RNA–Protein interactions for RNA: ENST00000354530.2

CTSL3P-201, Transcript of cathepsin L family member 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CTSL3P, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3P-201ENST00000354530 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
CTSL3P-201ENST00000354530 PREX1Q8TCU6 1659 aa12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 ARID4BQ4LE39 1312 aaPredicted RBP12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
CTSL3P-201ENST00000354530 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
CTSL3P-201ENST00000354530 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
CTSL3P-201ENST00000354530 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
CTSL3P-201ENST00000354530 PLCH2O75038 1416 aa12.05□□□□□ -0.48
CTSL3P-201ENST00000354530 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
CTSL3P-201ENST00000354530 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
CTSL3P-201ENST00000354530 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
CTSL3P-201ENST00000354530 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 ARHGAP5Q13017 1502 aa12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 KDM5CP41229 1560 aa12.03□□□□□ -0.48
CTSL3P-201ENST00000354530 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
CTSL3P-201ENST00000354530 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
CTSL3P-201ENST00000354530 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
CTSL3P-201ENST00000354530 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.49
CTSL3P-201ENST00000354530 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
CTSL3P-201ENST00000354530 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
CTSL3P-201ENST00000354530 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
CTSL3P-201ENST00000354530 YEATS2Q9ULM3 1422 aa11.99□□□□□ -0.49
CTSL3P-201ENST00000354530 ATP10AO60312 1499 aa11.99□□□□□ -0.49
CTSL3P-201ENST00000354530 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
CTSL3P-201ENST00000354530 ABCC1P33527 1531 aa11.97□□□□□ -0.49
CTSL3P-201ENST00000354530 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
CTSL3P-201ENST00000354530 MROH2AA6NES4 1674 aa11.96□□□□□ -0.5
CTSL3P-201ENST00000354530 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
CTSL3P-201ENST00000354530 C3P01024 1663 aa11.95□□□□□ -0.5
CTSL3P-201ENST00000354530 TIAM1Q13009 1591 aa11.94□□□□□ -0.5
CTSL3P-201ENST00000354530 KIDINS220Q9ULH0 1771 aa11.94□□□□□ -0.5
CTSL3P-201ENST00000354530 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
CTSL3P-201ENST00000354530 AGLP35573 1532 aa11.93□□□□□ -0.5
CTSL3P-201ENST00000354530 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
CTSL3P-201ENST00000354530 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
CTSL3P-201ENST00000354530 GPATCH8Q9UKJ3 1502 aaKnown RBP11.92□□□□□ -0.5
CTSL3P-201ENST00000354530 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
CTSL3P-201ENST00000354530 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
CTSL3P-201ENST00000354530 SYCP2Q9BX26 1530 aa11.9□□□□□ -0.5
CTSL3P-201ENST00000354530 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
CTSL3P-201ENST00000354530 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
CTSL3P-201ENST00000354530 EHBP1L1Q8N3D4 1523 aa11.89□□□□□ -0.51
CTSL3P-201ENST00000354530 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
CTSL3P-201ENST00000354530 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
CTSL3P-201ENST00000354530 AFAP1Q8N556 730 aa11.88□□□□□ -0.51
CTSL3P-201ENST00000354530 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
CTSL3P-201ENST00000354530 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
CTSL3P-201ENST00000354530 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
CTSL3P-201ENST00000354530 MLECQ14165 292 aa11.86□□□□□ -0.51
CTSL3P-201ENST00000354530 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
CTSL3P-201ENST00000354530 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
CTSL3P-201ENST00000354530 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
CTSL3P-201ENST00000354530 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
CTSL3P-201ENST00000354530 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
CTSL3P-201ENST00000354530 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
CTSL3P-201ENST00000354530 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
CTSL3P-201ENST00000354530 PLPPR3Q6T4P5 718 aa11.83□□□□□ -0.52
CTSL3P-201ENST00000354530 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
CTSL3P-201ENST00000354530 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
CTSL3P-201ENST00000354530 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
CTSL3P-201ENST00000354530 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
CTSL3P-201ENST00000354530 MBD5Q9P267 1494 aa11.82□□□□□ -0.52
CTSL3P-201ENST00000354530 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
CTSL3P-201ENST00000354530 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
CTSL3P-201ENST00000354530 NPATQ14207 1427 aa11.8□□□□□ -0.52
CTSL3P-201ENST00000354530 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTSL3P-201ENST00000354530 HSPA2P54652 639 aa11.8□□□□□ -0.52
CTSL3P-201ENST00000354530 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
CTSL3P-201ENST00000354530 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
CTSL3P-201ENST00000354530 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
CTSL3P-201ENST00000354530 POLR1AO95602 1720 aaPredicted RBP11.79□□□□□ -0.52
CTSL3P-201ENST00000354530 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
CTSL3P-201ENST00000354530 PTPRTO14522 1441 aa11.77□□□□□ -0.52
CTSL3P-201ENST00000354530 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.52
CTSL3P-201ENST00000354530 MAP3K1Q13233 1512 aa11.77□□□□□ -0.52
CTSL3P-201ENST00000354530 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
CTSL3P-201ENST00000354530 A2MP01023 1474 aa11.76□□□□□ -0.53
CTSL3P-201ENST00000354530 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
CTSL3P-201ENST00000354530 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
CTSL3P-201ENST00000354530 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
CTSL3P-201ENST00000354530 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
CTSL3P-201ENST00000354530 ZC3H13Q5T200 1668 aaKnown RBP11.74□□□□□ -0.53
CTSL3P-201ENST00000354530 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
CTSL3P-201ENST00000354530 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
CTSL3P-201ENST00000354530 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
CTSL3P-201ENST00000354530 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
CTSL3P-201ENST00000354530 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
CTSL3P-201ENST00000354530 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
CTSL3P-201ENST00000354530 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
CTSL3P-201ENST00000354530 CROCC2H7BZ55 1655 aa11.7□□□□□ -0.54
CTSL3P-201ENST00000354530 EIF2AK4Q9P2K8 1649 aaKnown RBP11.7□□□□□ -0.54
CTSL3P-201ENST00000354530 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
CTSL3P-201ENST00000354530 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
CTSL3P-201ENST00000354530 ZMYM3Q14202 1370 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms