RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 TTC37Q6PGP7 1564 aa21.32■■□□□ 1
USP6-202ENST00000357482 RAPGEF3O95398 923 aa21.31■■□□□ 1
USP6-202ENST00000357482 CLIP1P30622 1438 aa21.29■■□□□ 1
USP6-202ENST00000357482 FANCAO15360 1455 aa21.29■■□□□ 1
USP6-202ENST00000357482 SUPT16HQ9Y5B9 1047 aaKnown RBP21.29■■□□□ 1
USP6-202ENST00000357482 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
USP6-202ENST00000357482 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
USP6-202ENST00000357482 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
USP6-202ENST00000357482 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
USP6-202ENST00000357482 AKNAQ7Z591 1439 aa21.25■□□□□ 0.99
USP6-202ENST00000357482 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
USP6-202ENST00000357482 LRRIQ1Q96JM4 1722 aa21.24■□□□□ 0.99
USP6-202ENST00000357482 KIF14Q15058 1648 aa21.24■□□□□ 0.99
USP6-202ENST00000357482 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
USP6-202ENST00000357482 DENND4BO75064 1496 aaPredicted RBP21.23■□□□□ 0.99
USP6-202ENST00000357482 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
USP6-202ENST00000357482 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
USP6-202ENST00000357482 FRMPD1Q5SYB0 1578 aa21.22■□□□□ 0.99
USP6-202ENST00000357482 UBE2Q2Q8WVN8 375 aa21.21■□□□□ 0.99
USP6-202ENST00000357482 PLCH2O75038 1416 aa21.2■□□□□ 0.98
USP6-202ENST00000357482 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
USP6-202ENST00000357482 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
USP6-202ENST00000357482 ERICH6BQ5W0A0 696 aa21.19■□□□□ 0.98
USP6-202ENST00000357482 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
USP6-202ENST00000357482 EFCAB2Q5VUJ9 269 aa21.17■□□□□ 0.98
USP6-202ENST00000357482 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
USP6-202ENST00000357482 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
USP6-202ENST00000357482 SCAPERQ9BY12 1400 aa21.14■□□□□ 0.98
USP6-202ENST00000357482 ARHGAP5Q13017 1502 aa21.14■□□□□ 0.98
USP6-202ENST00000357482 ARHGEF40Q8TER5 1519 aa21.11■□□□□ 0.97
USP6-202ENST00000357482 POGZQ7Z3K3 1410 aa21.09■□□□□ 0.97
USP6-202ENST00000357482 ZMYM4Q5VZL5 1548 aa21.08■□□□□ 0.97
USP6-202ENST00000357482 ZFYVE16Q7Z3T8 1539 aa21.08■□□□□ 0.97
USP6-202ENST00000357482 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
USP6-202ENST00000357482 MAGI2Q86UL8 1455 aa21.05■□□□□ 0.96
USP6-202ENST00000357482 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
USP6-202ENST00000357482 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
USP6-202ENST00000357482 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
USP6-202ENST00000357482 BCORL1Q5H9F3 1711 aa21.02■□□□□ 0.96
USP6-202ENST00000357482 ZNF518AQ6AHZ1 1483 aa21.02■□□□□ 0.96
USP6-202ENST00000357482 MTUS2Q5JR59 1369 aa21.02■□□□□ 0.95
USP6-202ENST00000357482 ADAMTSL3P82987 1691 aa21.01■□□□□ 0.95
USP6-202ENST00000357482 MIER1Q8N108 512 aa21■□□□□ 0.95
USP6-202ENST00000357482 DAXXQ9UER7 740 aaPredicted RBP21■□□□□ 0.95
USP6-202ENST00000357482 AFAP1Q8N556 730 aa21■□□□□ 0.95
USP6-202ENST00000357482 ZNF777Q9ULD5 760 aaPredicted RBP21■□□□□ 0.95
USP6-202ENST00000357482 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
USP6-202ENST00000357482 EIF5BO60841 1220 aaKnown RBP20.99■□□□□ 0.95
USP6-202ENST00000357482 MADDQ8WXG6 1647 aa20.98■□□□□ 0.95
USP6-202ENST00000357482 PTPRMP28827 1452 aa20.97■□□□□ 0.95
USP6-202ENST00000357482 MLECQ14165 292 aa20.97■□□□□ 0.95
USP6-202ENST00000357482 ATP10AO60312 1499 aa20.95■□□□□ 0.95
USP6-202ENST00000357482 ABCC1P33527 1531 aa20.95■□□□□ 0.94
USP6-202ENST00000357482 HECW2Q9P2P5 1572 aa20.95■□□□□ 0.94
USP6-202ENST00000357482 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
USP6-202ENST00000357482 KDM5CP41229 1560 aa20.94■□□□□ 0.94
USP6-202ENST00000357482 C9orf84Q5VXU9 1444 aa20.94■□□□□ 0.94
USP6-202ENST00000357482 GPATCH8Q9UKJ3 1502 aaKnown RBP20.93■□□□□ 0.94
USP6-202ENST00000357482 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
USP6-202ENST00000357482 SIGLEC1Q9BZZ2 1709 aa20.93■□□□□ 0.94
USP6-202ENST00000357482 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
USP6-202ENST00000357482 ITSN2Q9NZM3 1697 aa20.93■□□□□ 0.94
USP6-202ENST00000357482 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
USP6-202ENST00000357482 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
USP6-202ENST00000357482 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
USP6-202ENST00000357482 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
USP6-202ENST00000357482 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.93
USP6-202ENST00000357482 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
USP6-202ENST00000357482 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.93
USP6-202ENST00000357482 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
USP6-202ENST00000357482 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
USP6-202ENST00000357482 DIP2CQ9Y2E4 1556 aa20.87■□□□□ 0.93
USP6-202ENST00000357482 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
USP6-202ENST00000357482 ABCA6Q8N139 1617 aa20.85■□□□□ 0.93
USP6-202ENST00000357482 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
USP6-202ENST00000357482 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
USP6-202ENST00000357482 PLEKHH2Q8IVE3 1493 aa20.84■□□□□ 0.93
USP6-202ENST00000357482 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.92
USP6-202ENST00000357482 SPAG9O60271 1321 aaKnown RBP20.82■□□□□ 0.92
USP6-202ENST00000357482 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
USP6-202ENST00000357482 KIDINS220Q9ULH0 1771 aa20.8■□□□□ 0.92
USP6-202ENST00000357482 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
USP6-202ENST00000357482 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
USP6-202ENST00000357482 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
USP6-202ENST00000357482 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
USP6-202ENST00000357482 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
USP6-202ENST00000357482 ESF1Q9H501 851 aaKnown RBP20.77■□□□□ 0.92
USP6-202ENST00000357482 ATP7AQ04656 1500 aa20.75■□□□□ 0.91
USP6-202ENST00000357482 LRRC9Q6ZRR7 1453 aa20.74■□□□□ 0.91
USP6-202ENST00000357482 AGLP35573 1532 aa20.73■□□□□ 0.91
USP6-202ENST00000357482 CEBPAP49715 358 aaPredicted RBP20.72■□□□□ 0.91
USP6-202ENST00000357482 LMTK3Q96Q04 1460 aa20.72■□□□□ 0.91
USP6-202ENST00000357482 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
USP6-202ENST00000357482 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
USP6-202ENST00000357482 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
USP6-202ENST00000357482 CAMSAP2Q08AD1 1489 aa20.69■□□□□ 0.9
USP6-202ENST00000357482 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
USP6-202ENST00000357482 MSH5O43196 834 aa20.68■□□□□ 0.9
USP6-202ENST00000357482 HSPA2P54652 639 aa20.68■□□□□ 0.9
USP6-202ENST00000357482 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms