RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
COL6A6-201ENST00000358511 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
COL6A6-201ENST00000358511 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
COL6A6-201ENST00000358511 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
COL6A6-201ENST00000358511 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
COL6A6-201ENST00000358511 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
COL6A6-201ENST00000358511 FGD1P98174 961 aa11.04□□□□□ -0.64
COL6A6-201ENST00000358511 ZBTB7CA1YPR0 619 aa11.04□□□□□ -0.64
COL6A6-201ENST00000358511 NPHP1O15259 732 aa11.04□□□□□ -0.64
COL6A6-201ENST00000358511 KCNJ4P48050 445 aa11.04□□□□□ -0.64
COL6A6-201ENST00000358511 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
COL6A6-201ENST00000358511 RWDD1Q9H446 243 aaPredicted RBP11.02□□□□□ -0.64
COL6A6-201ENST00000358511 RALBP1Q15311 655 aa11.02□□□□□ -0.65
COL6A6-201ENST00000358511 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
COL6A6-201ENST00000358511 SKOR2Q2VWA4 1001 aaPredicted RBP11.02□□□□□ -0.65
COL6A6-201ENST00000358511 ZBED9Q6R2W3 1325 aa11.02□□□□□ -0.65
COL6A6-201ENST00000358511 PHLDB1Q86UU1 1377 aa11.02□□□□□ -0.65
COL6A6-201ENST00000358511 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-201ENST00000358511 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
COL6A6-201ENST00000358511 MTERF4Q7Z6M4 381 aaKnown RBP11.01□□□□□ -0.65
COL6A6-201ENST00000358511 CALRP27797 417 aaKnown RBP11.01□□□□□ -0.65
COL6A6-201ENST00000358511 RAB3GAP2Q9H2M9 1393 aa11.01□□□□□ -0.65
COL6A6-201ENST00000358511 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
COL6A6-201ENST00000358511 SETQ01105 290 aaPredicted RBP11□□□□□ -0.65
COL6A6-201ENST00000358511 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
COL6A6-201ENST00000358511 HSPA5P11021 654 aaKnown RBP10.99□□□□□ -0.65
COL6A6-201ENST00000358511 FAM161AQ3B820 660 aa10.99□□□□□ -0.65
COL6A6-201ENST00000358511 PDE4AP27815 886 aa10.99□□□□□ -0.65
COL6A6-201ENST00000358511 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
COL6A6-201ENST00000358511 ZNF771Q7L3S4 317 aaPredicted RBP10.99□□□□□ -0.65
COL6A6-201ENST00000358511 TMF1P82094 1093 aa10.99□□□□□ -0.65
COL6A6-201ENST00000358511 MAP7D2Q96T17 732 aa10.98□□□□□ -0.65
COL6A6-201ENST00000358511 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
COL6A6-201ENST00000358511 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
COL6A6-201ENST00000358511 PDE3BQ13370 1112 aa10.98□□□□□ -0.65
COL6A6-201ENST00000358511 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
COL6A6-201ENST00000358511 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
COL6A6-201ENST00000358511 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
COL6A6-201ENST00000358511 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
COL6A6-201ENST00000358511 MFAP1P55081 439 aaKnown RBP10.97□□□□□ -0.65
COL6A6-201ENST00000358511 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
COL6A6-201ENST00000358511 TPM4P67936 248 aa10.96□□□□□ -0.65
COL6A6-201ENST00000358511 FAM43AQ8N2R8 423 aa10.96□□□□□ -0.65
COL6A6-201ENST00000358511 FAM13BQ9NYF5 915 aa10.96□□□□□ -0.65
COL6A6-201ENST00000358511 KIAA1211Q6ZU35 1233 aa10.96□□□□□ -0.66
COL6A6-201ENST00000358511 NACADO15069 1562 aa10.94□□□□□ -0.66
COL6A6-201ENST00000358511 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
COL6A6-201ENST00000358511 NAP1L2Q9ULW6 460 aaPredicted RBP10.94□□□□□ -0.66
COL6A6-201ENST00000358511 ST18O60284 1047 aa10.94□□□□□ -0.66
COL6A6-201ENST00000358511 KIF16BQ96L93 1317 aa10.94□□□□□ -0.66
COL6A6-201ENST00000358511 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
COL6A6-201ENST00000358511 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
COL6A6-201ENST00000358511 NOC3LQ8WTT2 800 aaKnown RBP10.93□□□□□ -0.66
COL6A6-201ENST00000358511 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
COL6A6-201ENST00000358511 CFDP1Q9UEE9 299 aaPredicted RBP10.93□□□□□ -0.66
COL6A6-201ENST00000358511 TPM2P07951 284 aa10.92□□□□□ -0.66
COL6A6-201ENST00000358511 TEX35Q5T0J7 233 aa10.92□□□□□ -0.66
COL6A6-201ENST00000358511 KIF15Q9NS87 1388 aa10.91□□□□□ -0.66
COL6A6-201ENST00000358511 GNL2Q13823 731 aaKnown RBP10.91□□□□□ -0.66
COL6A6-201ENST00000358511 DDX49Q9Y6V7 483 aaKnown RBP10.91□□□□□ -0.66
COL6A6-201ENST00000358511 SOGA1O94964 1423 aa10.91□□□□□ -0.66
COL6A6-201ENST00000358511 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
COL6A6-201ENST00000358511 GPS2Q13227 327 aa10.91□□□□□ -0.66
COL6A6-201ENST00000358511 RRP1P56182 461 aaKnown RBP10.9□□□□□ -0.66
COL6A6-201ENST00000358511 KCNH8Q96L42 1107 aa10.9□□□□□ -0.66
COL6A6-201ENST00000358511 PODXL2Q9NZ53 605 aa10.9□□□□□ -0.66
COL6A6-201ENST00000358511 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
COL6A6-201ENST00000358511 C14orf37Q86TY3 774 aa10.9□□□□□ -0.67
COL6A6-201ENST00000358511 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.67
COL6A6-201ENST00000358511 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
COL6A6-201ENST00000358511 FMN1Q68DA7 1419 aa10.89□□□□□ -0.67
COL6A6-201ENST00000358511 RRP9O43818 475 aaKnown RBP10.88□□□□□ -0.67
COL6A6-201ENST00000358511 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
COL6A6-201ENST00000358511 NFKBIBQ15653 356 aa10.88□□□□□ -0.67
COL6A6-201ENST00000358511 CENPJQ9HC77 1338 aaPredicted RBP10.88□□□□□ -0.67
COL6A6-201ENST00000358511 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
COL6A6-201ENST00000358511 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
COL6A6-201ENST00000358511 ATP6V1DQ9Y5K8 247 aa10.87□□□□□ -0.67
COL6A6-201ENST00000358511 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
COL6A6-201ENST00000358511 CCDC34Q96HJ3 373 aa10.87□□□□□ -0.67
COL6A6-201ENST00000358511 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
COL6A6-201ENST00000358511 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
COL6A6-201ENST00000358511 PDE4CQ08493 712 aa10.87□□□□□ -0.67
COL6A6-201ENST00000358511 DHX57Q6P158 1386 aaKnown RBP10.86□□□□□ -0.67
COL6A6-201ENST00000358511 WIZO95785 1651 aa10.86□□□□□ -0.67
COL6A6-201ENST00000358511 MORC1Q86VD1 984 aa10.86□□□□□ -0.67
COL6A6-201ENST00000358511 MRE11P49959 708 aa10.86□□□□□ -0.67
COL6A6-201ENST00000358511 CCDC66A2RUB6 948 aa10.85□□□□□ -0.67
COL6A6-201ENST00000358511 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
COL6A6-201ENST00000358511 BRPF3Q9ULD4 1205 aa10.85□□□□□ -0.67
COL6A6-201ENST00000358511 PLEKHD1A6NEE1 506 aa10.85□□□□□ -0.67
COL6A6-201ENST00000358511 NASPP49321 788 aaPredicted RBP10.84□□□□□ -0.67
COL6A6-201ENST00000358511 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
COL6A6-201ENST00000358511 FOXD4L1Q9NU39 408 aa10.84□□□□□ -0.67
COL6A6-201ENST00000358511 GOLGA6L19H0YKK7 550 aa10.83□□□□□ -0.68
COL6A6-201ENST00000358511 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
COL6A6-201ENST00000358511 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
COL6A6-201ENST00000358511 CGNL1Q0VF96 1302 aa10.83□□□□□ -0.68
COL6A6-201ENST00000358511 GPATCH3Q96I76 525 aa10.83□□□□□ -0.68
COL6A6-201ENST00000358511 CHMP5Q9NZZ3 219 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms