RNA–Protein interactions for RNA: ENST00000335670.10

RORA-203, Transcript of RAR related orphan receptor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RORA, Length 10,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-203ENST00000335670 AEBP2Q6ZN18 517 aaPredicted RBP8.54□□□□□ -1.04
RORA-203ENST00000335670 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
RORA-203ENST00000335670 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
RORA-203ENST00000335670 TPM2P07951 284 aa8.54□□□□□ -1.04
RORA-203ENST00000335670 CALD1Q05682 793 aaKnown RBP8.54□□□□□ -1.04
RORA-203ENST00000335670 ZRSR2Q15696 482 aaKnown RBP8.54□□□□□ -1.04
RORA-203ENST00000335670 NAP1L2Q9ULW6 460 aaPredicted RBP8.53□□□□□ -1.04
RORA-203ENST00000335670 NEXNQ0ZGT2 675 aa8.53□□□□□ -1.04
RORA-203ENST00000335670 DCTN1Q14203 1278 aa8.52□□□□□ -1.04
RORA-203ENST00000335670 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 IPO9Q96P70 1041 aaKnown RBP8.52□□□□□ -1.05
RORA-203ENST00000335670 TPM1P09493 284 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 TEX35Q5T0J7 233 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 KIF3AQ9Y496 699 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.05
RORA-203ENST00000335670 RTN4Q9NQC3 1192 aaKnown RBP8.51□□□□□ -1.05
RORA-203ENST00000335670 KIAA1211Q6ZU35 1233 aa8.51□□□□□ -1.05
RORA-203ENST00000335670 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
RORA-203ENST00000335670 HDAC5Q9UQL6 1122 aa8.51□□□□□ -1.05
RORA-203ENST00000335670 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
RORA-203ENST00000335670 MAPK8IP3Q9UPT6 1336 aa8.5□□□□□ -1.05
RORA-203ENST00000335670 CHMP7Q8WUX9 453 aaPredicted RBP8.5□□□□□ -1.05
RORA-203ENST00000335670 ISY1Q9ULR0 285 aaKnown RBP8.5□□□□□ -1.05
RORA-203ENST00000335670 TSPY4P0CV99 314 aa8.49□□□□□ -1.05
RORA-203ENST00000335670 TSPY10P0CW01 314 aa8.49□□□□□ -1.05
RORA-203ENST00000335670 CAGE1Q8TC20 777 aa8.49□□□□□ -1.05
RORA-203ENST00000335670 CCNB3Q8WWL7 1395 aa8.49□□□□□ -1.05
RORA-203ENST00000335670 MYO6Q9UM54 1294 aa8.49□□□□□ -1.05
RORA-203ENST00000335670 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
RORA-203ENST00000335670 NUDCQ9Y266 331 aa8.48□□□□□ -1.05
RORA-203ENST00000335670 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
RORA-203ENST00000335670 TCERG1O14776 1098 aaKnown RBP8.48□□□□□ -1.05
RORA-203ENST00000335670 SEPT11Q9NVA2 429 aaKnown RBP8.48□□□□□ -1.05
RORA-203ENST00000335670 AK7Q96M32 723 aa8.48□□□□□ -1.05
RORA-203ENST00000335670 ACBD3Q9H3P7 528 aa8.48□□□□□ -1.05
RORA-203ENST00000335670 NEFHP12036 1026 aa8.46□□□□□ -1.05
RORA-203ENST00000335670 CNKSR2Q8WXI2 1034 aa8.46□□□□□ -1.06
RORA-203ENST00000335670 SCRIBQ14160 1630 aa8.45□□□□□ -1.06
RORA-203ENST00000335670 IPO7O95373 1038 aaKnown RBP8.45□□□□□ -1.06
RORA-203ENST00000335670 TCEAL9Q9UHQ7 104 aa8.45□□□□□ -1.06
RORA-203ENST00000335670 INCENPQ9NQS7 918 aa8.45□□□□□ -1.06
RORA-203ENST00000335670 CWC15Q9P013 229 aaKnown RBP8.45□□□□□ -1.06
RORA-203ENST00000335670 RASSF8Q8NHQ8 419 aa8.45□□□□□ -1.06
RORA-203ENST00000335670 KNSTRNQ9Y448 316 aa8.44□□□□□ -1.06
RORA-203ENST00000335670 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
RORA-203ENST00000335670 ANKRD20A12PQ8NF67 263 aa8.43□□□□□ -1.06
RORA-203ENST00000335670 MAP7D2Q96T17 732 aa8.43□□□□□ -1.06
RORA-203ENST00000335670 RUFY1Q96T51 708 aa8.43□□□□□ -1.06
RORA-203ENST00000335670 FEZ1Q99689 392 aa8.43□□□□□ -1.06
RORA-203ENST00000335670 G3V3G9 751 aa8.42□□□□□ -1.06
RORA-203ENST00000335670 DCAF8Q5TAQ9 597 aa8.42□□□□□ -1.06
RORA-203ENST00000335670 DHX57Q6P158 1386 aaKnown RBP8.42□□□□□ -1.06
RORA-203ENST00000335670 APPP05067 770 aa8.42□□□□□ -1.06
RORA-203ENST00000335670 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
RORA-203ENST00000335670 HOOK1Q9UJC3 728 aaKnown RBP8.42□□□□□ -1.06
RORA-203ENST00000335670 ANKRD18AQ8IVF6 992 aa8.42□□□□□ -1.06
RORA-203ENST00000335670 HIRIP3Q9BW71 556 aaPredicted RBP8.41□□□□□ -1.06
RORA-203ENST00000335670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.06
RORA-203ENST00000335670 SETD5Q9C0A6 1442 aa8.4□□□□□ -1.06
RORA-203ENST00000335670 CCDC173Q0VFZ6 552 aa8.4□□□□□ -1.06
RORA-203ENST00000335670 ATP6V1DQ9Y5K8 247 aa8.4□□□□□ -1.06
RORA-203ENST00000335670 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.07
RORA-203ENST00000335670 KCNH8Q96L42 1107 aa8.4□□□□□ -1.07
RORA-203ENST00000335670 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
RORA-203ENST00000335670 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
RORA-203ENST00000335670 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
RORA-203ENST00000335670 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
RORA-203ENST00000335670 MTUS2Q5JR59 1369 aa8.38□□□□□ -1.07
RORA-203ENST00000335670 ODF2Q5BJF6 829 aa8.38□□□□□ -1.07
RORA-203ENST00000335670 CCDC47Q96A33 483 aaKnown RBP8.38□□□□□ -1.07
RORA-203ENST00000335670 KDM2AQ9Y2K7 1162 aa8.38□□□□□ -1.07
RORA-203ENST00000335670 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
RORA-203ENST00000335670 GSE1Q14687 1217 aa8.38□□□□□ -1.07
RORA-203ENST00000335670 KIF16BQ96L93 1317 aa8.38□□□□□ -1.07
RORA-203ENST00000335670 IPO8O15397 1037 aaKnown RBP8.38□□□□□ -1.07
RORA-203ENST00000335670 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
RORA-203ENST00000335670 ZBED9Q6R2W3 1325 aa8.37□□□□□ -1.07
RORA-203ENST00000335670 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
RORA-203ENST00000335670 TAOK2Q9UL54 1235 aa8.37□□□□□ -1.07
RORA-203ENST00000335670 HMGB1P1B2RPK0 211 aaPredicted RBP8.37□□□□□ -1.07
RORA-203ENST00000335670 FOXD1Q16676 465 aa8.37□□□□□ -1.07
RORA-203ENST00000335670 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
RORA-203ENST00000335670 MTERF4Q7Z6M4 381 aaKnown RBP8.37□□□□□ -1.07
RORA-203ENST00000335670 POGKQ9P215 609 aa8.37□□□□□ -1.07
RORA-203ENST00000335670 EZRP15311 586 aaKnown RBP8.36□□□□□ -1.07
RORA-203ENST00000335670 SIN3AQ96ST3 1273 aa8.36□□□□□ -1.07
RORA-203ENST00000335670 MARCH6O60337 910 aa8.36□□□□□ -1.07
RORA-203ENST00000335670 HSP90AA2PQ14568 343 aaPredicted RBP8.36□□□□□ -1.07
RORA-203ENST00000335670 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
RORA-203ENST00000335670 ERCC4Q92889 916 aaPredicted RBP8.36□□□□□ -1.07
RORA-203ENST00000335670 SOGA1O94964 1423 aa8.36□□□□□ -1.07
RORA-203ENST00000335670 PHF23Q9BUL5 403 aaPredicted RBP8.36□□□□□ -1.07
RORA-203ENST00000335670 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
RORA-203ENST00000335670 FHAD1B1AJZ9 1412 aa8.35□□□□□ -1.07
RORA-203ENST00000335670 RAB3GAP2Q9H2M9 1393 aa8.35□□□□□ -1.07
RORA-203ENST00000335670 AMOTL1Q8IY63 956 aa8.35□□□□□ -1.07
RORA-203ENST00000335670 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
RORA-203ENST00000335670 GOLGA6L19H0YKK7 550 aa8.35□□□□□ -1.07
RORA-203ENST00000335670 VPS53Q5VIR6 699 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms