RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 FGD6Q6ZV73 1430 aa27.5■■□□□ 1.99
SDCBP2-201ENST00000339987 ARHGAP5Q13017 1502 aa27.49■■□□□ 1.99
SDCBP2-201ENST00000339987 CFDP1Q9UEE9 299 aaPredicted RBP27.49■■□□□ 1.99
SDCBP2-201ENST00000339987 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.99
SDCBP2-201ENST00000339987 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.99
SDCBP2-201ENST00000339987 EFCAB2Q5VUJ9 269 aa27.45■■□□□ 1.98
SDCBP2-201ENST00000339987 CFAP74Q9C0B2 1584 aa27.44■■□□□ 1.98
SDCBP2-201ENST00000339987 FANCAO15360 1455 aa27.44■■□□□ 1.98
SDCBP2-201ENST00000339987 TCOF1Q13428 1488 aaKnown RBP27.43■■□□□ 1.98
SDCBP2-201ENST00000339987 TEX14Q8IWB6 1497 aa27.43■■□□□ 1.98
SDCBP2-201ENST00000339987 PTPN23Q9H3S7 1636 aa27.42■■□□□ 1.98
SDCBP2-201ENST00000339987 NEO1Q92859 1461 aa27.41■■□□□ 1.98
SDCBP2-201ENST00000339987 TSPOAP1O95153 1857 aa27.41■■□□□ 1.98
SDCBP2-201ENST00000339987 SAMD9LQ8IVG5 1584 aa27.4■■□□□ 1.98
SDCBP2-201ENST00000339987 CAMSAP2Q08AD1 1489 aa27.39■■□□□ 1.97
SDCBP2-201ENST00000339987 PLEKHH2Q8IVE3 1493 aa27.37■■□□□ 1.97
SDCBP2-201ENST00000339987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.37■■□□□ 1.97
SDCBP2-201ENST00000339987 ZNF777Q9ULD5 760 aaPredicted RBP27.36■■□□□ 1.97
SDCBP2-201ENST00000339987 AKNAQ7Z591 1439 aa27.35■■□□□ 1.97
SDCBP2-201ENST00000339987 ZNF644Q9H582 1327 aaPredicted RBP27.34■■□□□ 1.97
SDCBP2-201ENST00000339987 ABCC1P33527 1531 aa27.34■■□□□ 1.97
SDCBP2-201ENST00000339987 KIAA1107Q9UPP5 1409 aa27.34■■□□□ 1.97
SDCBP2-201ENST00000339987 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
SDCBP2-201ENST00000339987 FAM50AQ14320 339 aaKnown RBP27.3■■□□□ 1.96
SDCBP2-201ENST00000339987 SYCP2Q9BX26 1530 aa27.28■■□□□ 1.96
SDCBP2-201ENST00000339987 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
SDCBP2-201ENST00000339987 ARHGEF5Q12774 1597 aa27.27■■□□□ 1.96
SDCBP2-201ENST00000339987 ARHGEF12Q9NZN5 1544 aa27.27■■□□□ 1.96
SDCBP2-201ENST00000339987 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
SDCBP2-201ENST00000339987 DNMT1P26358 1616 aaKnown RBP27.23■■□□□ 1.95
SDCBP2-201ENST00000339987 HNRNPMP52272 730 aaKnown RBP eCLIP27.23■■□□□ 1.95
SDCBP2-201ENST00000339987 RSPH4AQ5TD94 716 aa27.23■■□□□ 1.95
SDCBP2-201ENST00000339987 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
SDCBP2-201ENST00000339987 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
SDCBP2-201ENST00000339987 CCDC141Q6ZP82 1450 aa27.21■■□□□ 1.95
SDCBP2-201ENST00000339987 DAPK1P53355 1430 aa27.19■■□□□ 1.94
SDCBP2-201ENST00000339987 POGZQ7Z3K3 1410 aa27.19■■□□□ 1.94
SDCBP2-201ENST00000339987 ABCC5O15440 1437 aa27.19■■□□□ 1.94
SDCBP2-201ENST00000339987 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
SDCBP2-201ENST00000339987 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
SDCBP2-201ENST00000339987 CROCC2H7BZ55 1655 aa27.16■■□□□ 1.94
SDCBP2-201ENST00000339987 SHANK2Q9UPX8 1470 aa27.15■■□□□ 1.94
SDCBP2-201ENST00000339987 RICTORQ6R327 1708 aa27.15■■□□□ 1.94
SDCBP2-201ENST00000339987 KDM5CP41229 1560 aa27.14■■□□□ 1.94
SDCBP2-201ENST00000339987 COL17A1Q9UMD9 1497 aaPredicted RBP27.13■■□□□ 1.93
SDCBP2-201ENST00000339987 FRMPD1Q5SYB0 1578 aa27.13■■□□□ 1.93
SDCBP2-201ENST00000339987 MAST1Q9Y2H9 1570 aa27.12■■□□□ 1.93
SDCBP2-201ENST00000339987 AFAP1Q8N556 730 aa27.11■■□□□ 1.93
SDCBP2-201ENST00000339987 PTPRKQ15262 1439 aa27.11■■□□□ 1.93
SDCBP2-201ENST00000339987 RAPGEF3O95398 923 aa27.09■■□□□ 1.93
SDCBP2-201ENST00000339987 TSPY4P0CV99 314 aa27.09■■□□□ 1.93
SDCBP2-201ENST00000339987 TSPY10P0CW01 314 aa27.09■■□□□ 1.93
SDCBP2-201ENST00000339987 KDM6BO15054 1643 aa27.09■■□□□ 1.93
SDCBP2-201ENST00000339987 ITGAEP38570 1179 aa27.08■■□□□ 1.93
SDCBP2-201ENST00000339987 C9orf84Q5VXU9 1444 aa27.08■■□□□ 1.93
SDCBP2-201ENST00000339987 ZMYM4Q5VZL5 1548 aa27.08■■□□□ 1.93
SDCBP2-201ENST00000339987 RTEL1-TNFRSF6BF6WH68 1400 aa27.07■■□□□ 1.92
SDCBP2-201ENST00000339987 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
SDCBP2-201ENST00000339987 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
SDCBP2-201ENST00000339987 ADGRL2O95490 1459 aa27.05■■□□□ 1.92
SDCBP2-201ENST00000339987 MLH3Q9UHC1 1453 aa27.05■■□□□ 1.92
SDCBP2-201ENST00000339987 HECW2Q9P2P5 1572 aa27.05■■□□□ 1.92
SDCBP2-201ENST00000339987 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
SDCBP2-201ENST00000339987 ADGBQ8N7X0 1667 aa27.04■■□□□ 1.92
SDCBP2-201ENST00000339987 ROCK1Q13464 1354 aa27.03■■□□□ 1.92
SDCBP2-201ENST00000339987 ATP7AQ04656 1500 aa27.03■■□□□ 1.92
SDCBP2-201ENST00000339987 MAGI2Q86UL8 1455 aa27.02■■□□□ 1.92
SDCBP2-201ENST00000339987 PLXNC1O60486 1568 aa27■■□□□ 1.91
SDCBP2-201ENST00000339987 KIDINS220Q9ULH0 1771 aa27■■□□□ 1.91
SDCBP2-201ENST00000339987 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
SDCBP2-201ENST00000339987 CHIC2Q9UKJ5 165 aa26.99■■□□□ 1.91
SDCBP2-201ENST00000339987 ANKRD30AQ9BXX3 1397 aa26.99■■□□□ 1.91
SDCBP2-201ENST00000339987 NCOA1Q15788 1441 aa26.99■■□□□ 1.91
SDCBP2-201ENST00000339987 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
SDCBP2-201ENST00000339987 MYT1LQ9UL68 1186 aa26.92■■□□□ 1.9
SDCBP2-201ENST00000339987 ABCA6Q8N139 1617 aa26.92■■□□□ 1.9
SDCBP2-201ENST00000339987 KIF15Q9NS87 1388 aa26.91■■□□□ 1.9
SDCBP2-201ENST00000339987 DIP2CQ9Y2E4 1556 aa26.91■■□□□ 1.9
SDCBP2-201ENST00000339987 YEATS2Q9ULM3 1422 aa26.91■■□□□ 1.9
SDCBP2-201ENST00000339987 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
SDCBP2-201ENST00000339987 ARHGEF40Q8TER5 1519 aa26.9■■□□□ 1.9
SDCBP2-201ENST00000339987 RRP7BPQ9NSQ0 103 aa26.9■■□□□ 1.9
SDCBP2-201ENST00000339987 GCC2Q8IWJ2 1684 aa26.89■■□□□ 1.89
SDCBP2-201ENST00000339987 NAIPQ13075 1403 aa26.88■■□□□ 1.89
SDCBP2-201ENST00000339987 DUOX2Q9NRD8 1548 aa26.88■■□□□ 1.89
SDCBP2-201ENST00000339987 ATP10AO60312 1499 aa26.85■■□□□ 1.89
SDCBP2-201ENST00000339987 A2MP01023 1474 aa26.84■■□□□ 1.89
SDCBP2-201ENST00000339987 REREQ9P2R6 1566 aa26.84■■□□□ 1.89
SDCBP2-201ENST00000339987 DHX29Q7Z478 1369 aaKnown RBP26.83■■□□□ 1.89
SDCBP2-201ENST00000339987 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
SDCBP2-201ENST00000339987 ERBINQ96RT1 1412 aa26.82■■□□□ 1.88
SDCBP2-201ENST00000339987 ANKRD50Q9ULJ7 1429 aa26.81■■□□□ 1.88
SDCBP2-201ENST00000339987 EIF2AK4Q9P2K8 1649 aaKnown RBP26.77■■□□□ 1.88
SDCBP2-201ENST00000339987 AGLP35573 1532 aa26.74■■□□□ 1.87
SDCBP2-201ENST00000339987 BCORL1Q5H9F3 1711 aa26.74■■□□□ 1.87
SDCBP2-201ENST00000339987 RAB3GAP2Q9H2M9 1393 aa26.73■■□□□ 1.87
SDCBP2-201ENST00000339987 HRCP23327 699 aa26.72■■□□□ 1.87
SDCBP2-201ENST00000339987 ACIN1Q9UKV3 1341 aaKnown RBP26.69■■□□□ 1.86
SDCBP2-201ENST00000339987 SIGLEC1Q9BZZ2 1709 aa26.68■■□□□ 1.86
SDCBP2-201ENST00000339987 RNF17Q9BXT8 1623 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms