ENST00000362588 GGT6Q6P531 493 aa5.43□□□□□ -1.54
RNU4-35P-201ENST00000362588 MYO3AQ8NEV4 1616 aa5.43□□□□□ -1.54
RNU4-35P-201ENST00000362588 RNF17Q9BXT8 1623 aaKnown RBP5.43□□□□□ -1.54
RNU4-35P-201ENST00000362588 DHX29Q7Z478 1369 aaKnown RBP5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 STRCQ7RTU9 1775 aa5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 EIF2AK4Q9P2K8 1649 aaKnown RBP5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 KIF3BO15066 747 aa5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 FAM50AQ14320 339 aaKnown RBP5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 CHIC2Q9UKJ5 165 aa5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 SHANK2Q9UPX8 1470 aa5.42□□□□□ -1.54
RNU4-35P-201ENST00000362588 CAMSAP1Q5T5Y3 1602 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms