RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.86
HOXA1-202ENST00000355633 PTPRKQ15262 1439 aa20.39■□□□□ 0.86
HOXA1-202ENST00000355633 DNMT1P26358 1616 aaKnown RBP20.38■□□□□ 0.85
HOXA1-202ENST00000355633 HRCP23327 699 aa20.37■□□□□ 0.85
HOXA1-202ENST00000355633 DAPK1P53355 1430 aa20.35■□□□□ 0.85
HOXA1-202ENST00000355633 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
HOXA1-202ENST00000355633 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
HOXA1-202ENST00000355633 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
HOXA1-202ENST00000355633 ABCC5O15440 1437 aa20.33■□□□□ 0.85
HOXA1-202ENST00000355633 PLCH2O75038 1416 aa20.33■□□□□ 0.84
HOXA1-202ENST00000355633 ABCA9Q8IUA7 1624 aa20.32■□□□□ 0.84
HOXA1-202ENST00000355633 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
HOXA1-202ENST00000355633 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
HOXA1-202ENST00000355633 HFM1A2PYH4 1435 aa20.3■□□□□ 0.84
HOXA1-202ENST00000355633 MAPKBP1O60336 1514 aa20.3■□□□□ 0.84
HOXA1-202ENST00000355633 CHIC2Q9UKJ5 165 aa20.29■□□□□ 0.84
HOXA1-202ENST00000355633 CROCC2H7BZ55 1655 aa20.28■□□□□ 0.84
HOXA1-202ENST00000355633 ARAP3Q8WWN8 1544 aa20.28■□□□□ 0.84
HOXA1-202ENST00000355633 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
HOXA1-202ENST00000355633 NAIPQ13075 1403 aa20.26■□□□□ 0.83
HOXA1-202ENST00000355633 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
HOXA1-202ENST00000355633 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
HOXA1-202ENST00000355633 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
HOXA1-202ENST00000355633 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
HOXA1-202ENST00000355633 ROCK1Q13464 1354 aa20.25■□□□□ 0.83
HOXA1-202ENST00000355633 ZEB1P37275 1124 aaPredicted RBP20.24■□□□□ 0.83
HOXA1-202ENST00000355633 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
HOXA1-202ENST00000355633 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
HOXA1-202ENST00000355633 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
HOXA1-202ENST00000355633 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
HOXA1-202ENST00000355633 ADGBQ8N7X0 1667 aa20.23■□□□□ 0.83
HOXA1-202ENST00000355633 SHANK2Q9UPX8 1470 aa20.22■□□□□ 0.83
HOXA1-202ENST00000355633 KIAA1107Q9UPP5 1409 aa20.22■□□□□ 0.83
HOXA1-202ENST00000355633 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
HOXA1-202ENST00000355633 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
HOXA1-202ENST00000355633 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
HOXA1-202ENST00000355633 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
HOXA1-202ENST00000355633 ABCC1P33527 1531 aa20.2■□□□□ 0.82
HOXA1-202ENST00000355633 FANCAO15360 1455 aa20.19■□□□□ 0.82
HOXA1-202ENST00000355633 TSPY4P0CV99 314 aa20.19■□□□□ 0.82
HOXA1-202ENST00000355633 TSPY10P0CW01 314 aa20.19■□□□□ 0.82
HOXA1-202ENST00000355633 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
HOXA1-202ENST00000355633 CD109Q6YHK3 1445 aa20.17■□□□□ 0.82
HOXA1-202ENST00000355633 NCOA1Q15788 1441 aa20.17■□□□□ 0.82
HOXA1-202ENST00000355633 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
HOXA1-202ENST00000355633 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
HOXA1-202ENST00000355633 GLI2P10070 1586 aa20.14■□□□□ 0.81
HOXA1-202ENST00000355633 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
HOXA1-202ENST00000355633 KDM6BO15054 1643 aa20.13■□□□□ 0.81
HOXA1-202ENST00000355633 CFAP74Q9C0B2 1584 aa20.13■□□□□ 0.81
HOXA1-202ENST00000355633 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
HOXA1-202ENST00000355633 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
HOXA1-202ENST00000355633 DIP2BQ9P265 1576 aa20.11■□□□□ 0.81
HOXA1-202ENST00000355633 ADGRL1O94910 1474 aa20.1■□□□□ 0.81
HOXA1-202ENST00000355633 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
HOXA1-202ENST00000355633 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
HOXA1-202ENST00000355633 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
HOXA1-202ENST00000355633 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
HOXA1-202ENST00000355633 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
HOXA1-202ENST00000355633 ANKRD50Q9ULJ7 1429 aa20.06■□□□□ 0.8
HOXA1-202ENST00000355633 PLXNC1O60486 1568 aa20.05■□□□□ 0.8
HOXA1-202ENST00000355633 NEO1Q92859 1461 aa20.05■□□□□ 0.8
HOXA1-202ENST00000355633 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
HOXA1-202ENST00000355633 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
HOXA1-202ENST00000355633 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
HOXA1-202ENST00000355633 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.79
HOXA1-202ENST00000355633 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
HOXA1-202ENST00000355633 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
HOXA1-202ENST00000355633 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
HOXA1-202ENST00000355633 KIF13AQ9H1H9 1805 aa19.98■□□□□ 0.79
HOXA1-202ENST00000355633 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
HOXA1-202ENST00000355633 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
HOXA1-202ENST00000355633 POGZQ7Z3K3 1410 aa19.97■□□□□ 0.79
HOXA1-202ENST00000355633 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
HOXA1-202ENST00000355633 PPRC1Q5VV67 1664 aaKnown RBP19.95■□□□□ 0.78
HOXA1-202ENST00000355633 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
HOXA1-202ENST00000355633 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
HOXA1-202ENST00000355633 KDM5CP41229 1560 aa19.94■□□□□ 0.78
HOXA1-202ENST00000355633 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
HOXA1-202ENST00000355633 TEX14Q8IWB6 1497 aa19.94■□□□□ 0.78
HOXA1-202ENST00000355633 MYT1LQ9UL68 1186 aa19.93■□□□□ 0.78
HOXA1-202ENST00000355633 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
HOXA1-202ENST00000355633 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
HOXA1-202ENST00000355633 PZPP20742 1482 aa19.9■□□□□ 0.78
HOXA1-202ENST00000355633 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
HOXA1-202ENST00000355633 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.78
HOXA1-202ENST00000355633 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.78
HOXA1-202ENST00000355633 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
HOXA1-202ENST00000355633 MLH3Q9UHC1 1453 aa19.89■□□□□ 0.77
HOXA1-202ENST00000355633 NUP155O75694 1391 aa19.88■□□□□ 0.77
HOXA1-202ENST00000355633 UNC13BO14795 1591 aa19.88■□□□□ 0.77
HOXA1-202ENST00000355633 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
HOXA1-202ENST00000355633 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
HOXA1-202ENST00000355633 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.76
HOXA1-202ENST00000355633 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.76
HOXA1-202ENST00000355633 NEUROD1Q13562 356 aa19.83■□□□□ 0.76
HOXA1-202ENST00000355633 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
HOXA1-202ENST00000355633 EIF2AK4Q9P2K8 1649 aaKnown RBP19.82■□□□□ 0.76
HOXA1-202ENST00000355633 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
HOXA1-202ENST00000355633 FOXD1Q16676 465 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms