RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
COL11A1-201ENST00000353414 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
COL11A1-201ENST00000353414 NOL8Q76FK4 1167 aaKnown RBP12.79□□□□□ -0.36
COL11A1-201ENST00000353414 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-201ENST00000353414 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
COL11A1-201ENST00000353414 DCAF11Q8TEB1 546 aa12.77□□□□□ -0.37
COL11A1-201ENST00000353414 RAD21O60216 631 aa12.76□□□□□ -0.37
COL11A1-201ENST00000353414 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
COL11A1-201ENST00000353414 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
COL11A1-201ENST00000353414 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
COL11A1-201ENST00000353414 GORABQ5T7V8 394 aa12.75□□□□□ -0.37
COL11A1-201ENST00000353414 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
COL11A1-201ENST00000353414 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
COL11A1-201ENST00000353414 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
COL11A1-201ENST00000353414 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
COL11A1-201ENST00000353414 KIAA2012Q0VF49 1180 aa12.74□□□□□ -0.37
COL11A1-201ENST00000353414 FOXD1Q16676 465 aa12.74□□□□□ -0.37
COL11A1-201ENST00000353414 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
COL11A1-201ENST00000353414 CDCA8Q53HL2 280 aa12.73□□□□□ -0.37
COL11A1-201ENST00000353414 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
COL11A1-201ENST00000353414 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-201ENST00000353414 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-201ENST00000353414 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-201ENST00000353414 TOMM22Q9NS69 142 aa12.71□□□□□ -0.37
COL11A1-201ENST00000353414 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.38
COL11A1-201ENST00000353414 RASSF8Q8NHQ8 419 aa12.71□□□□□ -0.38
COL11A1-201ENST00000353414 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-201ENST00000353414 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
COL11A1-201ENST00000353414 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 MCCP23508 829 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
COL11A1-201ENST00000353414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-201ENST00000353414 NRDCO43847 1150 aa12.68□□□□□ -0.38
COL11A1-201ENST00000353414 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-201ENST00000353414 MSNP26038 577 aaKnown RBP12.68□□□□□ -0.38
COL11A1-201ENST00000353414 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-201ENST00000353414 ITPRIPQ8IWB1 547 aa12.68□□□□□ -0.38
COL11A1-201ENST00000353414 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-201ENST00000353414 NACADO15069 1562 aa12.67□□□□□ -0.38
COL11A1-201ENST00000353414 L1TD1Q5T7N2 865 aaKnown RBP12.66□□□□□ -0.38
COL11A1-201ENST00000353414 PES1O00541 588 aaKnown RBP12.66□□□□□ -0.38
COL11A1-201ENST00000353414 CLIP1P30622 1438 aa12.66□□□□□ -0.38
COL11A1-201ENST00000353414 MARCH6O60337 910 aa12.65□□□□□ -0.38
COL11A1-201ENST00000353414 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-201ENST00000353414 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-201ENST00000353414 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
COL11A1-201ENST00000353414 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
COL11A1-201ENST00000353414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.39
COL11A1-201ENST00000353414 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
COL11A1-201ENST00000353414 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
COL11A1-201ENST00000353414 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
COL11A1-201ENST00000353414 TMF1P82094 1093 aa12.63□□□□□ -0.39
COL11A1-201ENST00000353414 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-201ENST00000353414 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
COL11A1-201ENST00000353414 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-201ENST00000353414 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL11A1-201ENST00000353414 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-201ENST00000353414 EVA1CP58658 441 aa12.61□□□□□ -0.39
COL11A1-201ENST00000353414 HDGFL2Q7Z4V5 671 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-201ENST00000353414 KANK1Q14678 1352 aa12.6□□□□□ -0.39
COL11A1-201ENST00000353414 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
COL11A1-201ENST00000353414 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-201ENST00000353414 NECTIN2Q92692 538 aa12.59□□□□□ -0.39
COL11A1-201ENST00000353414 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
COL11A1-201ENST00000353414 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
COL11A1-201ENST00000353414 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
COL11A1-201ENST00000353414 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-201ENST00000353414 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
COL11A1-201ENST00000353414 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
COL11A1-201ENST00000353414 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
COL11A1-201ENST00000353414 CWC22Q9HCG8 908 aaKnown RBP12.55□□□□□ -0.4
COL11A1-201ENST00000353414 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
COL11A1-201ENST00000353414 AMPHP49418 695 aa12.55□□□□□ -0.4
COL11A1-201ENST00000353414 MS4A1P11836 297 aa12.54□□□□□ -0.4
COL11A1-201ENST00000353414 KDM4AO75164 1064 aa12.54□□□□□ -0.4
COL11A1-201ENST00000353414 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-201ENST00000353414 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
COL11A1-201ENST00000353414 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
COL11A1-201ENST00000353414 FOSBP53539 338 aa12.53□□□□□ -0.4
COL11A1-201ENST00000353414 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
COL11A1-201ENST00000353414 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-201ENST00000353414 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-201ENST00000353414 CCNB3Q8WWL7 1395 aa12.53□□□□□ -0.4
COL11A1-201ENST00000353414 TRIM34Q9BYJ4 488 aa12.53□□□□□ -0.4
COL11A1-201ENST00000353414 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
COL11A1-201ENST00000353414 SPAG9O60271 1321 aaKnown RBP12.51□□□□□ -0.41
COL11A1-201ENST00000353414 CCAR2Q8N163 923 aaKnown RBP12.51□□□□□ -0.41
COL11A1-201ENST00000353414 TPD52L1Q16890 204 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-201ENST00000353414 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
COL11A1-201ENST00000353414 FYB1O15117 783 aa12.49□□□□□ -0.41
COL11A1-201ENST00000353414 TPM4P67936 248 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms