RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 PHLDB1Q86UU1 1377 aa36.65■■■■□ 3.46
MADCAM1-202ENST00000346144 ARHGAP5Q13017 1502 aa36.65■■■■□ 3.46
MADCAM1-202ENST00000346144 GPATCH8Q9UKJ3 1502 aaKnown RBP36.65■■■■□ 3.46
MADCAM1-202ENST00000346144 ITSN2Q9NZM3 1697 aa36.64■■■■□ 3.46
MADCAM1-202ENST00000346144 CCNB3Q8WWL7 1395 aa36.64■■■■□ 3.46
MADCAM1-202ENST00000346144 EFCAB2Q5VUJ9 269 aa36.59■■■■□ 3.45
MADCAM1-202ENST00000346144 AKNAQ7Z591 1439 aa36.57■■■■□ 3.45
MADCAM1-202ENST00000346144 COL17A1Q9UMD9 1497 aaPredicted RBP36.54■■■■□ 3.44
MADCAM1-202ENST00000346144 ADGRL1O94910 1474 aa36.49■■■■□ 3.43
MADCAM1-202ENST00000346144 CFDP1Q9UEE9 299 aaPredicted RBP36.49■■■■□ 3.43
MADCAM1-202ENST00000346144 SAMD9LQ8IVG5 1584 aa36.46■■■■□ 3.43
MADCAM1-202ENST00000346144 ABCC1P33527 1531 aa36.44■■■■□ 3.42
MADCAM1-202ENST00000346144 MYOM3Q5VTT5 1437 aa36.44■■■■□ 3.42
MADCAM1-202ENST00000346144 DENND4BO75064 1496 aaPredicted RBP36.42■■■■□ 3.42
MADCAM1-202ENST00000346144 SCAPERQ9BY12 1400 aa36.42■■■■□ 3.42
MADCAM1-202ENST00000346144 RICTORQ6R327 1708 aa36.42■■■■□ 3.42
MADCAM1-202ENST00000346144 FRMPD1Q5SYB0 1578 aa36.4■■■■□ 3.42
MADCAM1-202ENST00000346144 ZNF777Q9ULD5 760 aaPredicted RBP36.39■■■■□ 3.42
MADCAM1-202ENST00000346144 PLEKHH2Q8IVE3 1493 aa36.37■■■■□ 3.41
MADCAM1-202ENST00000346144 MIA2Q96PC5 1412 aa36.37■■■■□ 3.41
MADCAM1-202ENST00000346144 POGZQ7Z3K3 1410 aa36.35■■■■□ 3.41
MADCAM1-202ENST00000346144 ARHGEF12Q9NZN5 1544 aa36.34■■■■□ 3.41
MADCAM1-202ENST00000346144 RAPGEF3O95398 923 aa36.34■■■■□ 3.41
MADCAM1-202ENST00000346144 KIAA1107Q9UPP5 1409 aa36.33■■■■□ 3.41
MADCAM1-202ENST00000346144 SYCP2Q9BX26 1530 aa36.33■■■■□ 3.41
MADCAM1-202ENST00000346144 PPARGC1BQ86YN6 1023 aaKnown RBP36.33■■■■□ 3.41
MADCAM1-202ENST00000346144 CAMSAP2Q08AD1 1489 aa36.32■■■■□ 3.4
MADCAM1-202ENST00000346144 ZNF644Q9H582 1327 aaPredicted RBP36.3■■■■□ 3.4
MADCAM1-202ENST00000346144 ZNF518AQ6AHZ1 1483 aa36.29■■■■□ 3.4
MADCAM1-202ENST00000346144 ZMYM4Q5VZL5 1548 aa36.28■■■■□ 3.4
MADCAM1-202ENST00000346144 FGD6Q6ZV73 1430 aa36.27■■■■□ 3.4
MADCAM1-202ENST00000346144 KDM5CP41229 1560 aa36.25■■■■□ 3.39
MADCAM1-202ENST00000346144 PTPN23Q9H3S7 1636 aa36.25■■■■□ 3.39
MADCAM1-202ENST00000346144 TRAPPC8Q9Y2L5 1435 aa36.25■■■■□ 3.39
MADCAM1-202ENST00000346144 HNRNPMP52272 730 aaKnown RBP eCLIP36.22■■■■□ 3.39
MADCAM1-202ENST00000346144 MBD5Q9P267 1494 aa36.22■■■■□ 3.39
MADCAM1-202ENST00000346144 AEBP2Q6ZN18 517 aaPredicted RBP36.21■■■■□ 3.39
MADCAM1-202ENST00000346144 TCOF1Q13428 1488 aaKnown RBP36.19■■■■□ 3.38
MADCAM1-202ENST00000346144 AFAP1Q8N556 730 aa36.19■■■■□ 3.38
MADCAM1-202ENST00000346144 ARHGEF5Q12774 1597 aa36.18■■■■□ 3.38
MADCAM1-202ENST00000346144 MAGI2Q86UL8 1455 aa36.17■■■■□ 3.38
MADCAM1-202ENST00000346144 HECW2Q9P2P5 1572 aa36.16■■■■□ 3.38
MADCAM1-202ENST00000346144 CCDC141Q6ZP82 1450 aa36.12■■■■□ 3.37
MADCAM1-202ENST00000346144 ARHGEF40Q8TER5 1519 aa36.12■■■■□ 3.37
MADCAM1-202ENST00000346144 MLH3Q9UHC1 1453 aa36.12■■■■□ 3.37
MADCAM1-202ENST00000346144 ZFYVE16Q7Z3T8 1539 aa36.11■■■■□ 3.37
MADCAM1-202ENST00000346144 RSPH4AQ5TD94 716 aa36.1■■■■□ 3.37
MADCAM1-202ENST00000346144 KIDINS220Q9ULH0 1771 aa36.07■■■■□ 3.37
MADCAM1-202ENST00000346144 INO80Q9ULG1 1556 aaPredicted RBP36.07■■■■□ 3.36
MADCAM1-202ENST00000346144 YEATS2Q9ULM3 1422 aa36.06■■■■□ 3.36
MADCAM1-202ENST00000346144 SPAG9O60271 1321 aaKnown RBP36.04■■■■□ 3.36
MADCAM1-202ENST00000346144 DNMT1P26358 1616 aaKnown RBP36.03■■■■□ 3.36
MADCAM1-202ENST00000346144 ATP7AQ04656 1500 aa36.03■■■■□ 3.36
MADCAM1-202ENST00000346144 CROCC2H7BZ55 1655 aa36.02■■■■□ 3.36
MADCAM1-202ENST00000346144 ABCA6Q8N139 1617 aa36.01■■■■□ 3.35
MADCAM1-202ENST00000346144 DIP2CQ9Y2E4 1556 aa36■■■■□ 3.35
MADCAM1-202ENST00000346144 FAM50AQ14320 339 aaKnown RBP35.99■■■■□ 3.35
MADCAM1-202ENST00000346144 RRBP1Q9P2E9 1410 aaKnown RBP35.99■■■■□ 3.35
MADCAM1-202ENST00000346144 MYT1LQ9UL68 1186 aa35.99■■■■□ 3.35
MADCAM1-202ENST00000346144 MAST1Q9Y2H9 1570 aa35.98■■■■□ 3.35
MADCAM1-202ENST00000346144 RTEL1-TNFRSF6BF6WH68 1400 aa35.98■■■■□ 3.35
MADCAM1-202ENST00000346144 ABCC5O15440 1437 aa35.96■■■■□ 3.35
MADCAM1-202ENST00000346144 DAPK1P53355 1430 aa35.96■■■■□ 3.35
MADCAM1-202ENST00000346144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.96■■■■□ 3.35
MADCAM1-202ENST00000346144 ATP10AO60312 1499 aa35.95■■■■□ 3.35
MADCAM1-202ENST00000346144 TSPY4P0CV99 314 aa35.94■■■■□ 3.34
MADCAM1-202ENST00000346144 TSPY10P0CW01 314 aa35.94■■■■□ 3.34
MADCAM1-202ENST00000346144 SHANK2Q9UPX8 1470 aa35.93■■■■□ 3.34
MADCAM1-202ENST00000346144 C9orf84Q5VXU9 1444 aa35.91■■■■□ 3.34
MADCAM1-202ENST00000346144 REREQ9P2R6 1566 aa35.9■■■■□ 3.34
MADCAM1-202ENST00000346144 ADGBQ8N7X0 1667 aa35.88■■■■□ 3.33
MADCAM1-202ENST00000346144 SIGLEC1Q9BZZ2 1709 aa35.87■■■■□ 3.33
MADCAM1-202ENST00000346144 PLXNC1O60486 1568 aa35.85■■■■□ 3.33
MADCAM1-202ENST00000346144 KDM4FA0A1W2PPD8 638 aa35.84■■■■□ 3.33
MADCAM1-202ENST00000346144 A2MP01023 1474 aa35.79■■■■□ 3.32
MADCAM1-202ENST00000346144 AGLP35573 1532 aa35.76■■■■□ 3.32
MADCAM1-202ENST00000346144 ADGRL2O95490 1459 aa35.75■■■■□ 3.31
MADCAM1-202ENST00000346144 PTPRKQ15262 1439 aa35.74■■■■□ 3.31
MADCAM1-202ENST00000346144 ARID4BQ4LE39 1312 aaPredicted RBP35.73■■■■□ 3.31
MADCAM1-202ENST00000346144 BCORL1Q5H9F3 1711 aa35.72■■■■□ 3.31
MADCAM1-202ENST00000346144 CHIC2Q9UKJ5 165 aa35.71■■■■□ 3.31
MADCAM1-202ENST00000346144 DHX29Q7Z478 1369 aaKnown RBP35.71■■■■□ 3.31
MADCAM1-202ENST00000346144 ANKRD30AQ9BXX3 1397 aa35.71■■■■□ 3.31
MADCAM1-202ENST00000346144 NCOA1Q15788 1441 aa35.69■■■■□ 3.3
MADCAM1-202ENST00000346144 DUOX2Q9NRD8 1548 aa35.68■■■■□ 3.3
MADCAM1-202ENST00000346144 KIF15Q9NS87 1388 aa35.67■■■■□ 3.3
MADCAM1-202ENST00000346144 ITGAEP38570 1179 aa35.67■■■■□ 3.3
MADCAM1-202ENST00000346144 ROCK1Q13464 1354 aa35.64■■■■□ 3.3
MADCAM1-202ENST00000346144 RRP7BPQ9NSQ0 103 aa35.63■■■■□ 3.29
MADCAM1-202ENST00000346144 ADAMTSL3P82987 1691 aa35.62■■■■□ 3.29
MADCAM1-202ENST00000346144 EIF2AK4Q9P2K8 1649 aaKnown RBP35.61■■■■□ 3.29
MADCAM1-202ENST00000346144 ERBINQ96RT1 1412 aa35.58■■■■□ 3.29
MADCAM1-202ENST00000346144 MLECQ14165 292 aa35.55■■■■□ 3.28
MADCAM1-202ENST00000346144 MADDQ8WXG6 1647 aa35.53■■■■□ 3.28
MADCAM1-202ENST00000346144 FER1L4A9Z1Z3 1794 aa35.52■■■■□ 3.28
MADCAM1-202ENST00000346144 RNF17Q9BXT8 1623 aaKnown RBP35.51■■■■□ 3.27
MADCAM1-202ENST00000346144 KIF3BO15066 747 aa35.51■■■■□ 3.27
MADCAM1-202ENST00000346144 ANKRD50Q9ULJ7 1429 aa35.47■■■■□ 3.27
MADCAM1-202ENST00000346144 GCC2Q8IWJ2 1684 aa35.45■■■■□ 3.27
MADCAM1-202ENST00000346144 RIMS1Q86UR5 1692 aaKnown RBP35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms