RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
PDLIM7-201ENST00000355572 PREX2Q70Z35 1606 aa27.2■■□□□ 1.95
PDLIM7-201ENST00000355572 YEATS2Q9ULM3 1422 aa27.2■■□□□ 1.94
PDLIM7-201ENST00000355572 SCAPERQ9BY12 1400 aa27.19■■□□□ 1.94
PDLIM7-201ENST00000355572 CDK11AQ9UQ88 783 aaPredicted RBP27.19■■□□□ 1.94
PDLIM7-201ENST00000355572 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
PDLIM7-201ENST00000355572 POGZQ7Z3K3 1410 aa27.17■■□□□ 1.94
PDLIM7-201ENST00000355572 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
PDLIM7-201ENST00000355572 MADDQ8WXG6 1647 aa27.14■■□□□ 1.94
PDLIM7-201ENST00000355572 ZFYVE16Q7Z3T8 1539 aa27.14■■□□□ 1.94
PDLIM7-201ENST00000355572 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
PDLIM7-201ENST00000355572 ARHGEF12Q9NZN5 1544 aa27.11■■□□□ 1.93
PDLIM7-201ENST00000355572 EFCAB2Q5VUJ9 269 aa27.1■■□□□ 1.93
PDLIM7-201ENST00000355572 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
PDLIM7-201ENST00000355572 KDM5CP41229 1560 aa27.08■■□□□ 1.93
PDLIM7-201ENST00000355572 ABCC1P33527 1531 aa27.07■■□□□ 1.92
PDLIM7-201ENST00000355572 HECW2Q9P2P5 1572 aa27.07■■□□□ 1.92
PDLIM7-201ENST00000355572 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
PDLIM7-201ENST00000355572 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
PDLIM7-201ENST00000355572 SAMD9LQ8IVG5 1584 aa27.04■■□□□ 1.92
PDLIM7-201ENST00000355572 PTPRMP28827 1452 aa27.03■■□□□ 1.92
PDLIM7-201ENST00000355572 TRAPPC8Q9Y2L5 1435 aa27.02■■□□□ 1.92
PDLIM7-201ENST00000355572 AFAP1Q8N556 730 aa27.02■■□□□ 1.92
PDLIM7-201ENST00000355572 GPATCH8Q9UKJ3 1502 aaKnown RBP27.01■■□□□ 1.91
PDLIM7-201ENST00000355572 ARID4BQ4LE39 1312 aaPredicted RBP27.01■■□□□ 1.91
PDLIM7-201ENST00000355572 ABCA6Q8N139 1617 aa27.01■■□□□ 1.91
PDLIM7-201ENST00000355572 ZNF518AQ6AHZ1 1483 aa27■■□□□ 1.91
PDLIM7-201ENST00000355572 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
PDLIM7-201ENST00000355572 KIDINS220Q9ULH0 1771 aa26.97■■□□□ 1.91
PDLIM7-201ENST00000355572 TIAM1Q13009 1591 aa26.96■■□□□ 1.91
PDLIM7-201ENST00000355572 ATP10AO60312 1499 aa26.95■■□□□ 1.91
PDLIM7-201ENST00000355572 FER1L4A9Z1Z3 1794 aa26.95■■□□□ 1.9
PDLIM7-201ENST00000355572 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
PDLIM7-201ENST00000355572 SYCP2Q9BX26 1530 aa26.93■■□□□ 1.9
PDLIM7-201ENST00000355572 C9orf84Q5VXU9 1444 aa26.92■■□□□ 1.9
PDLIM7-201ENST00000355572 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
PDLIM7-201ENST00000355572 MLH3Q9UHC1 1453 aa26.89■■□□□ 1.9
PDLIM7-201ENST00000355572 MLECQ14165 292 aa26.89■■□□□ 1.9
PDLIM7-201ENST00000355572 ZNF777Q9ULD5 760 aaPredicted RBP26.87■■□□□ 1.89
PDLIM7-201ENST00000355572 REREQ9P2R6 1566 aa26.85■■□□□ 1.89
PDLIM7-201ENST00000355572 VPS8Q8N3P4 1428 aa26.85■■□□□ 1.89
PDLIM7-201ENST00000355572 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
PDLIM7-201ENST00000355572 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.884e-8■■■■■ 27.6
PDLIM7-201ENST00000355572 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
PDLIM7-201ENST00000355572 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
PDLIM7-201ENST00000355572 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
PDLIM7-201ENST00000355572 NCOA2Q15596 1464 aa26.79■■□□□ 1.88
PDLIM7-201ENST00000355572 PLPPR3Q6T4P5 718 aa26.78■■□□□ 1.88
PDLIM7-201ENST00000355572 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
PDLIM7-201ENST00000355572 LMTK3Q96Q04 1460 aa26.78■■□□□ 1.88
PDLIM7-201ENST00000355572 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
PDLIM7-201ENST00000355572 ATP7AQ04656 1500 aa26.75■■□□□ 1.87
PDLIM7-201ENST00000355572 KIAA1107Q9UPP5 1409 aa26.75■■□□□ 1.87
PDLIM7-201ENST00000355572 AGLP35573 1532 aa26.75■■□□□ 1.87
PDLIM7-201ENST00000355572 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
PDLIM7-201ENST00000355572 LRRC9Q6ZRR7 1453 aa26.73■■□□□ 1.87
PDLIM7-201ENST00000355572 PLEKHH2Q8IVE3 1493 aa26.72■■□□□ 1.87
PDLIM7-201ENST00000355572 C3P01024 1663 aa26.7■■□□□ 1.87
PDLIM7-201ENST00000355572 KANK4Q5T7N3 995 aaPredicted RBP26.7■■□□□ 1.86
PDLIM7-201ENST00000355572 PLXNC1O60486 1568 aa26.69■■□□□ 1.86
PDLIM7-201ENST00000355572 CEBPAP49715 358 aaPredicted RBP26.69■■□□□ 1.86
PDLIM7-201ENST00000355572 CAMSAP2Q08AD1 1489 aa26.68■■□□□ 1.86
PDLIM7-201ENST00000355572 SPAG9O60271 1321 aaKnown RBP26.67■■□□□ 1.86
PDLIM7-201ENST00000355572 ADGBQ8N7X0 1667 aa26.67■■□□□ 1.86
PDLIM7-201ENST00000355572 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
PDLIM7-201ENST00000355572 PREX1Q8TCU6 1659 aa26.63■■□□□ 1.85
PDLIM7-201ENST00000355572 HSPA2P54652 639 aa26.61■■□□□ 1.85
PDLIM7-201ENST00000355572 A2MP01023 1474 aa26.6■■□□□ 1.85
PDLIM7-201ENST00000355572 CLTCQ00610 1675 aaKnown RBP26.57■■□□□ 1.84
PDLIM7-201ENST00000355572 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
PDLIM7-201ENST00000355572 ARHGEF5Q12774 1597 aa26.55■■□□□ 1.84
PDLIM7-201ENST00000355572 MROH2AA6NES4 1674 aa26.54■■□□□ 1.84
PDLIM7-201ENST00000355572 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
PDLIM7-201ENST00000355572 SETD1BQ9UPS6 1966 aaKnown RBP26.51■■□□□ 1.83
PDLIM7-201ENST00000355572 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
PDLIM7-201ENST00000355572 STRCQ7RTU9 1775 aa26.48■■□□□ 1.83
PDLIM7-201ENST00000355572 CNTLNQ9NXG0 1405 aa26.44■■□□□ 1.82
PDLIM7-201ENST00000355572 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
PDLIM7-201ENST00000355572 DHX29Q7Z478 1369 aaKnown RBP26.43■■□□□ 1.82
PDLIM7-201ENST00000355572 ILDR1Q86SU0 546 aaPredicted RBP26.42■■□□□ 1.82
PDLIM7-201ENST00000355572 GGT6Q6P531 493 aa26.41■■□□□ 1.82
PDLIM7-201ENST00000355572 CROCC2H7BZ55 1655 aa26.41■■□□□ 1.82
PDLIM7-201ENST00000355572 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
PDLIM7-201ENST00000355572 PTPN23Q9H3S7 1636 aa26.4■■□□□ 1.82
PDLIM7-201ENST00000355572 ZMYM3Q14202 1370 aa26.4■■□□□ 1.82
PDLIM7-201ENST00000355572 UHRF1BP1Q6BDS2 1440 aa26.39■■□□□ 1.82
PDLIM7-201ENST00000355572 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
PDLIM7-201ENST00000355572 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
PDLIM7-201ENST00000355572 PTPRKQ15262 1439 aa26.34■■□□□ 1.81
PDLIM7-201ENST00000355572 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
PDLIM7-201ENST00000355572 KIF3BO15066 747 aa26.32■■□□□ 1.8
PDLIM7-201ENST00000355572 MROH1Q8NDA8 1641 aa26.32■■□□□ 1.8
PDLIM7-201ENST00000355572 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
PDLIM7-201ENST00000355572 NPATQ14207 1427 aa26.31■■□□□ 1.8
PDLIM7-201ENST00000355572 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
PDLIM7-201ENST00000355572 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-201ENST00000355572 DNMT1P26358 1616 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-201ENST00000355572 ABCC5O15440 1437 aa26.3■■□□□ 1.8
PDLIM7-201ENST00000355572 FGD6Q6ZV73 1430 aa26.3■■□□□ 1.8
PDLIM7-201ENST00000355572 APLP2Q06481 763 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms