RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ITSN2Q9NZM3 1697 aa27.07■■□□□ 1.92
CHGA-202ENST00000334654 ARHGAP5Q13017 1502 aa27.03■■□□□ 1.92
CHGA-202ENST00000334654 CFDP1Q9UEE9 299 aaPredicted RBP27.02■■□□□ 1.92
CHGA-202ENST00000334654 FANCAO15360 1455 aa27.02■■□□□ 1.92
CHGA-202ENST00000334654 MIA2Q96PC5 1412 aa27.01■■□□□ 1.91
CHGA-202ENST00000334654 EFCAB2Q5VUJ9 269 aa27■■□□□ 1.91
CHGA-202ENST00000334654 FGD6Q6ZV73 1430 aa26.99■■□□□ 1.91
CHGA-202ENST00000334654 TEX14Q8IWB6 1497 aa26.98■■□□□ 1.91
CHGA-202ENST00000334654 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
CHGA-202ENST00000334654 NEO1Q92859 1461 aa26.97■■□□□ 1.91
CHGA-202ENST00000334654 SAMD9LQ8IVG5 1584 aa26.97■■□□□ 1.91
CHGA-202ENST00000334654 AKNAQ7Z591 1439 aa26.95■■□□□ 1.91
CHGA-202ENST00000334654 CFAP74Q9C0B2 1584 aa26.95■■□□□ 1.9
CHGA-202ENST00000334654 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
CHGA-202ENST00000334654 PTPN23Q9H3S7 1636 aa26.93■■□□□ 1.9
CHGA-202ENST00000334654 TCOF1Q13428 1488 aaKnown RBP26.92■■□□□ 1.9
CHGA-202ENST00000334654 CAMSAP2Q08AD1 1489 aa26.91■■□□□ 1.9
CHGA-202ENST00000334654 RRBP1Q9P2E9 1410 aaKnown RBP26.91■■□□□ 1.9
CHGA-202ENST00000334654 ARHGEF12Q9NZN5 1544 aa26.91■■□□□ 1.9
CHGA-202ENST00000334654 ABCC1P33527 1531 aa26.89■■□□□ 1.9
CHGA-202ENST00000334654 ADGRL1O94910 1474 aa26.88■■□□□ 1.89
CHGA-202ENST00000334654 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
CHGA-202ENST00000334654 KIAA1107Q9UPP5 1409 aa26.87■■□□□ 1.89
CHGA-202ENST00000334654 MBD5Q9P267 1494 aa26.86■■□□□ 1.89
CHGA-202ENST00000334654 SCAPERQ9BY12 1400 aa26.86■■□□□ 1.89
CHGA-202ENST00000334654 PLEKHH2Q8IVE3 1493 aa26.85■■□□□ 1.89
CHGA-202ENST00000334654 SYCP2Q9BX26 1530 aa26.85■■□□□ 1.89
CHGA-202ENST00000334654 HNRNPMP52272 730 aaKnown RBP eCLIP26.84■■□□□ 1.89
CHGA-202ENST00000334654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.82■■□□□ 1.88
CHGA-202ENST00000334654 TRAPPC8Q9Y2L5 1435 aa26.81■■□□□ 1.88
CHGA-202ENST00000334654 FAM50AQ14320 339 aaKnown RBP26.8■■□□□ 1.88
CHGA-202ENST00000334654 DENND4BO75064 1496 aaPredicted RBP26.79■■□□□ 1.88
CHGA-202ENST00000334654 RICTORQ6R327 1708 aa26.78■■□□□ 1.88
CHGA-202ENST00000334654 ARHGEF5Q12774 1597 aa26.78■■□□□ 1.88
CHGA-202ENST00000334654 RAPGEF3O95398 923 aa26.77■■□□□ 1.88
CHGA-202ENST00000334654 POGZQ7Z3K3 1410 aa26.77■■□□□ 1.88
CHGA-202ENST00000334654 FRMPD1Q5SYB0 1578 aa26.77■■□□□ 1.88
CHGA-202ENST00000334654 AFAP1Q8N556 730 aa26.75■■□□□ 1.87
CHGA-202ENST00000334654 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
CHGA-202ENST00000334654 ABCC5O15440 1437 aa26.74■■□□□ 1.87
CHGA-202ENST00000334654 KDM6BO15054 1643 aa26.73■■□□□ 1.87
CHGA-202ENST00000334654 RSPH4AQ5TD94 716 aa26.73■■□□□ 1.87
CHGA-202ENST00000334654 ZNF518AQ6AHZ1 1483 aa26.72■■□□□ 1.87
CHGA-202ENST00000334654 CCDC141Q6ZP82 1450 aa26.72■■□□□ 1.87
CHGA-202ENST00000334654 KDM5CP41229 1560 aa26.72■■□□□ 1.87
CHGA-202ENST00000334654 DAPK1P53355 1430 aa26.71■■□□□ 1.87
CHGA-202ENST00000334654 PTPRKQ15262 1439 aa26.7■■□□□ 1.86
CHGA-202ENST00000334654 CROCC2H7BZ55 1655 aa26.68■■□□□ 1.86
CHGA-202ENST00000334654 ZMYM4Q5VZL5 1548 aa26.66■■□□□ 1.86
CHGA-202ENST00000334654 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
CHGA-202ENST00000334654 MLH3Q9UHC1 1453 aa26.63■■□□□ 1.85
CHGA-202ENST00000334654 SHANK2Q9UPX8 1470 aa26.63■■□□□ 1.85
CHGA-202ENST00000334654 KIDINS220Q9ULH0 1771 aa26.62■■□□□ 1.85
CHGA-202ENST00000334654 INO80Q9ULG1 1556 aaPredicted RBP26.62■■□□□ 1.85
CHGA-202ENST00000334654 SPAG9O60271 1321 aaKnown RBP26.62■■□□□ 1.85
CHGA-202ENST00000334654 TSPY4P0CV99 314 aa26.62■■□□□ 1.85
CHGA-202ENST00000334654 TSPY10P0CW01 314 aa26.62■■□□□ 1.85
CHGA-202ENST00000334654 ITGAEP38570 1179 aa26.62■■□□□ 1.85
CHGA-202ENST00000334654 C9orf84Q5VXU9 1444 aa26.61■■□□□ 1.85
CHGA-202ENST00000334654 RTEL1-TNFRSF6BF6WH68 1400 aa26.61■■□□□ 1.85
CHGA-202ENST00000334654 HECW2Q9P2P5 1572 aa26.6■■□□□ 1.85
CHGA-202ENST00000334654 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
CHGA-202ENST00000334654 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
CHGA-202ENST00000334654 ATP7AQ04656 1500 aa26.58■■□□□ 1.85
CHGA-202ENST00000334654 CHIC2Q9UKJ5 165 aa26.58■■□□□ 1.85
CHGA-202ENST00000334654 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
CHGA-202ENST00000334654 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
CHGA-202ENST00000334654 ADGRL2O95490 1459 aa26.56■■□□□ 1.84
CHGA-202ENST00000334654 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
CHGA-202ENST00000334654 ADGBQ8N7X0 1667 aa26.53■■□□□ 1.84
CHGA-202ENST00000334654 ABCA6Q8N139 1617 aa26.53■■□□□ 1.84
CHGA-202ENST00000334654 PLXNC1O60486 1568 aa26.51■■□□□ 1.83
CHGA-202ENST00000334654 DIP2CQ9Y2E4 1556 aa26.51■■□□□ 1.83
CHGA-202ENST00000334654 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
CHGA-202ENST00000334654 MYT1LQ9UL68 1186 aa26.49■■□□□ 1.83
CHGA-202ENST00000334654 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
CHGA-202ENST00000334654 ARHGEF40Q8TER5 1519 aa26.48■■□□□ 1.83
CHGA-202ENST00000334654 RRP7BPQ9NSQ0 103 aa26.46■■□□□ 1.83
CHGA-202ENST00000334654 ATP10AO60312 1499 aa26.44■■□□□ 1.82
CHGA-202ENST00000334654 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
CHGA-202ENST00000334654 SIGLEC1Q9BZZ2 1709 aa26.41■■□□□ 1.82
CHGA-202ENST00000334654 A2MP01023 1474 aa26.41■■□□□ 1.82
CHGA-202ENST00000334654 NAIPQ13075 1403 aa26.4■■□□□ 1.82
CHGA-202ENST00000334654 DHX29Q7Z478 1369 aaKnown RBP26.4■■□□□ 1.82
CHGA-202ENST00000334654 REREQ9P2R6 1566 aa26.4■■□□□ 1.82
CHGA-202ENST00000334654 HFM1A2PYH4 1435 aa26.4■■□□□ 1.82
CHGA-202ENST00000334654 DUOX2Q9NRD8 1548 aa26.39■■□□□ 1.82
CHGA-202ENST00000334654 GCC2Q8IWJ2 1684 aa26.37■■□□□ 1.81
CHGA-202ENST00000334654 ANKRD50Q9ULJ7 1429 aa26.33■■□□□ 1.81
CHGA-202ENST00000334654 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
CHGA-202ENST00000334654 ERBINQ96RT1 1412 aa26.32■■□□□ 1.8
CHGA-202ENST00000334654 AGLP35573 1532 aa26.31■■□□□ 1.8
CHGA-202ENST00000334654 BCORL1Q5H9F3 1711 aa26.3■■□□□ 1.8
CHGA-202ENST00000334654 SETD5Q9C0A6 1442 aa26.29■■□□□ 1.8
CHGA-202ENST00000334654 EIF2AK4Q9P2K8 1649 aaKnown RBP26.29■■□□□ 1.8
CHGA-202ENST00000334654 KIF3BO15066 747 aa26.25■■□□□ 1.79
CHGA-202ENST00000334654 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
CHGA-202ENST00000334654 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
CHGA-202ENST00000334654 RNF17Q9BXT8 1623 aaKnown RBP26.21■■□□□ 1.79
CHGA-202ENST00000334654 DEPDC5O75140 1603 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms