RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 PLCH2O75038 1416 aa27.22■■□□□ 1.95
CCDC7-203ENST00000362006 ARAP3Q8WWN8 1544 aa27.21■■□□□ 1.95
CCDC7-203ENST00000362006 CAMSAP2Q08AD1 1489 aa27.19■■□□□ 1.94
CCDC7-203ENST00000362006 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
CCDC7-203ENST00000362006 ZNF777Q9ULD5 760 aaPredicted RBP27.16■■□□□ 1.94
CCDC7-203ENST00000362006 ITGAEP38570 1179 aa27.16■■□□□ 1.94
CCDC7-203ENST00000362006 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
CCDC7-203ENST00000362006 ZNF644Q9H582 1327 aaPredicted RBP27.14■■□□□ 1.94
CCDC7-203ENST00000362006 GLI2P10070 1586 aa27.13■■□□□ 1.93
CCDC7-203ENST00000362006 PLEKHH2Q8IVE3 1493 aa27.13■■□□□ 1.93
CCDC7-203ENST00000362006 DNMT1P26358 1616 aaKnown RBP27.11■■□□□ 1.93
CCDC7-203ENST00000362006 SAMD9LQ8IVG5 1584 aa27.1■■□□□ 1.93
CCDC7-203ENST00000362006 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
CCDC7-203ENST00000362006 RSPH4AQ5TD94 716 aa27.08■■□□□ 1.93
CCDC7-203ENST00000362006 DAPK1P53355 1430 aa27.07■■□□□ 1.92
CCDC7-203ENST00000362006 KIAA1107Q9UPP5 1409 aa27.07■■□□□ 1.92
CCDC7-203ENST00000362006 ARHGEF5Q12774 1597 aa27.06■■□□□ 1.92
CCDC7-203ENST00000362006 ABCC5O15440 1437 aa27.05■■□□□ 1.92
CCDC7-203ENST00000362006 DIP2BQ9P265 1576 aa27.05■■□□□ 1.92
CCDC7-203ENST00000362006 FANCAO15360 1455 aa27.04■■□□□ 1.92
CCDC7-203ENST00000362006 PTPRKQ15262 1439 aa27.04■■□□□ 1.92
CCDC7-203ENST00000362006 MAP3K4Q9Y6R4 1608 aa27.03■■□□□ 1.92
CCDC7-203ENST00000362006 CFAP74Q9C0B2 1584 aa27.03■■□□□ 1.92
CCDC7-203ENST00000362006 MBD5Q9P267 1494 aa27.01■■□□□ 1.91
CCDC7-203ENST00000362006 FAM69CQ0P6D2 419 aa27■■□□□ 1.91
CCDC7-203ENST00000362006 CROCC2H7BZ55 1655 aa26.99■■□□□ 1.91
CCDC7-203ENST00000362006 ABCC1P33527 1531 aa26.99■■□□□ 1.91
CCDC7-203ENST00000362006 HNRNPMP52272 730 aaKnown RBP eCLIP26.99■■□□□ 1.912e-6■■■■■ 31.6
CCDC7-203ENST00000362006 AKNAQ7Z591 1439 aa26.98■■□□□ 1.91
CCDC7-203ENST00000362006 CCDC141Q6ZP82 1450 aa26.98■■□□□ 1.91
CCDC7-203ENST00000362006 SHANK2Q9UPX8 1470 aa26.98■■□□□ 1.91
CCDC7-203ENST00000362006 SYCP2Q9BX26 1530 aa26.98■■□□□ 1.91
CCDC7-203ENST00000362006 ROCK1Q13464 1354 aa26.98■■□□□ 1.91
CCDC7-203ENST00000362006 TSPY4P0CV99 314 aa26.96■■□□□ 1.91
CCDC7-203ENST00000362006 TSPY10P0CW01 314 aa26.96■■□□□ 1.91
CCDC7-203ENST00000362006 SETD5Q9C0A6 1442 aa26.96■■□□□ 1.91
CCDC7-203ENST00000362006 HFM1A2PYH4 1435 aa26.95■■□□□ 1.9
CCDC7-203ENST00000362006 NEO1Q92859 1461 aa26.94■■□□□ 1.9
CCDC7-203ENST00000362006 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
CCDC7-203ENST00000362006 ADGBQ8N7X0 1667 aa26.93■■□□□ 1.9
CCDC7-203ENST00000362006 HRCP23327 699 aa26.92■■□□□ 1.9
CCDC7-203ENST00000362006 ADGRL1O94910 1474 aa26.92■■□□□ 1.9
CCDC7-203ENST00000362006 ARHGEF12Q9NZN5 1544 aa26.91■■□□□ 1.9
CCDC7-203ENST00000362006 ADGRL2O95490 1459 aa26.91■■□□□ 1.9
CCDC7-203ENST00000362006 KIF13AQ9H1H9 1805 aa26.91■■□□□ 1.9
CCDC7-203ENST00000362006 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
CCDC7-203ENST00000362006 MAST1Q9Y2H9 1570 aa26.89■■□□□ 1.9
CCDC7-203ENST00000362006 ANKRD30AQ9BXX3 1397 aa26.89■■□□□ 1.9
CCDC7-203ENST00000362006 NAIPQ13075 1403 aa26.88■■□□□ 1.89
CCDC7-203ENST00000362006 SCAPERQ9BY12 1400 aa26.87■■□□□ 1.89
CCDC7-203ENST00000362006 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
CCDC7-203ENST00000362006 TEX14Q8IWB6 1497 aa26.87■■□□□ 1.89
CCDC7-203ENST00000362006 NCOA1Q15788 1441 aa26.86■■□□□ 1.89
CCDC7-203ENST00000362006 RAB3GAP2Q9H2M9 1393 aa26.86■■□□□ 1.89
CCDC7-203ENST00000362006 RRP7BPQ9NSQ0 103 aa26.85■■□□□ 1.89
CCDC7-203ENST00000362006 TRAPPC8Q9Y2L5 1435 aa26.84■■□□□ 1.89
CCDC7-203ENST00000362006 ACIN1Q9UKV3 1341 aaKnown RBP26.84■■□□□ 1.89
CCDC7-203ENST00000362006 RTEL1-TNFRSF6BF6WH68 1400 aa26.8■■□□□ 1.88
CCDC7-203ENST00000362006 TSPOAP1O95153 1857 aa26.8■■□□□ 1.88
CCDC7-203ENST00000362006 PPRC1Q5VV67 1664 aaKnown RBP26.8■■□□□ 1.88
CCDC7-203ENST00000362006 ZNF518AQ6AHZ1 1483 aa26.79■■□□□ 1.88
CCDC7-203ENST00000362006 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
CCDC7-203ENST00000362006 PLXNC1O60486 1568 aa26.77■■□□□ 1.88
CCDC7-203ENST00000362006 AFAP1Q8N556 730 aa26.77■■□□□ 1.88
CCDC7-203ENST00000362006 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.87
CCDC7-203ENST00000362006 POGZQ7Z3K3 1410 aa26.76■■□□□ 1.87
CCDC7-203ENST00000362006 KIF15Q9NS87 1388 aa26.73■■□□□ 1.87
CCDC7-203ENST00000362006 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
CCDC7-203ENST00000362006 KDM5CP41229 1560 aa26.71■■□□□ 1.87
CCDC7-203ENST00000362006 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.87
CCDC7-203ENST00000362006 ZFYVE16Q7Z3T8 1539 aa26.7■■□□□ 1.87
CCDC7-203ENST00000362006 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
CCDC7-203ENST00000362006 ATP7AQ04656 1500 aa26.69■■□□□ 1.86
CCDC7-203ENST00000362006 DUOX2Q9NRD8 1548 aa26.67■■□□□ 1.86
CCDC7-203ENST00000362006 MLH3Q9UHC1 1453 aa26.67■■□□□ 1.86
CCDC7-203ENST00000362006 RICTORQ6R327 1708 aa26.66■■□□□ 1.86
CCDC7-203ENST00000362006 KDM6BO15054 1643 aa26.66■■□□□ 1.86
CCDC7-203ENST00000362006 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
CCDC7-203ENST00000362006 DHX57Q6P158 1386 aaKnown RBP26.64■■□□□ 1.86
CCDC7-203ENST00000362006 MYT1LQ9UL68 1186 aa26.63■■□□□ 1.85
CCDC7-203ENST00000362006 HECW2Q9P2P5 1572 aa26.63■■□□□ 1.85
CCDC7-203ENST00000362006 KIDINS220Q9ULH0 1771 aa26.63■■□□□ 1.85
CCDC7-203ENST00000362006 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
CCDC7-203ENST00000362006 ERBINQ96RT1 1412 aa26.61■■□□□ 1.85
CCDC7-203ENST00000362006 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
CCDC7-203ENST00000362006 TRIM52Q96A61 297 aa26.58■■□□□ 1.85
CCDC7-203ENST00000362006 ZMYM4Q5VZL5 1548 aa26.58■■□□□ 1.85
CCDC7-203ENST00000362006 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
CCDC7-203ENST00000362006 ZEB1P37275 1124 aaPredicted RBP26.56■■□□□ 1.84
CCDC7-203ENST00000362006 MAGI2Q86UL8 1455 aa26.55■■□□□ 1.84
CCDC7-203ENST00000362006 DHX29Q7Z478 1369 aaKnown RBP26.54■■□□□ 1.84
CCDC7-203ENST00000362006 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
CCDC7-203ENST00000362006 A2MP01023 1474 aa26.49■■□□□ 1.83
CCDC7-203ENST00000362006 ABCA6Q8N139 1617 aa26.49■■□□□ 1.83
CCDC7-203ENST00000362006 KDM5DQ9BY66 1539 aa26.48■■□□□ 1.83
CCDC7-203ENST00000362006 UNC13BO14795 1591 aa26.48■■□□□ 1.83
CCDC7-203ENST00000362006 COL17A1Q9UMD9 1497 aaPredicted RBP26.47■■□□□ 1.83
CCDC7-203ENST00000362006 MPHOSPH9Q99550 1183 aa26.47■■□□□ 1.83
CCDC7-203ENST00000362006 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
CCDC7-203ENST00000362006 NUP155O75694 1391 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms