RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 KDM2AQ9Y2K7 1162 aa14.57□□□□□ -0.08
UBE2D3-204ENST00000349311 TMEM92Q6UXU6 159 aa14.56□□□□□ -0.08
UBE2D3-204ENST00000349311 G3V3G9 751 aa14.53□□□□□ -0.08
UBE2D3-204ENST00000349311 MFSD10Q14728 455 aa14.52□□□□□ -0.09
UBE2D3-204ENST00000349311 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-204ENST00000349311 PDE4AP27815 886 aa14.5□□□□□ -0.09
UBE2D3-204ENST00000349311 LHX8Q68G74 356 aa14.49□□□□□ -0.09
UBE2D3-204ENST00000349311 MAMSTRQ6ZN01 415 aa14.47□□□□□ -0.09
UBE2D3-204ENST00000349311 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
UBE2D3-204ENST00000349311 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
UBE2D3-204ENST00000349311 C2orf72A6NCS6 295 aa14.45□□□□□ -0.1
UBE2D3-204ENST00000349311 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
UBE2D3-204ENST00000349311 FOXK1P85037 733 aa14.44□□□□□ -0.1
UBE2D3-204ENST00000349311 LARP6Q9BRS8 491 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-204ENST00000349311 SCUBE2Q9NQ36 999 aa14.41□□□□□ -0.1
UBE2D3-204ENST00000349311 TMC2Q8TDI7 906 aa14.4□□□□□ -0.1
UBE2D3-204ENST00000349311 DSG2Q14126 1118 aa14.39□□□□□ -0.11
UBE2D3-204ENST00000349311 DDX27Q96GQ7 796 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-204ENST00000349311 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
UBE2D3-204ENST00000349311 PPP1R15BQ5SWA1 713 aa14.35□□□□□ -0.11
UBE2D3-204ENST00000349311 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
UBE2D3-204ENST00000349311 PLPP6Q8IY26 295 aa14.31□□□□□ -0.12
UBE2D3-204ENST00000349311 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
UBE2D3-204ENST00000349311 SLC34A2O95436 690 aa14.27□□□□□ -0.13
UBE2D3-204ENST00000349311 E2F4Q16254 413 aa14.27□□□□□ -0.13
UBE2D3-204ENST00000349311 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-204ENST00000349311 HOXB3P14651 431 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-204ENST00000349311 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
UBE2D3-204ENST00000349311 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
UBE2D3-204ENST00000349311 PTCD2Q8WV60 388 aaKnown RBP14.21□□□□□ -0.13
UBE2D3-204ENST00000349311 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
UBE2D3-204ENST00000349311 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
UBE2D3-204ENST00000349311 ARHGEF1Q92888 912 aaKnown RBP14.17□□□□□ -0.14
UBE2D3-204ENST00000349311 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
UBE2D3-204ENST00000349311 KDM4FA0A1W2PPD8 638 aa14.12□□□□□ -0.15
UBE2D3-204ENST00000349311 SNPHO15079 494 aa14.11□□□□□ -0.15
UBE2D3-204ENST00000349311 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
UBE2D3-204ENST00000349311 GPR153Q6NV75 609 aa14.1□□□□□ -0.15
UBE2D3-204ENST00000349311 PCDHGA4Q9Y5G9 962 aa14.08□□□□□ -0.16
UBE2D3-204ENST00000349311 DPYSL4O14531 572 aa14.06□□□□□ -0.16
UBE2D3-204ENST00000349311 PDIA6Q15084 440 aa14.05□□□□□ -0.16
UBE2D3-204ENST00000349311 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBE2D3-204ENST00000349311 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-204ENST00000349311 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-204ENST00000349311 TBC1D12O60347 775 aa14.02□□□□□ -0.17
UBE2D3-204ENST00000349311 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
UBE2D3-204ENST00000349311 RIMBP2O15034 1052 aa14.01□□□□□ -0.17
UBE2D3-204ENST00000349311 HOXB1P14653 301 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-204ENST00000349311 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
UBE2D3-204ENST00000349311 LCE2DQ5TA82 110 aaPredicted RBP13.99□□□□□ -0.17
UBE2D3-204ENST00000349311 PTGER2P43116 358 aa13.98□□□□□ -0.17
UBE2D3-204ENST00000349311 ST18O60284 1047 aa13.97□□□□□ -0.17
UBE2D3-204ENST00000349311 EVI5O60447 810 aa13.97□□□□□ -0.17
UBE2D3-204ENST00000349311 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
UBE2D3-204ENST00000349311 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.173e-7■■■□□ 18.3
UBE2D3-204ENST00000349311 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-204ENST00000349311 SEMA3EO15041 775 aa13.92□□□□□ -0.18
UBE2D3-204ENST00000349311 NUDT7P0C024 238 aa13.92□□□□□ -0.18
UBE2D3-204ENST00000349311 BCANQ96GW7 911 aa13.91□□□□□ -0.18
UBE2D3-204ENST00000349311 NBR1Q14596 966 aa13.86□□□□□ -0.19
UBE2D3-204ENST00000349311 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-204ENST00000349311 MLLT3P42568 568 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-204ENST00000349311 LHX6Q9UPM6 363 aa13.85□□□□□ -0.19
UBE2D3-204ENST00000349311 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-204ENST00000349311 FOSBP53539 338 aa13.82□□□□□ -0.2
UBE2D3-204ENST00000349311 PHF14O94880 888 aa13.81□□□□□ -0.2
UBE2D3-204ENST00000349311 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
UBE2D3-204ENST00000349311 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
UBE2D3-204ENST00000349311 OSBPP22059 807 aa13.8□□□□□ -0.2
UBE2D3-204ENST00000349311 PCDHGA10Q9Y5H3 936 aa13.8□□□□□ -0.2
UBE2D3-204ENST00000349311 DDX12PQ92771 950 aa13.78□□□□□ -0.2
UBE2D3-204ENST00000349311 PSDA5PKW4 1024 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-204ENST00000349311 EPAS1Q99814 870 aa13.77□□□□□ -0.21
UBE2D3-204ENST00000349311 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-204ENST00000349311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE2D3-204ENST00000349311 MARVELD3Q96A59 401 aa13.76□□□□□ -0.21
UBE2D3-204ENST00000349311 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
UBE2D3-204ENST00000349311 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
UBE2D3-204ENST00000349311 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
UBE2D3-204ENST00000349311 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
UBE2D3-204ENST00000349311 EMP3P54852 163 aa13.73□□□□□ -0.21
UBE2D3-204ENST00000349311 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
UBE2D3-204ENST00000349311 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
UBE2D3-204ENST00000349311 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
UBE2D3-204ENST00000349311 EN1Q05925 392 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-204ENST00000349311 ZDHHC16Q969W1 377 aa13.7□□□□□ -0.22
UBE2D3-204ENST00000349311 ERBB3P21860 1342 aa13.69□□□□□ -0.22
UBE2D3-204ENST00000349311 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
UBE2D3-204ENST00000349311 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-204ENST00000349311 HS3ST6Q96QI5 342 aa13.67□□□□□ -0.22
UBE2D3-204ENST00000349311 ADAM33Q9BZ11 813 aa13.67□□□□□ -0.22
UBE2D3-204ENST00000349311 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
UBE2D3-204ENST00000349311 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
UBE2D3-204ENST00000349311 RBM26Q5T8P6 1007 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-204ENST00000349311 ZNF687Q8N1G0 1237 aa13.66□□□□□ -0.22
UBE2D3-204ENST00000349311 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
UBE2D3-204ENST00000349311 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
UBE2D3-204ENST00000349311 C6orf132Q5T0Z8 1188 aa13.62□□□□□ -0.23
UBE2D3-204ENST00000349311 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-204ENST00000349311 GPR37O15354 613 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms