RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
HTT-201ENST00000355072 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
HTT-201ENST00000355072 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
HTT-201ENST00000355072 RALBP1Q15311 655 aa10.05□□□□□ -0.8
HTT-201ENST00000355072 HMGN5P82970 282 aaKnown RBP10.05□□□□□ -0.8
HTT-201ENST00000355072 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
HTT-201ENST00000355072 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
HTT-201ENST00000355072 SMARCA2P51531 1590 aa10.04□□□□□ -0.8
HTT-201ENST00000355072 PMFBP1Q8TBY8 1022 aa10.04□□□□□ -0.8
HTT-201ENST00000355072 ST18O60284 1047 aa10.04□□□□□ -0.8
HTT-201ENST00000355072 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
HTT-201ENST00000355072 NOC3LQ8WTT2 800 aaKnown RBP10.03□□□□□ -0.8
HTT-201ENST00000355072 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
HTT-201ENST00000355072 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
HTT-201ENST00000355072 MIER1Q8N108 512 aa10.03□□□□□ -0.8
HTT-201ENST00000355072 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
HTT-201ENST00000355072 CCP110O43303 1012 aa10.03□□□□□ -0.8
HTT-201ENST00000355072 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
HTT-201ENST00000355072 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.81
HTT-201ENST00000355072 ANKRD30AQ9BXX3 1397 aa10.02□□□□□ -0.81
HTT-201ENST00000355072 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.81
HTT-201ENST00000355072 ARXQ96QS3 562 aa10.01□□□□□ -0.81
HTT-201ENST00000355072 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
HTT-201ENST00000355072 GSE1Q14687 1217 aa10.01□□□□□ -0.81
HTT-201ENST00000355072 GPATCH3Q96I76 525 aa10□□□□□ -0.81
HTT-201ENST00000355072 CUX1P39880 1505 aa10□□□□□ -0.81
HTT-201ENST00000355072 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
HTT-201ENST00000355072 USP8P40818 1118 aa10□□□□□ -0.81
HTT-201ENST00000355072 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
HTT-201ENST00000355072 ROCK1Q13464 1354 aa10□□□□□ -0.81
HTT-201ENST00000355072 TPM2P07951 284 aa10□□□□□ -0.81
HTT-201ENST00000355072 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
HTT-201ENST00000355072 RRP9O43818 475 aaKnown RBP9.99□□□□□ -0.81
HTT-201ENST00000355072 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
HTT-201ENST00000355072 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
HTT-201ENST00000355072 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
HTT-201ENST00000355072 KANK1Q14678 1352 aa9.98□□□□□ -0.81
HTT-201ENST00000355072 RWDD1Q9H446 243 aaPredicted RBP9.98□□□□□ -0.81
HTT-201ENST00000355072 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
HTT-201ENST00000355072 FGD1P98174 961 aa9.98□□□□□ -0.81
HTT-201ENST00000355072 SETD5Q9C0A6 1442 aa9.98□□□□□ -0.81
HTT-201ENST00000355072 TPM1P09493 284 aa9.97□□□□□ -0.81
HTT-201ENST00000355072 HOOK1Q9UJC3 728 aaKnown RBP9.97□□□□□ -0.81
HTT-201ENST00000355072 HSP90B2PQ58FF3 399 aa9.96□□□□□ -0.81
HTT-201ENST00000355072 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.81
HTT-201ENST00000355072 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.81
HTT-201ENST00000355072 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
HTT-201ENST00000355072 LETM1O95202 739 aaPredicted RBP9.96□□□□□ -0.82
HTT-201ENST00000355072 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
HTT-201ENST00000355072 GNL2Q13823 731 aaKnown RBP9.95□□□□□ -0.82
HTT-201ENST00000355072 GOLGA6L7A0A1B0GV03 622 aa9.95□□□□□ -0.82
HTT-201ENST00000355072 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
HTT-201ENST00000355072 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
HTT-201ENST00000355072 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
HTT-201ENST00000355072 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
HTT-201ENST00000355072 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
HTT-201ENST00000355072 APPP05067 770 aa9.93□□□□□ -0.82
HTT-201ENST00000355072 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
HTT-201ENST00000355072 HMGB1P09429 215 aaKnown RBP9.93□□□□□ -0.82
HTT-201ENST00000355072 KCNJ4P48050 445 aa9.93□□□□□ -0.82
HTT-201ENST00000355072 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
HTT-201ENST00000355072 NAT10Q9H0A0 1025 aaKnown RBP9.93□□□□□ -0.82
HTT-201ENST00000355072 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
HTT-201ENST00000355072 AK7Q96M32 723 aa9.92□□□□□ -0.82
HTT-201ENST00000355072 TXLNBQ8N3L3 684 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 PDCL2Q8N4E4 241 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 TMF1P82094 1093 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
HTT-201ENST00000355072 ANKRD20A12PQ8NF67 263 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 REC8O95072 547 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 FAM107BQ9H098 131 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
HTT-201ENST00000355072 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
HTT-201ENST00000355072 FAM161AQ3B820 660 aa9.9□□□□□ -0.82
HTT-201ENST00000355072 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
HTT-201ENST00000355072 GOLGA6L19H0YKK7 550 aa9.89□□□□□ -0.83
HTT-201ENST00000355072 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
HTT-201ENST00000355072 CCDC39Q9UFE4 941 aa9.88□□□□□ -0.83
HTT-201ENST00000355072 ZNF771Q7L3S4 317 aaPredicted RBP9.88□□□□□ -0.83
HTT-201ENST00000355072 MRE11P49959 708 aa9.87□□□□□ -0.83
HTT-201ENST00000355072 ZRSR2Q15696 482 aaKnown RBP9.87□□□□□ -0.83
HTT-201ENST00000355072 IQCEQ6IPM2 695 aa9.87□□□□□ -0.83
HTT-201ENST00000355072 KIF21BO75037 1637 aa9.87□□□□□ -0.83
HTT-201ENST00000355072 RRP12Q5JTH9 1297 aaKnown RBP9.87□□□□□ -0.83
HTT-201ENST00000355072 SPAG9O60271 1321 aaKnown RBP9.87□□□□□ -0.83
HTT-201ENST00000355072 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
HTT-201ENST00000355072 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
HTT-201ENST00000355072 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
HTT-201ENST00000355072 NLRP13Q86W25 1043 aa9.85□□□□□ -0.83
HTT-201ENST00000355072 POLR3GO15318 223 aaPredicted RBP9.85□□□□□ -0.83
HTT-201ENST00000355072 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
HTT-201ENST00000355072 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
HTT-201ENST00000355072 LEKR1Q6ZMV7 388 aa9.85□□□□□ -0.83
HTT-201ENST00000355072 GOLGA2Q08379 1002 aa9.85□□□□□ -0.83
HTT-201ENST00000355072 RUFY1Q96T51 708 aa9.84□□□□□ -0.83
HTT-201ENST00000355072 NUCB2P80303 420 aa9.84□□□□□ -0.83
HTT-201ENST00000355072 MNS1Q8NEH6 495 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms