RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ADAMTSL3P82987 1691 aa27.75■■■□□ 2.03
BRCC3-202ENST00000340647 ARHGEF40Q8TER5 1519 aa27.74■■■□□ 2.03
BRCC3-202ENST00000340647 SCAPERQ9BY12 1400 aa27.71■■■□□ 2.03
BRCC3-202ENST00000340647 BCORL1Q5H9F3 1711 aa27.7■■■□□ 2.02
BRCC3-202ENST00000340647 YEATS2Q9ULM3 1422 aa27.69■■■□□ 2.02
BRCC3-202ENST00000340647 POGZQ7Z3K3 1410 aa27.68■■■□□ 2.02
BRCC3-202ENST00000340647 CDC42BPAQ5VT25 1732 aa27.68■■■□□ 2.02
BRCC3-202ENST00000340647 PREX2Q70Z35 1606 aa27.67■■■□□ 2.02
BRCC3-202ENST00000340647 EFCAB2Q5VUJ9 269 aa27.66■■■□□ 2.02
BRCC3-202ENST00000340647 ARHGAP5Q13017 1502 aa27.65■■■□□ 2.02
BRCC3-202ENST00000340647 CEP162Q5TB80 1403 aa27.65■■■□□ 2.02
BRCC3-202ENST00000340647 ZFYVE16Q7Z3T8 1539 aa27.63■■■□□ 2.01
BRCC3-202ENST00000340647 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
BRCC3-202ENST00000340647 MAGI2Q86UL8 1455 aa27.61■■■□□ 2.01
BRCC3-202ENST00000340647 ARHGEF12Q9NZN5 1544 aa27.6■■■□□ 2.01
BRCC3-202ENST00000340647 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
BRCC3-202ENST00000340647 KDM5CP41229 1560 aa27.59■■■□□ 2.01
BRCC3-202ENST00000340647 PTPRMP28827 1452 aa27.56■■■□□ 2
BRCC3-202ENST00000340647 ABCC1P33527 1531 aa27.56■■■□□ 2
BRCC3-202ENST00000340647 ITSN2Q9NZM3 1697 aa27.55■■■□□ 2
BRCC3-202ENST00000340647 AFAP1Q8N556 730 aa27.54■■■□□ 2
BRCC3-202ENST00000340647 GPATCH8Q9UKJ3 1502 aaKnown RBP27.53■■■□□ 2
BRCC3-202ENST00000340647 ZNF518AQ6AHZ1 1483 aa27.52■■■□□ 2
BRCC3-202ENST00000340647 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
BRCC3-202ENST00000340647 ARID4BQ4LE39 1312 aaPredicted RBP27.5■■□□□ 1.99
BRCC3-202ENST00000340647 SAMD9LQ8IVG5 1584 aa27.5■■□□□ 1.99
BRCC3-202ENST00000340647 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
BRCC3-202ENST00000340647 ATP10AO60312 1499 aa27.49■■□□□ 1.99
BRCC3-202ENST00000340647 DIP2CQ9Y2E4 1556 aa27.46■■□□□ 1.99
BRCC3-202ENST00000340647 ABCA6Q8N139 1617 aa27.45■■□□□ 1.99
BRCC3-202ENST00000340647 KIDINS220Q9ULH0 1771 aa27.44■■□□□ 1.98
BRCC3-202ENST00000340647 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
BRCC3-202ENST00000340647 C9orf84Q5VXU9 1444 aa27.43■■□□□ 1.98
BRCC3-202ENST00000340647 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
BRCC3-202ENST00000340647 EHBP1L1Q8N3D4 1523 aa27.41■■□□□ 1.98
BRCC3-202ENST00000340647 MTUS2Q5JR59 1369 aa27.4■■□□□ 1.98
BRCC3-202ENST00000340647 FER1L4A9Z1Z3 1794 aa27.4■■□□□ 1.98
BRCC3-202ENST00000340647 SYCP2Q9BX26 1530 aa27.39■■□□□ 1.98
BRCC3-202ENST00000340647 REREQ9P2R6 1566 aa27.39■■□□□ 1.97
BRCC3-202ENST00000340647 MLECQ14165 292 aa27.35■■□□□ 1.97
BRCC3-202ENST00000340647 FBXO41Q8TF61 875 aa27.35■■□□□ 1.97
BRCC3-202ENST00000340647 LMTK3Q96Q04 1460 aa27.35■■□□□ 1.97
BRCC3-202ENST00000340647 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
BRCC3-202ENST00000340647 ZNF777Q9ULD5 760 aaPredicted RBP27.34■■□□□ 1.97
BRCC3-202ENST00000340647 CCNB3Q8WWL7 1395 aa27.34■■□□□ 1.97
BRCC3-202ENST00000340647 HNRNPMP52272 730 aaKnown RBP eCLIP27.33■■□□□ 1.97
BRCC3-202ENST00000340647 KIAA1107Q9UPP5 1409 aa27.32■■□□□ 1.96
BRCC3-202ENST00000340647 CFDP1Q9UEE9 299 aaPredicted RBP27.31■■□□□ 1.96
BRCC3-202ENST00000340647 ZNF644Q9H582 1327 aaPredicted RBP27.3■■□□□ 1.96
BRCC3-202ENST00000340647 AGLP35573 1532 aa27.28■■□□□ 1.96
BRCC3-202ENST00000340647 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
BRCC3-202ENST00000340647 INO80Q9ULG1 1556 aaPredicted RBP27.27■■□□□ 1.96
BRCC3-202ENST00000340647 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
BRCC3-202ENST00000340647 MBD5Q9P267 1494 aa27.26■■□□□ 1.95
BRCC3-202ENST00000340647 PLEKHH2Q8IVE3 1493 aa27.25■■□□□ 1.95
BRCC3-202ENST00000340647 MYT1LQ9UL68 1186 aa27.23■■□□□ 1.95
BRCC3-202ENST00000340647 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
BRCC3-202ENST00000340647 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
BRCC3-202ENST00000340647 SPAG9O60271 1321 aaKnown RBP27.19■■□□□ 1.94
BRCC3-202ENST00000340647 HSPA2P54652 639 aa27.19■■□□□ 1.94
BRCC3-202ENST00000340647 KANK4Q5T7N3 995 aaPredicted RBP27.19■■□□□ 1.94
BRCC3-202ENST00000340647 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
BRCC3-202ENST00000340647 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
BRCC3-202ENST00000340647 PLXNC1O60486 1568 aa27.18■■□□□ 1.94
BRCC3-202ENST00000340647 CEBPAP49715 358 aaPredicted RBP27.17■■□□□ 1.94
BRCC3-202ENST00000340647 C3P01024 1663 aa27.16■■□□□ 1.94
BRCC3-202ENST00000340647 CAMSAP2Q08AD1 1489 aa27.13■■□□□ 1.93
BRCC3-202ENST00000340647 ADGBQ8N7X0 1667 aa27.11■■□□□ 1.93
BRCC3-202ENST00000340647 A2MP01023 1474 aa27.1■■□□□ 1.93
BRCC3-202ENST00000340647 PREX1Q8TCU6 1659 aa27.1■■□□□ 1.93
BRCC3-202ENST00000340647 SETD1BQ9UPS6 1966 aaKnown RBP27.09■■□□□ 1.93
BRCC3-202ENST00000340647 RTEL1-TNFRSF6BF6WH68 1400 aa27.07■■□□□ 1.92
BRCC3-202ENST00000340647 ARHGEF5Q12774 1597 aa27.05■■□□□ 1.92
BRCC3-202ENST00000340647 CCDC141Q6ZP82 1450 aa27.04■■□□□ 1.92
BRCC3-202ENST00000340647 MROH2AA6NES4 1674 aa27.03■■□□□ 1.92
BRCC3-202ENST00000340647 CLTCQ00610 1675 aaKnown RBP27.01■■□□□ 1.91
BRCC3-202ENST00000340647 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
BRCC3-202ENST00000340647 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
BRCC3-202ENST00000340647 STRCQ7RTU9 1775 aa26.97■■□□□ 1.91
BRCC3-202ENST00000340647 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
BRCC3-202ENST00000340647 MIA2Q96PC5 1412 aa26.94■■□□□ 1.9
BRCC3-202ENST00000340647 RSPH4AQ5TD94 716 aa26.94■■□□□ 1.9
BRCC3-202ENST00000340647 CERKQ8TCT0 537 aa26.94■■□□□ 1.9
BRCC3-202ENST00000340647 ZMYM3Q14202 1370 aa26.94■■□□□ 1.9
BRCC3-202ENST00000340647 MAST1Q9Y2H9 1570 aa26.92■■□□□ 1.9
BRCC3-202ENST00000340647 GGT6Q6P531 493 aa26.9■■□□□ 1.9
BRCC3-202ENST00000340647 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
BRCC3-202ENST00000340647 ESF1Q9H501 851 aaKnown RBP26.89■■□□□ 1.9
BRCC3-202ENST00000340647 NPATQ14207 1427 aa26.86■■□□□ 1.89
BRCC3-202ENST00000340647 PTPRKQ15262 1439 aa26.85■■□□□ 1.89
BRCC3-202ENST00000340647 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
BRCC3-202ENST00000340647 PPP6R1Q9UPN7 881 aa26.83■■□□□ 1.89
BRCC3-202ENST00000340647 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
BRCC3-202ENST00000340647 KIF3BO15066 747 aa26.82■■□□□ 1.88
BRCC3-202ENST00000340647 TSPY4P0CV99 314 aa26.81■■□□□ 1.88
BRCC3-202ENST00000340647 TSPY10P0CW01 314 aa26.81■■□□□ 1.88
BRCC3-202ENST00000340647 ABCC5O15440 1437 aa26.8■■□□□ 1.88
BRCC3-202ENST00000340647 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
BRCC3-202ENST00000340647 TCOF1Q13428 1488 aaKnown RBP26.79■■□□□ 1.88
BRCC3-202ENST00000340647 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms