RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
FDPS-201ENST00000356657 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
FDPS-201ENST00000356657 FANCAO15360 1455 aa24.87■■□□□ 1.57
FDPS-201ENST00000356657 GPATCH8Q9UKJ3 1502 aaKnown RBP24.87■■□□□ 1.57
FDPS-201ENST00000356657 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
FDPS-201ENST00000356657 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
FDPS-201ENST00000356657 MYOM3Q5VTT5 1437 aa24.8■■□□□ 1.56
FDPS-201ENST00000356657 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
FDPS-201ENST00000356657 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
FDPS-201ENST00000356657 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
FDPS-201ENST00000356657 CFDP1Q9UEE9 299 aaPredicted RBP24.77■■□□□ 1.56
FDPS-201ENST00000356657 ADGRL1O94910 1474 aa24.75■■□□□ 1.55
FDPS-201ENST00000356657 ABCC1P33527 1531 aa24.74■■□□□ 1.55
FDPS-201ENST00000356657 SAMD9LQ8IVG5 1584 aa24.72■■□□□ 1.55
FDPS-201ENST00000356657 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
FDPS-201ENST00000356657 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
FDPS-201ENST00000356657 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
FDPS-201ENST00000356657 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
FDPS-201ENST00000356657 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
FDPS-201ENST00000356657 SCAPERQ9BY12 1400 aa24.67■■□□□ 1.54
FDPS-201ENST00000356657 CAMSAP2Q08AD1 1489 aa24.67■■□□□ 1.54
FDPS-201ENST00000356657 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
FDPS-201ENST00000356657 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
FDPS-201ENST00000356657 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.54
FDPS-201ENST00000356657 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.53
FDPS-201ENST00000356657 ZMYM4Q5VZL5 1548 aa24.63■■□□□ 1.53
FDPS-201ENST00000356657 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
FDPS-201ENST00000356657 ZNF777Q9ULD5 760 aaPredicted RBP24.63■■□□□ 1.53
FDPS-201ENST00000356657 RSPH4AQ5TD94 716 aa24.62■■□□□ 1.53
FDPS-201ENST00000356657 KDM5CP41229 1560 aa24.62■■□□□ 1.53
FDPS-201ENST00000356657 ARHGEF5Q12774 1597 aa24.62■■□□□ 1.53
FDPS-201ENST00000356657 FRMPD1Q5SYB0 1578 aa24.62■■□□□ 1.53
FDPS-201ENST00000356657 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
FDPS-201ENST00000356657 ARHGEF12Q9NZN5 1544 aa24.59■■□□□ 1.53
FDPS-201ENST00000356657 MBD5Q9P267 1494 aa24.58■■□□□ 1.53
FDPS-201ENST00000356657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.523e-6■□□□□ 10.4
FDPS-201ENST00000356657 CCDC141Q6ZP82 1450 aa24.56■■□□□ 1.52
FDPS-201ENST00000356657 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
FDPS-201ENST00000356657 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
FDPS-201ENST00000356657 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
FDPS-201ENST00000356657 HECW2Q9P2P5 1572 aa24.54■■□□□ 1.52
FDPS-201ENST00000356657 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
FDPS-201ENST00000356657 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
FDPS-201ENST00000356657 MLH3Q9UHC1 1453 aa24.53■■□□□ 1.52
FDPS-201ENST00000356657 DNMT1P26358 1616 aaKnown RBP24.51■■□□□ 1.51
FDPS-201ENST00000356657 HNRNPMP52272 730 aaKnown RBP eCLIP24.51■■□□□ 1.51
FDPS-201ENST00000356657 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
FDPS-201ENST00000356657 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
FDPS-201ENST00000356657 ARHGEF40Q8TER5 1519 aa24.49■■□□□ 1.51
FDPS-201ENST00000356657 CROCC2H7BZ55 1655 aa24.49■■□□□ 1.51
FDPS-201ENST00000356657 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
FDPS-201ENST00000356657 ZFYVE16Q7Z3T8 1539 aa24.49■■□□□ 1.51
FDPS-201ENST00000356657 INO80Q9ULG1 1556 aaPredicted RBP24.48■■□□□ 1.51
FDPS-201ENST00000356657 MAST1Q9Y2H9 1570 aa24.48■■□□□ 1.51
FDPS-201ENST00000356657 AFAP1Q8N556 730 aa24.47■■□□□ 1.51
FDPS-201ENST00000356657 ATP7AQ04656 1500 aa24.46■■□□□ 1.51
FDPS-201ENST00000356657 SPAG9O60271 1321 aaKnown RBP24.45■■□□□ 1.51
FDPS-201ENST00000356657 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
FDPS-201ENST00000356657 DAPK1P53355 1430 aa24.44■■□□□ 1.5
FDPS-201ENST00000356657 TSPY4P0CV99 314 aa24.44■■□□□ 1.5
FDPS-201ENST00000356657 TSPY10P0CW01 314 aa24.44■■□□□ 1.5
FDPS-201ENST00000356657 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
FDPS-201ENST00000356657 ABCC5O15440 1437 aa24.41■■□□□ 1.5
FDPS-201ENST00000356657 REREQ9P2R6 1566 aa24.41■■□□□ 1.5
FDPS-201ENST00000356657 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
FDPS-201ENST00000356657 PLXNC1O60486 1568 aa24.39■■□□□ 1.5
FDPS-201ENST00000356657 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.5
FDPS-201ENST00000356657 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.5
FDPS-201ENST00000356657 ABCA6Q8N139 1617 aa24.38■■□□□ 1.49
FDPS-201ENST00000356657 ATP10AO60312 1499 aa24.37■■□□□ 1.49
FDPS-201ENST00000356657 YEATS2Q9ULM3 1422 aa24.36■■□□□ 1.49
FDPS-201ENST00000356657 MYT1LQ9UL68 1186 aa24.35■■□□□ 1.49
FDPS-201ENST00000356657 ADGRL2O95490 1459 aa24.34■■□□□ 1.49
FDPS-201ENST00000356657 KDM4FA0A1W2PPD8 638 aa24.31■■□□□ 1.48
FDPS-201ENST00000356657 ANKRD30AQ9BXX3 1397 aa24.3■■□□□ 1.48
FDPS-201ENST00000356657 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
FDPS-201ENST00000356657 AGLP35573 1532 aa24.29■■□□□ 1.48
FDPS-201ENST00000356657 A2MP01023 1474 aa24.28■■□□□ 1.48
FDPS-201ENST00000356657 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
FDPS-201ENST00000356657 DUOX2Q9NRD8 1548 aa24.27■■□□□ 1.48
FDPS-201ENST00000356657 ARID4BQ4LE39 1312 aaPredicted RBP24.25■■□□□ 1.47
FDPS-201ENST00000356657 BCORL1Q5H9F3 1711 aa24.25■■□□□ 1.47
FDPS-201ENST00000356657 EIF2AK4Q9P2K8 1649 aaKnown RBP24.24■■□□□ 1.47
FDPS-201ENST00000356657 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
FDPS-201ENST00000356657 KIF15Q9NS87 1388 aa24.24■■□□□ 1.47
FDPS-201ENST00000356657 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
FDPS-201ENST00000356657 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
FDPS-201ENST00000356657 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
FDPS-201ENST00000356657 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
FDPS-201ENST00000356657 ITGAEP38570 1179 aa24.16■■□□□ 1.46
FDPS-201ENST00000356657 GCC2Q8IWJ2 1684 aa24.15■■□□□ 1.46
FDPS-201ENST00000356657 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
FDPS-201ENST00000356657 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
FDPS-201ENST00000356657 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
FDPS-201ENST00000356657 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
FDPS-201ENST00000356657 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
FDPS-201ENST00000356657 ADAMTSL3P82987 1691 aa24.11■■□□□ 1.45
FDPS-201ENST00000356657 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
FDPS-201ENST00000356657 DEPDC5O75140 1603 aa24.09■■□□□ 1.45
FDPS-201ENST00000356657 MADDQ8WXG6 1647 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms