RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 RAPGEF3O95398 923 aa20.85■□□□□ 0.93
TUBB2A-201ENST00000333628 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
TUBB2A-201ENST00000333628 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.93
TUBB2A-201ENST00000333628 CDC42BPAQ5VT25 1732 aa20.83■□□□□ 0.92
TUBB2A-201ENST00000333628 RICTORQ6R327 1708 aa20.82■□□□□ 0.92
TUBB2A-201ENST00000333628 PREX2Q70Z35 1606 aa20.81■□□□□ 0.92
TUBB2A-201ENST00000333628 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
TUBB2A-201ENST00000333628 ARHGAP5Q13017 1502 aa20.81■□□□□ 0.92
TUBB2A-201ENST00000333628 LRRC9Q6ZRR7 1453 aa20.8■□□□□ 0.92
TUBB2A-201ENST00000333628 EHBP1L1Q8N3D4 1523 aa20.79■□□□□ 0.92
TUBB2A-201ENST00000333628 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
TUBB2A-201ENST00000333628 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
TUBB2A-201ENST00000333628 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
TUBB2A-201ENST00000333628 SCAPERQ9BY12 1400 aa20.76■□□□□ 0.91
TUBB2A-201ENST00000333628 GPATCH8Q9UKJ3 1502 aaKnown RBP20.74■□□□□ 0.91
TUBB2A-201ENST00000333628 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
TUBB2A-201ENST00000333628 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
TUBB2A-201ENST00000333628 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
TUBB2A-201ENST00000333628 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
TUBB2A-201ENST00000333628 POGZQ7Z3K3 1410 aa20.71■□□□□ 0.91
TUBB2A-201ENST00000333628 ZMYM4Q5VZL5 1548 aa20.69■□□□□ 0.9
TUBB2A-201ENST00000333628 ITSN2Q9NZM3 1697 aa20.68■□□□□ 0.9
TUBB2A-201ENST00000333628 ABCC1P33527 1531 aa20.68■□□□□ 0.9
TUBB2A-201ENST00000333628 ARHGEF12Q9NZN5 1544 aa20.68■□□□□ 0.9
TUBB2A-201ENST00000333628 SAMD9LQ8IVG5 1584 aa20.68■□□□□ 0.9
TUBB2A-201ENST00000333628 ZNF777Q9ULD5 760 aaPredicted RBP20.68■□□□□ 0.9
TUBB2A-201ENST00000333628 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
TUBB2A-201ENST00000333628 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
TUBB2A-201ENST00000333628 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
TUBB2A-201ENST00000333628 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
TUBB2A-201ENST00000333628 YEATS2Q9ULM3 1422 aa20.64■□□□□ 0.9
TUBB2A-201ENST00000333628 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.89
TUBB2A-201ENST00000333628 ZNF518AQ6AHZ1 1483 aa20.64■□□□□ 0.89
TUBB2A-201ENST00000333628 TRAPPC8Q9Y2L5 1435 aa20.63■□□□□ 0.89
TUBB2A-201ENST00000333628 KDM5CP41229 1560 aa20.62■□□□□ 0.89
TUBB2A-201ENST00000333628 SYCP2Q9BX26 1530 aa20.62■□□□□ 0.89
TUBB2A-201ENST00000333628 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
TUBB2A-201ENST00000333628 SIGLEC1Q9BZZ2 1709 aa20.61■□□□□ 0.89
TUBB2A-201ENST00000333628 ZNF644Q9H582 1327 aaPredicted RBP20.59■□□□□ 0.89
TUBB2A-201ENST00000333628 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
TUBB2A-201ENST00000333628 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.88
TUBB2A-201ENST00000333628 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
TUBB2A-201ENST00000333628 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
TUBB2A-201ENST00000333628 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
TUBB2A-201ENST00000333628 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
TUBB2A-201ENST00000333628 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
TUBB2A-201ENST00000333628 KIAA1107Q9UPP5 1409 aa20.54■□□□□ 0.88
TUBB2A-201ENST00000333628 BCORL1Q5H9F3 1711 aa20.54■□□□□ 0.88
TUBB2A-201ENST00000333628 ABCA6Q8N139 1617 aa20.53■□□□□ 0.88
TUBB2A-201ENST00000333628 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
TUBB2A-201ENST00000333628 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
TUBB2A-201ENST00000333628 DIP2CQ9Y2E4 1556 aa20.52■□□□□ 0.88
TUBB2A-201ENST00000333628 ATP10AO60312 1499 aa20.52■□□□□ 0.88
TUBB2A-201ENST00000333628 CAMSAP2Q08AD1 1489 aa20.51■□□□□ 0.87
TUBB2A-201ENST00000333628 ADAMTSL3P82987 1691 aa20.51■□□□□ 0.87
TUBB2A-201ENST00000333628 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
TUBB2A-201ENST00000333628 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
TUBB2A-201ENST00000333628 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
TUBB2A-201ENST00000333628 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
TUBB2A-201ENST00000333628 INO80Q9ULG1 1556 aaPredicted RBP20.47■□□□□ 0.87
TUBB2A-201ENST00000333628 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
TUBB2A-201ENST00000333628 ATP7AQ04656 1500 aa20.46■□□□□ 0.87
TUBB2A-201ENST00000333628 MADDQ8WXG6 1647 aa20.46■□□□□ 0.87
TUBB2A-201ENST00000333628 MLECQ14165 292 aa20.44■□□□□ 0.86
TUBB2A-201ENST00000333628 RSPH4AQ5TD94 716 aa20.43■□□□□ 0.86
TUBB2A-201ENST00000333628 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
TUBB2A-201ENST00000333628 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
TUBB2A-201ENST00000333628 RIMS1Q86UR5 1692 aaKnown RBP20.41■□□□□ 0.86
TUBB2A-201ENST00000333628 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
TUBB2A-201ENST00000333628 ARHGEF5Q12774 1597 aa20.41■□□□□ 0.86
TUBB2A-201ENST00000333628 TCOF1Q13428 1488 aaKnown RBP20.4■□□□□ 0.86
TUBB2A-201ENST00000333628 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
TUBB2A-201ENST00000333628 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.86
TUBB2A-201ENST00000333628 PTPRMP28827 1452 aa20.38■□□□□ 0.85
TUBB2A-201ENST00000333628 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
TUBB2A-201ENST00000333628 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
TUBB2A-201ENST00000333628 ADGBQ8N7X0 1667 aa20.37■□□□□ 0.85
TUBB2A-201ENST00000333628 AGLP35573 1532 aa20.36■□□□□ 0.85
TUBB2A-201ENST00000333628 RTEL1-TNFRSF6BF6WH68 1400 aa20.35■□□□□ 0.85
TUBB2A-201ENST00000333628 A2MP01023 1474 aa20.34■□□□□ 0.85
TUBB2A-201ENST00000333628 PLXNC1O60486 1568 aa20.33■□□□□ 0.85
TUBB2A-201ENST00000333628 ABCC5O15440 1437 aa20.33■□□□□ 0.85
TUBB2A-201ENST00000333628 DAPK1P53355 1430 aa20.3■□□□□ 0.84
TUBB2A-201ENST00000333628 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
TUBB2A-201ENST00000333628 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
TUBB2A-201ENST00000333628 MAST1Q9Y2H9 1570 aa20.3■□□□□ 0.84
TUBB2A-201ENST00000333628 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
TUBB2A-201ENST00000333628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.845e-7■■□□□ 12.7
TUBB2A-201ENST00000333628 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
TUBB2A-201ENST00000333628 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
TUBB2A-201ENST00000333628 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
TUBB2A-201ENST00000333628 ITGAEP38570 1179 aa20.25■□□□□ 0.83
TUBB2A-201ENST00000333628 CEBPAP49715 358 aaPredicted RBP20.23■□□□□ 0.83
TUBB2A-201ENST00000333628 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
TUBB2A-201ENST00000333628 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
TUBB2A-201ENST00000333628 GGT6Q6P531 493 aa20.22■□□□□ 0.83
TUBB2A-201ENST00000333628 C3P01024 1663 aa20.22■□□□□ 0.83
TUBB2A-201ENST00000333628 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
TUBB2A-201ENST00000333628 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
TUBB2A-201ENST00000333628 ESF1Q9H501 851 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms