RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
VIPAS39-201ENST00000327028 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
VIPAS39-201ENST00000327028 PLCH2O75038 1416 aa15.59■□□□□ 0.09
VIPAS39-201ENST00000327028 CFDP1Q9UEE9 299 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-201ENST00000327028 ARHGAP5Q13017 1502 aa15.59■□□□□ 0.09
VIPAS39-201ENST00000327028 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-201ENST00000327028 SAMD9LQ8IVG5 1584 aa15.57■□□□□ 0.08
VIPAS39-201ENST00000327028 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
VIPAS39-201ENST00000327028 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
VIPAS39-201ENST00000327028 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
VIPAS39-201ENST00000327028 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
VIPAS39-201ENST00000327028 ZNF644Q9H582 1327 aaPredicted RBP15.53■□□□□ 0.08
VIPAS39-201ENST00000327028 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
VIPAS39-201ENST00000327028 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.08
VIPAS39-201ENST00000327028 ARHGEF5Q12774 1597 aa15.52■□□□□ 0.07
VIPAS39-201ENST00000327028 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-201ENST00000327028 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
VIPAS39-201ENST00000327028 FANCAO15360 1455 aa15.51■□□□□ 0.07
VIPAS39-201ENST00000327028 EFCAB2Q5VUJ9 269 aa15.51■□□□□ 0.07
VIPAS39-201ENST00000327028 ABCC1P33527 1531 aa15.51■□□□□ 0.07
VIPAS39-201ENST00000327028 DAPK1P53355 1430 aa15.5■□□□□ 0.07
VIPAS39-201ENST00000327028 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
VIPAS39-201ENST00000327028 SYCP2Q9BX26 1530 aa15.49■□□□□ 0.07
VIPAS39-201ENST00000327028 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
VIPAS39-201ENST00000327028 ABCC5O15440 1437 aa15.48■□□□□ 0.07
VIPAS39-201ENST00000327028 PTPRKQ15262 1439 aa15.48■□□□□ 0.07
VIPAS39-201ENST00000327028 FAM69CQ0P6D2 419 aa15.47■□□□□ 0.07
VIPAS39-201ENST00000327028 ITGAEP38570 1179 aa15.47■□□□□ 0.07
VIPAS39-201ENST00000327028 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
VIPAS39-201ENST00000327028 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
VIPAS39-201ENST00000327028 PPRC1Q5VV67 1664 aaKnown RBP15.46■□□□□ 0.07
VIPAS39-201ENST00000327028 NEO1Q92859 1461 aa15.46■□□□□ 0.07
VIPAS39-201ENST00000327028 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
VIPAS39-201ENST00000327028 ADGBQ8N7X0 1667 aa15.45■□□□□ 0.06
VIPAS39-201ENST00000327028 ADGRL1O94910 1474 aa15.44■□□□□ 0.06
VIPAS39-201ENST00000327028 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
VIPAS39-201ENST00000327028 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
VIPAS39-201ENST00000327028 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
VIPAS39-201ENST00000327028 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-201ENST00000327028 RSPH4AQ5TD94 716 aa15.42■□□□□ 0.06
VIPAS39-201ENST00000327028 TEX14Q8IWB6 1497 aa15.42■□□□□ 0.06
VIPAS39-201ENST00000327028 ADGRL2O95490 1459 aa15.42■□□□□ 0.06
VIPAS39-201ENST00000327028 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
VIPAS39-201ENST00000327028 GCC2Q8IWJ2 1684 aa15.41■□□□□ 0.06
VIPAS39-201ENST00000327028 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
VIPAS39-201ENST00000327028 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
VIPAS39-201ENST00000327028 SCAPERQ9BY12 1400 aa15.4■□□□□ 0.06
VIPAS39-201ENST00000327028 TRAPPC8Q9Y2L5 1435 aa15.4■□□□□ 0.06
VIPAS39-201ENST00000327028 POGZQ7Z3K3 1410 aa15.37■□□□□ 0.05
VIPAS39-201ENST00000327028 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
VIPAS39-201ENST00000327028 SETD5Q9C0A6 1442 aa15.37■□□□□ 0.05
VIPAS39-201ENST00000327028 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
VIPAS39-201ENST00000327028 NAIPQ13075 1403 aa15.36■□□□□ 0.05
VIPAS39-201ENST00000327028 ZNF518AQ6AHZ1 1483 aa15.36■□□□□ 0.05
VIPAS39-201ENST00000327028 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
VIPAS39-201ENST00000327028 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
VIPAS39-201ENST00000327028 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
VIPAS39-201ENST00000327028 KDM5CP41229 1560 aa15.35■□□□□ 0.05
VIPAS39-201ENST00000327028 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
VIPAS39-201ENST00000327028 ZFYVE16Q7Z3T8 1539 aa15.35■□□□□ 0.05
VIPAS39-201ENST00000327028 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
VIPAS39-201ENST00000327028 DENND4BO75064 1496 aaPredicted RBP15.35■□□□□ 0.05
VIPAS39-201ENST00000327028 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
VIPAS39-201ENST00000327028 RTEL1-TNFRSF6BF6WH68 1400 aa15.34■□□□□ 0.05
VIPAS39-201ENST00000327028 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
VIPAS39-201ENST00000327028 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
VIPAS39-201ENST00000327028 RRP7BPQ9NSQ0 103 aa15.32■□□□□ 0.04
VIPAS39-201ENST00000327028 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
VIPAS39-201ENST00000327028 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-201ENST00000327028 HECW2Q9P2P5 1572 aa15.31■□□□□ 0.04
VIPAS39-201ENST00000327028 AFAP1Q8N556 730 aa15.3■□□□□ 0.04
VIPAS39-201ENST00000327028 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
VIPAS39-201ENST00000327028 KIDINS220Q9ULH0 1771 aa15.3■□□□□ 0.04
VIPAS39-201ENST00000327028 KDM6BO15054 1643 aa15.29■□□□□ 0.04
VIPAS39-201ENST00000327028 ZMYM4Q5VZL5 1548 aa15.29■□□□□ 0.04
VIPAS39-201ENST00000327028 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
VIPAS39-201ENST00000327028 HRCP23327 699 aa15.29■□□□□ 0.04
VIPAS39-201ENST00000327028 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-201ENST00000327028 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
VIPAS39-201ENST00000327028 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
VIPAS39-201ENST00000327028 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
VIPAS39-201ENST00000327028 ABCA6Q8N139 1617 aa15.24■□□□□ 0.03
VIPAS39-201ENST00000327028 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
VIPAS39-201ENST00000327028 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
VIPAS39-201ENST00000327028 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
VIPAS39-201ENST00000327028 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-201ENST00000327028 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
VIPAS39-201ENST00000327028 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-201ENST00000327028 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
VIPAS39-201ENST00000327028 UNC13BO14795 1591 aa15.2■□□□□ 0.02
VIPAS39-201ENST00000327028 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-201ENST00000327028 A2MP01023 1474 aa15.19■□□□□ 0.02
VIPAS39-201ENST00000327028 ARHGEF40Q8TER5 1519 aa15.18■□□□□ 0.02
VIPAS39-201ENST00000327028 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
VIPAS39-201ENST00000327028 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-201ENST00000327028 YEATS2Q9ULM3 1422 aa15.18■□□□□ 0.02
VIPAS39-201ENST00000327028 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
VIPAS39-201ENST00000327028 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
VIPAS39-201ENST00000327028 REREQ9P2R6 1566 aa15.16■□□□□ 0.02
VIPAS39-201ENST00000327028 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms