RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 FGD6Q6ZV73 1430 aa23.37■■□□□ 1.33
CMC1-201ENST00000334841 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
CMC1-201ENST00000334841 TSPOAP1O95153 1857 aa23.36■■□□□ 1.33
CMC1-201ENST00000334841 FANCAO15360 1455 aa23.35■■□□□ 1.33
CMC1-201ENST00000334841 SAMD9LQ8IVG5 1584 aa23.35■■□□□ 1.33
CMC1-201ENST00000334841 CFAP74Q9C0B2 1584 aa23.35■■□□□ 1.33
CMC1-201ENST00000334841 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
CMC1-201ENST00000334841 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.32
CMC1-201ENST00000334841 CFDP1Q9UEE9 299 aaPredicted RBP23.32■■□□□ 1.32
CMC1-201ENST00000334841 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
CMC1-201ENST00000334841 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
CMC1-201ENST00000334841 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
CMC1-201ENST00000334841 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
CMC1-201ENST00000334841 NEO1Q92859 1461 aa23.3■■□□□ 1.32
CMC1-201ENST00000334841 ABCC1P33527 1531 aa23.29■■□□□ 1.32
CMC1-201ENST00000334841 EFCAB2Q5VUJ9 269 aa23.27■■□□□ 1.32
CMC1-201ENST00000334841 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
CMC1-201ENST00000334841 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
CMC1-201ENST00000334841 SYCP2Q9BX26 1530 aa23.25■■□□□ 1.31
CMC1-201ENST00000334841 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
CMC1-201ENST00000334841 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
CMC1-201ENST00000334841 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
CMC1-201ENST00000334841 PLEKHH2Q8IVE3 1493 aa23.22■■□□□ 1.31
CMC1-201ENST00000334841 MBD5Q9P267 1494 aa23.19■■□□□ 1.3
CMC1-201ENST00000334841 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
CMC1-201ENST00000334841 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
CMC1-201ENST00000334841 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
CMC1-201ENST00000334841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.37e-10■□□□□ 8.6
CMC1-201ENST00000334841 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
CMC1-201ENST00000334841 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
CMC1-201ENST00000334841 FAM50AQ14320 339 aaKnown RBP23.16■■□□□ 1.3
CMC1-201ENST00000334841 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
CMC1-201ENST00000334841 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
CMC1-201ENST00000334841 TRAPPC8Q9Y2L5 1435 aa23.15■■□□□ 1.3
CMC1-201ENST00000334841 RICTORQ6R327 1708 aa23.14■■□□□ 1.3
CMC1-201ENST00000334841 CCDC141Q6ZP82 1450 aa23.13■■□□□ 1.29
CMC1-201ENST00000334841 COL17A1Q9UMD9 1497 aaPredicted RBP23.13■■□□□ 1.29
CMC1-201ENST00000334841 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.291e-6■■■■■ 33.5
CMC1-201ENST00000334841 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
CMC1-201ENST00000334841 DAPK1P53355 1430 aa23.12■■□□□ 1.29
CMC1-201ENST00000334841 ABCC5O15440 1437 aa23.11■■□□□ 1.29
CMC1-201ENST00000334841 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
CMC1-201ENST00000334841 KDM5CP41229 1560 aa23.1■■□□□ 1.29
CMC1-201ENST00000334841 KDM6BO15054 1643 aa23.1■■□□□ 1.29
CMC1-201ENST00000334841 SHANK2Q9UPX8 1470 aa23.07■■□□□ 1.28
CMC1-201ENST00000334841 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
CMC1-201ENST00000334841 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
CMC1-201ENST00000334841 ZMYM4Q5VZL5 1548 aa23.06■■□□□ 1.28
CMC1-201ENST00000334841 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
CMC1-201ENST00000334841 MAST1Q9Y2H9 1570 aa23.06■■□□□ 1.28
CMC1-201ENST00000334841 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
CMC1-201ENST00000334841 RAPGEF3O95398 923 aa23.04■■□□□ 1.28
CMC1-201ENST00000334841 AFAP1Q8N556 730 aa23.04■■□□□ 1.28
CMC1-201ENST00000334841 HECW2Q9P2P5 1572 aa23.04■■□□□ 1.28
CMC1-201ENST00000334841 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
CMC1-201ENST00000334841 ADGBQ8N7X0 1667 aa23.01■■□□□ 1.27
CMC1-201ENST00000334841 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
CMC1-201ENST00000334841 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
CMC1-201ENST00000334841 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
CMC1-201ENST00000334841 ITGAEP38570 1179 aa23■■□□□ 1.27
CMC1-201ENST00000334841 KIDINS220Q9ULH0 1771 aa22.99■■□□□ 1.27
CMC1-201ENST00000334841 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
CMC1-201ENST00000334841 MLH3Q9UHC1 1453 aa22.98■■□□□ 1.27
CMC1-201ENST00000334841 PLXNC1O60486 1568 aa22.97■■□□□ 1.27
CMC1-201ENST00000334841 SPAG9O60271 1321 aaKnown RBP22.97■■□□□ 1.27
CMC1-201ENST00000334841 RTEL1-TNFRSF6BF6WH68 1400 aa22.96■■□□□ 1.27
CMC1-201ENST00000334841 ABCA6Q8N139 1617 aa22.96■■□□□ 1.27
CMC1-201ENST00000334841 ARHGEF40Q8TER5 1519 aa22.94■■□□□ 1.26
CMC1-201ENST00000334841 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
CMC1-201ENST00000334841 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
CMC1-201ENST00000334841 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
CMC1-201ENST00000334841 MAGI2Q86UL8 1455 aa22.93■■□□□ 1.26
CMC1-201ENST00000334841 YEATS2Q9ULM3 1422 aa22.93■■□□□ 1.26
CMC1-201ENST00000334841 CHIC2Q9UKJ5 165 aa22.93■■□□□ 1.26
CMC1-201ENST00000334841 ROCK1Q13464 1354 aa22.91■■□□□ 1.26
CMC1-201ENST00000334841 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
CMC1-201ENST00000334841 GCC2Q8IWJ2 1684 aa22.89■■□□□ 1.25
CMC1-201ENST00000334841 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.25
CMC1-201ENST00000334841 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
CMC1-201ENST00000334841 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
CMC1-201ENST00000334841 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
CMC1-201ENST00000334841 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
CMC1-201ENST00000334841 NAIPQ13075 1403 aa22.83■■□□□ 1.25
CMC1-201ENST00000334841 RRP7BPQ9NSQ0 103 aa22.83■■□□□ 1.25
CMC1-201ENST00000334841 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
CMC1-201ENST00000334841 ATP10AO60312 1499 aa22.81■■□□□ 1.24
CMC1-201ENST00000334841 A2MP01023 1474 aa22.81■■□□□ 1.24
CMC1-201ENST00000334841 SIGLEC1Q9BZZ2 1709 aa22.81■■□□□ 1.24
CMC1-201ENST00000334841 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
CMC1-201ENST00000334841 ERBINQ96RT1 1412 aa22.78■■□□□ 1.24
CMC1-201ENST00000334841 EIF2AK4Q9P2K8 1649 aaKnown RBP22.77■■□□□ 1.24
CMC1-201ENST00000334841 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
CMC1-201ENST00000334841 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
CMC1-201ENST00000334841 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
CMC1-201ENST00000334841 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
CMC1-201ENST00000334841 AGLP35573 1532 aa22.72■■□□□ 1.23
CMC1-201ENST00000334841 RNF17Q9BXT8 1623 aaKnown RBP22.7■■□□□ 1.22
CMC1-201ENST00000334841 DEPDC5O75140 1603 aa22.69■■□□□ 1.22
CMC1-201ENST00000334841 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
CMC1-201ENST00000334841 MROH1Q8NDA8 1641 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms