RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 SYAP1Q96A49 352 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP2-201ENST00000349780 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
CDK5RAP2-201ENST00000349780 FRAT2O75474 233 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP2-201ENST00000349780 MFAP1P55081 439 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP2-201ENST00000349780 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP2-201ENST00000349780 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
CDK5RAP2-201ENST00000349780 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
CDK5RAP2-201ENST00000349780 ZNF777Q9ULD5 760 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP2-201ENST00000349780 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
CDK5RAP2-201ENST00000349780 DDX49Q9Y6V7 483 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP2-201ENST00000349780 GOLGA6L1Q8N7Z2 621 aa14.82□□□□□ -0.04
CDK5RAP2-201ENST00000349780 CCDC66A2RUB6 948 aa14.82□□□□□ -0.04
CDK5RAP2-201ENST00000349780 CENPQQ7L2Z9 268 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP2-201ENST00000349780 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP2-201ENST00000349780 SETQ01105 290 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP2-201ENST00000349780 CCNB3Q8WWL7 1395 aa14.8□□□□□ -0.04
CDK5RAP2-201ENST00000349780 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
CDK5RAP2-201ENST00000349780 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP2-201ENST00000349780 PDCL3Q9H2J4 239 aa14.8□□□□□ -0.04
CDK5RAP2-201ENST00000349780 GOLGA6L4A6NEF3 574 aa14.79□□□□□ -0.04
CDK5RAP2-201ENST00000349780 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
CDK5RAP2-201ENST00000349780 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP2-201ENST00000349780 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP2-201ENST00000349780 BBXQ8WY36 941 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP2-201ENST00000349780 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
CDK5RAP2-201ENST00000349780 PRDM10Q9NQV6 1147 aa14.77□□□□□ -0.04
CDK5RAP2-201ENST00000349780 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
CDK5RAP2-201ENST00000349780 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
CDK5RAP2-201ENST00000349780 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
CDK5RAP2-201ENST00000349780 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
CDK5RAP2-201ENST00000349780 KNSTRNQ9Y448 316 aa14.76□□□□□ -0.05
CDK5RAP2-201ENST00000349780 TAF3Q5VWG9 929 aa14.76□□□□□ -0.05
CDK5RAP2-201ENST00000349780 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP2-201ENST00000349780 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP2-201ENST00000349780 TEX35Q5T0J7 233 aa14.75□□□□□ -0.05
CDK5RAP2-201ENST00000349780 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP2-201ENST00000349780 PHF14O94880 888 aa14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 UQCRHLA0A096LP55 91 aa14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 UQCRHP07919 91 aa14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 NASPP49321 788 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 ZHX1Q9UKY1 873 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP2-201ENST00000349780 ESPNB1AK53 854 aa14.73□□□□□ -0.05
CDK5RAP2-201ENST00000349780 CRBNQ96SW2 442 aa14.73□□□□□ -0.05
CDK5RAP2-201ENST00000349780 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP2-201ENST00000349780 TRAK2O60296 914 aa14.72□□□□□ -0.05
CDK5RAP2-201ENST00000349780 PLIN1O60240 522 aa14.72□□□□□ -0.05
CDK5RAP2-201ENST00000349780 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
CDK5RAP2-201ENST00000349780 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
CDK5RAP2-201ENST00000349780 CCDC173Q0VFZ6 552 aa14.71□□□□□ -0.05
CDK5RAP2-201ENST00000349780 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.05
CDK5RAP2-201ENST00000349780 NOM1Q5C9Z4 860 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP2-201ENST00000349780 NACADO15069 1562 aa14.71□□□□□ -0.05
CDK5RAP2-201ENST00000349780 CFAP44Q96MT7 982 aa14.71□□□□□ -0.06
CDK5RAP2-201ENST00000349780 CALRP27797 417 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP2-201ENST00000349780 CCDC39Q9UFE4 941 aa14.7□□□□□ -0.06
CDK5RAP2-201ENST00000349780 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
CDK5RAP2-201ENST00000349780 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
CDK5RAP2-201ENST00000349780 MCCP23508 829 aa14.69□□□□□ -0.06
CDK5RAP2-201ENST00000349780 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP2-201ENST00000349780 KTN1Q86UP2 1357 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP2-201ENST00000349780 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP2-201ENST00000349780 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
CDK5RAP2-201ENST00000349780 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
CDK5RAP2-201ENST00000349780 GRPEL1Q9HAV7 217 aa14.68□□□□□ -0.06
CDK5RAP2-201ENST00000349780 BACH2Q9BYV9 841 aa14.67□□□□□ -0.06
CDK5RAP2-201ENST00000349780 GPS2Q13227 327 aa14.67□□□□□ -0.06
CDK5RAP2-201ENST00000349780 AEBP1Q8IUX7 1158 aa14.67□□□□□ -0.06
CDK5RAP2-201ENST00000349780 DIAPH3Q9NSV4 1193 aa14.67□□□□□ -0.06
CDK5RAP2-201ENST00000349780 RALBP1Q15311 655 aa14.65□□□□□ -0.06
CDK5RAP2-201ENST00000349780 FOXD4L5Q5VV16 416 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP2-201ENST00000349780 FOXD4L4Q8WXT5 416 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP2-201ENST00000349780 PRKRIP1Q9H875 184 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
CDK5RAP2-201ENST00000349780 VPS8Q8N3P4 1428 aa14.64□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP2-201ENST00000349780 HMGN5P82970 282 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP2-201ENST00000349780 KIF16BQ96L93 1317 aa14.62□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CWC15Q9P013 229 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP2-201ENST00000349780 POGKQ9P215 609 aa14.62□□□□□ -0.07
CDK5RAP2-201ENST00000349780 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CBX1P83916 185 aa14.61□□□□□ -0.07
CDK5RAP2-201ENST00000349780 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP2-201ENST00000349780 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP2-201ENST00000349780 ISY1Q9ULR0 285 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP2-201ENST00000349780 GOLGA2Q08379 1002 aa14.58□□□□□ -0.07
CDK5RAP2-201ENST00000349780 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
CDK5RAP2-201ENST00000349780 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
CDK5RAP2-201ENST00000349780 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
CDK5RAP2-201ENST00000349780 NOC3LQ8WTT2 800 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP2-201ENST00000349780 TAF7LQ5H9L4 462 aa14.57□□□□□ -0.08
CDK5RAP2-201ENST00000349780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.084e-7■■■□□ 16.6
CDK5RAP2-201ENST00000349780 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP2-201ENST00000349780 ST18O60284 1047 aa14.56□□□□□ -0.08
CDK5RAP2-201ENST00000349780 ZSCAN30Q86W11 494 aa14.56□□□□□ -0.08
CDK5RAP2-201ENST00000349780 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP2-201ENST00000349780 CLCN1P35523 988 aa14.55□□□□□ -0.08
CDK5RAP2-201ENST00000349780 GNL2Q13823 731 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP2-201ENST00000349780 ERICH4A6NGS2 130 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms