RNA–Protein interactions for RNA: ENST00000357384.8

RPRD1A-201, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPRD1A, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-201ENST00000357384 RICTORQ6R327 1708 aa28.65■■■□□ 2.18
RPRD1A-201ENST00000357384 FRMPD1Q5SYB0 1578 aa28.65■■■□□ 2.18
RPRD1A-201ENST00000357384 MAP3K1Q13233 1512 aa28.64■■■□□ 2.17
RPRD1A-201ENST00000357384 ITSN2Q9NZM3 1697 aa28.63■■■□□ 2.17
RPRD1A-201ENST00000357384 LRRC9Q6ZRR7 1453 aa28.63■■■□□ 2.17
RPRD1A-201ENST00000357384 EFCAB2Q5VUJ9 269 aa28.61■■■□□ 2.17
RPRD1A-201ENST00000357384 DENND4BO75064 1496 aaPredicted RBP28.61■■■□□ 2.17
RPRD1A-201ENST00000357384 RAPGEF3O95398 923 aa28.6■■■□□ 2.17
RPRD1A-201ENST00000357384 APLP2Q06481 763 aa28.6■■■□□ 2.17
RPRD1A-201ENST00000357384 CCNB3Q8WWL7 1395 aa28.6■■■□□ 2.17
RPRD1A-201ENST00000357384 GPATCH8Q9UKJ3 1502 aaKnown RBP28.59■■■□□ 2.17
RPRD1A-201ENST00000357384 NCOA2Q15596 1464 aa28.57■■■□□ 2.16
RPRD1A-201ENST00000357384 SCAPERQ9BY12 1400 aa28.57■■■□□ 2.16
RPRD1A-201ENST00000357384 ABCC1P33527 1531 aa28.54■■■□□ 2.16
RPRD1A-201ENST00000357384 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
RPRD1A-201ENST00000357384 KANK4Q5T7N3 995 aaPredicted RBP28.53■■■□□ 2.16
RPRD1A-201ENST00000357384 POGZQ7Z3K3 1410 aa28.52■■■□□ 2.16
RPRD1A-201ENST00000357384 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
RPRD1A-201ENST00000357384 ZMYM4Q5VZL5 1548 aa28.49■■■□□ 2.15
RPRD1A-201ENST00000357384 CFDP1Q9UEE9 299 aaPredicted RBP28.49■■■□□ 2.15
RPRD1A-201ENST00000357384 SYCP2Q9BX26 1530 aa28.47■■■□□ 2.15
RPRD1A-201ENST00000357384 ZNF518AQ6AHZ1 1483 aa28.46■■■□□ 2.15
RPRD1A-201ENST00000357384 ARHGEF40Q8TER5 1519 aa28.45■■■□□ 2.15
RPRD1A-201ENST00000357384 ARHGEF12Q9NZN5 1544 aa28.44■■■□□ 2.14
RPRD1A-201ENST00000357384 KDM5CP41229 1560 aa28.42■■■□□ 2.14
RPRD1A-201ENST00000357384 ZFYVE16Q7Z3T8 1539 aa28.42■■■□□ 2.14
RPRD1A-201ENST00000357384 HECW2Q9P2P5 1572 aa28.4■■■□□ 2.14
RPRD1A-201ENST00000357384 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.14
RPRD1A-201ENST00000357384 TRAPPC8Q9Y2L5 1435 aa28.38■■■□□ 2.13
RPRD1A-201ENST00000357384 AFAP1Q8N556 730 aa28.37■■■□□ 2.13
RPRD1A-201ENST00000357384 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
RPRD1A-201ENST00000357384 YEATS2Q9ULM3 1422 aa28.36■■■□□ 2.13
RPRD1A-201ENST00000357384 CAMSAP2Q08AD1 1489 aa28.36■■■□□ 2.13
RPRD1A-201ENST00000357384 ZNF644Q9H582 1327 aaPredicted RBP28.35■■■□□ 2.13
RPRD1A-201ENST00000357384 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
RPRD1A-201ENST00000357384 MYT1LQ9UL68 1186 aa28.34■■■□□ 2.13
RPRD1A-201ENST00000357384 HNRNPMP52272 730 aaKnown RBP eCLIP28.32■■■□□ 2.129e-6■■■■□ 22.2
RPRD1A-201ENST00000357384 KIAA1107Q9UPP5 1409 aa28.32■■■□□ 2.12
RPRD1A-201ENST00000357384 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
RPRD1A-201ENST00000357384 KIDINS220Q9ULH0 1771 aa28.29■■■□□ 2.12
RPRD1A-201ENST00000357384 SIGLEC1Q9BZZ2 1709 aa28.28■■■□□ 2.12
RPRD1A-201ENST00000357384 DIP2CQ9Y2E4 1556 aa28.27■■■□□ 2.12
RPRD1A-201ENST00000357384 MLH3Q9UHC1 1453 aa28.27■■■□□ 2.12
RPRD1A-201ENST00000357384 INO80Q9ULG1 1556 aaPredicted RBP28.24■■■□□ 2.11
RPRD1A-201ENST00000357384 MIA2Q96PC5 1412 aa28.24■■■□□ 2.11
RPRD1A-201ENST00000357384 MBD5Q9P267 1494 aa28.24■■■□□ 2.11
RPRD1A-201ENST00000357384 ATP7AQ04656 1500 aa28.23■■■□□ 2.11
RPRD1A-201ENST00000357384 PTPN23Q9H3S7 1636 aa28.23■■■□□ 2.11
RPRD1A-201ENST00000357384 ARID4BQ4LE39 1312 aaPredicted RBP28.23■■■□□ 2.11
RPRD1A-201ENST00000357384 ATP10AO60312 1499 aa28.21■■■□□ 2.11
RPRD1A-201ENST00000357384 CCDC141Q6ZP82 1450 aa28.21■■■□□ 2.11
RPRD1A-201ENST00000357384 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
RPRD1A-201ENST00000357384 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
RPRD1A-201ENST00000357384 BCORL1Q5H9F3 1711 aa28.2■■■□□ 2.11
RPRD1A-201ENST00000357384 ARHGEF5Q12774 1597 aa28.2■■■□□ 2.11
RPRD1A-201ENST00000357384 KDM4FA0A1W2PPD8 638 aa28.2■■■□□ 2.1
RPRD1A-201ENST00000357384 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
RPRD1A-201ENST00000357384 FGD6Q6ZV73 1430 aa28.18■■■□□ 2.1
RPRD1A-201ENST00000357384 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
RPRD1A-201ENST00000357384 REREQ9P2R6 1566 aa28.14■■■□□ 2.1
RPRD1A-201ENST00000357384 ADAMTSL3P82987 1691 aa28.12■■■□□ 2.09
RPRD1A-201ENST00000357384 ADGBQ8N7X0 1667 aa28.12■■■□□ 2.09
RPRD1A-201ENST00000357384 CROCC2H7BZ55 1655 aa28.12■■■□□ 2.09
RPRD1A-201ENST00000357384 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
RPRD1A-201ENST00000357384 TCOF1Q13428 1488 aaKnown RBP28.09■■■□□ 2.09
RPRD1A-201ENST00000357384 RSPH4AQ5TD94 716 aa28.08■■■□□ 2.09
RPRD1A-201ENST00000357384 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
RPRD1A-201ENST00000357384 DNMT1P26358 1616 aaKnown RBP28.06■■■□□ 2.08
RPRD1A-201ENST00000357384 MLECQ14165 292 aa28.06■■■□□ 2.08
RPRD1A-201ENST00000357384 RTEL1-TNFRSF6BF6WH68 1400 aa28.06■■■□□ 2.08
RPRD1A-201ENST00000357384 RIMS1Q86UR5 1692 aaKnown RBP28.06■■■□□ 2.08
RPRD1A-201ENST00000357384 MAST1Q9Y2H9 1570 aa28.05■■■□□ 2.08
RPRD1A-201ENST00000357384 PLXNC1O60486 1568 aa28.04■■■□□ 2.08
RPRD1A-201ENST00000357384 TSPY4P0CV99 314 aa28.04■■■□□ 2.08
RPRD1A-201ENST00000357384 TSPY10P0CW01 314 aa28.04■■■□□ 2.08
RPRD1A-201ENST00000357384 A2MP01023 1474 aa28.03■■■□□ 2.08
RPRD1A-201ENST00000357384 AGLP35573 1532 aa28.02■■■□□ 2.08
RPRD1A-201ENST00000357384 FAM50AQ14320 339 aaKnown RBP28.01■■■□□ 2.07
RPRD1A-201ENST00000357384 DAPK1P53355 1430 aa28■■■□□ 2.07
RPRD1A-201ENST00000357384 SHANK2Q9UPX8 1470 aa27.98■■■□□ 2.07
RPRD1A-201ENST00000357384 ABCC5O15440 1437 aa27.98■■■□□ 2.07
RPRD1A-201ENST00000357384 PTPRMP28827 1452 aa27.93■■■□□ 2.06
RPRD1A-201ENST00000357384 DHX29Q7Z478 1369 aaKnown RBP27.89■■■□□ 2.06
RPRD1A-201ENST00000357384 PLPPR3Q6T4P5 718 aa27.86■■■□□ 2.05
RPRD1A-201ENST00000357384 CHIC2Q9UKJ5 165 aa27.86■■■□□ 2.05
RPRD1A-201ENST00000357384 DUOX2Q9NRD8 1548 aa27.84■■■□□ 2.05
RPRD1A-201ENST00000357384 EIF2AK4Q9P2K8 1649 aaKnown RBP27.84■■■□□ 2.05
RPRD1A-201ENST00000357384 KIF15Q9NS87 1388 aa27.84■■■□□ 2.05
RPRD1A-201ENST00000357384 CLTCQ00610 1675 aaKnown RBP27.84■■■□□ 2.05
RPRD1A-201ENST00000357384 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.04
RPRD1A-201ENST00000357384 GGT6Q6P531 493 aa27.82■■■□□ 2.04
RPRD1A-201ENST00000357384 KIF3BO15066 747 aa27.81■■■□□ 2.04
RPRD1A-201ENST00000357384 RRBP1Q9P2E9 1410 aaKnown RBP27.8■■■□□ 2.04
RPRD1A-201ENST00000357384 C3P01024 1663 aa27.8■■■□□ 2.04
RPRD1A-201ENST00000357384 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
RPRD1A-201ENST00000357384 RRP7BPQ9NSQ0 103 aa27.8■■■□□ 2.04
RPRD1A-201ENST00000357384 MROH2AA6NES4 1674 aa27.79■■■□□ 2.04
RPRD1A-201ENST00000357384 ADGRL2O95490 1459 aa27.79■■■□□ 2.04
RPRD1A-201ENST00000357384 ITGAEP38570 1179 aa27.78■■■□□ 2.04
RPRD1A-201ENST00000357384 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms