RNA–Protein interactions for RNA: ENST00000356016.7

LCOR-202, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LCOR, Length 4,834 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-202ENST00000356016 GLIPR1L2Q4G1C9 344 aa19.78■□□□□ 0.76
LCOR-202ENST00000356016 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.761e-6■■■□□ 16.9
LCOR-202ENST00000356016 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
LCOR-202ENST00000356016 TAOK2Q9UL54 1235 aa19.77■□□□□ 0.76
LCOR-202ENST00000356016 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
LCOR-202ENST00000356016 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
LCOR-202ENST00000356016 CASC1Q6TDU7 716 aa19.75■□□□□ 0.75
LCOR-202ENST00000356016 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
LCOR-202ENST00000356016 KANK1Q14678 1352 aa19.73■□□□□ 0.75
LCOR-202ENST00000356016 PTMAP06454 111 aaKnown RBP19.73■□□□□ 0.75
LCOR-202ENST00000356016 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
LCOR-202ENST00000356016 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
LCOR-202ENST00000356016 APBB1O00213 710 aa19.72■□□□□ 0.75
LCOR-202ENST00000356016 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
LCOR-202ENST00000356016 DEKP35659 375 aaKnown RBP19.72■□□□□ 0.75
LCOR-202ENST00000356016 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
LCOR-202ENST00000356016 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
LCOR-202ENST00000356016 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
LCOR-202ENST00000356016 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
LCOR-202ENST00000356016 MS4A1P11836 297 aa19.68■□□□□ 0.74
LCOR-202ENST00000356016 OS9Q13438 667 aaPredicted RBP19.68■□□□□ 0.74
LCOR-202ENST00000356016 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
LCOR-202ENST00000356016 KIF3BO15066 747 aa19.68■□□□□ 0.74
LCOR-202ENST00000356016 ANKRD30AQ9BXX3 1397 aa19.68■□□□□ 0.74
LCOR-202ENST00000356016 RALBP1Q15311 655 aa19.67■□□□□ 0.74
LCOR-202ENST00000356016 ERICH6BQ5W0A0 696 aa19.67■□□□□ 0.74
LCOR-202ENST00000356016 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
LCOR-202ENST00000356016 ST20-MTHFSA0A0A6YYL1 179 aa19.66■□□□□ 0.74
LCOR-202ENST00000356016 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
LCOR-202ENST00000356016 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
LCOR-202ENST00000356016 DNTTIP2Q5QJE6 756 aaKnown RBP19.65■□□□□ 0.74
LCOR-202ENST00000356016 SLKQ9H2G2 1235 aaPredicted RBP19.65■□□□□ 0.74
LCOR-202ENST00000356016 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
LCOR-202ENST00000356016 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
LCOR-202ENST00000356016 NAP1L5Q96NT1 182 aaPredicted RBP19.62■□□□□ 0.73
LCOR-202ENST00000356016 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
LCOR-202ENST00000356016 KCNJ4P48050 445 aa19.62■□□□□ 0.73
LCOR-202ENST00000356016 HSCBQ8IWL3 235 aa19.62■□□□□ 0.73
LCOR-202ENST00000356016 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
LCOR-202ENST00000356016 CHMP4BQ9H444 224 aaKnown RBP19.61■□□□□ 0.73
LCOR-202ENST00000356016 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
LCOR-202ENST00000356016 FGD1P98174 961 aa19.59■□□□□ 0.73
LCOR-202ENST00000356016 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
LCOR-202ENST00000356016 JPH4Q96JJ6 628 aa19.58■□□□□ 0.73
LCOR-202ENST00000356016 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.72
LCOR-202ENST00000356016 NAP1L2Q9ULW6 460 aaPredicted RBP19.57■□□□□ 0.72
LCOR-202ENST00000356016 GOLGA2Q08379 1002 aa19.57■□□□□ 0.72
LCOR-202ENST00000356016 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
LCOR-202ENST00000356016 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
LCOR-202ENST00000356016 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
LCOR-202ENST00000356016 TCERG1O14776 1098 aaKnown RBP19.56■□□□□ 0.72
LCOR-202ENST00000356016 PLIN1O60240 522 aa19.56■□□□□ 0.72
LCOR-202ENST00000356016 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
LCOR-202ENST00000356016 TRAK1Q9UPV9 953 aa19.54■□□□□ 0.72
LCOR-202ENST00000356016 PANK3Q9H999 370 aa19.53■□□□□ 0.72
LCOR-202ENST00000356016 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
LCOR-202ENST00000356016 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.71
LCOR-202ENST00000356016 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
LCOR-202ENST00000356016 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
LCOR-202ENST00000356016 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
LCOR-202ENST00000356016 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
LCOR-202ENST00000356016 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
LCOR-202ENST00000356016 BCL2L13Q9BXK5 485 aa19.5■□□□□ 0.71
LCOR-202ENST00000356016 RWDD1Q9H446 243 aaPredicted RBP19.5■□□□□ 0.71
LCOR-202ENST00000356016 MFAP1P55081 439 aaKnown RBP19.49■□□□□ 0.71
LCOR-202ENST00000356016 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
LCOR-202ENST00000356016 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
LCOR-202ENST00000356016 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
LCOR-202ENST00000356016 EXOC6Q8TAG9 804 aa19.46■□□□□ 0.71
LCOR-202ENST00000356016 ZNF644Q9H582 1327 aaPredicted RBP19.45■□□□□ 0.7
LCOR-202ENST00000356016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.78e-7■■■□□ 17.7
LCOR-202ENST00000356016 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
LCOR-202ENST00000356016 TULP1O00294 542 aaPredicted RBP19.44■□□□□ 0.7
LCOR-202ENST00000356016 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
LCOR-202ENST00000356016 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
LCOR-202ENST00000356016 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
LCOR-202ENST00000356016 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
LCOR-202ENST00000356016 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
LCOR-202ENST00000356016 GOLGA6L4A6NEF3 574 aa19.43■□□□□ 0.7
LCOR-202ENST00000356016 CDK11BP21127 795 aaKnown RBP19.43■□□□□ 0.7
LCOR-202ENST00000356016 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
LCOR-202ENST00000356016 IGF1RP08069 1367 aa19.42■□□□□ 0.7
LCOR-202ENST00000356016 USP47Q96K76 1375 aa19.41■□□□□ 0.7
LCOR-202ENST00000356016 NPHP1O15259 732 aa19.41■□□□□ 0.7
LCOR-202ENST00000356016 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
LCOR-202ENST00000356016 KIF15Q9NS87 1388 aa19.41■□□□□ 0.7
LCOR-202ENST00000356016 SLC4A10Q6U841 1118 aa19.4■□□□□ 0.7
LCOR-202ENST00000356016 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.7
LCOR-202ENST00000356016 TERF2IPQ9NYB0 399 aa19.39■□□□□ 0.7
LCOR-202ENST00000356016 RSPH4AQ5TD94 716 aa19.39■□□□□ 0.69
LCOR-202ENST00000356016 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
LCOR-202ENST00000356016 MCCP23508 829 aa19.39■□□□□ 0.69
LCOR-202ENST00000356016 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
LCOR-202ENST00000356016 PMFBP1Q8TBY8 1022 aa19.38■□□□□ 0.69
LCOR-202ENST00000356016 APAF1O14727 1248 aa19.37■□□□□ 0.69
LCOR-202ENST00000356016 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
LCOR-202ENST00000356016 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
LCOR-202ENST00000356016 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
LCOR-202ENST00000356016 L1TD1Q5T7N2 865 aaKnown RBP19.36■□□□□ 0.69
LCOR-202ENST00000356016 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms