RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 MAGI2Q86UL8 1455 aa34.3■■■■□ 3.08
UBE2D3-201ENST00000321805 ARHGAP5Q13017 1502 aa34.3■■■■□ 3.08
UBE2D3-201ENST00000321805 SCAPERQ9BY12 1400 aa34.3■■■■□ 3.08
UBE2D3-201ENST00000321805 PREX2Q70Z35 1606 aa34.26■■■■□ 3.08
UBE2D3-201ENST00000321805 ZFYVE16Q7Z3T8 1539 aa34.24■■■■□ 3.07
UBE2D3-201ENST00000321805 CDC42BPBQ9Y5S2 1711 aa34.24■■■■□ 3.07
UBE2D3-201ENST00000321805 ZNF518AQ6AHZ1 1483 aa34.19■■■■□ 3.06
UBE2D3-201ENST00000321805 ADAMTSL3P82987 1691 aa34.18■■■■□ 3.06
UBE2D3-201ENST00000321805 BCORL1Q5H9F3 1711 aa34.16■■■■□ 3.06
UBE2D3-201ENST00000321805 CDC42BPAQ5VT25 1732 aa34.16■■■■□ 3.06
UBE2D3-201ENST00000321805 KDM5CP41229 1560 aa34.15■■■■□ 3.06
UBE2D3-201ENST00000321805 YEATS2Q9ULM3 1422 aa34.14■■■■□ 3.06
UBE2D3-201ENST00000321805 ABCC1P33527 1531 aa34.12■■■■□ 3.05
UBE2D3-201ENST00000321805 MTUS2Q5JR59 1369 aa34.11■■■■□ 3.05
UBE2D3-201ENST00000321805 ARID4BQ4LE39 1312 aaPredicted RBP34.09■■■■□ 3.05
UBE2D3-201ENST00000321805 EHBP1L1Q8N3D4 1523 aa34.08■■■■□ 3.05
UBE2D3-201ENST00000321805 GPATCH8Q9UKJ3 1502 aaKnown RBP34.06■■■■□ 3.04
UBE2D3-201ENST00000321805 ITSN2Q9NZM3 1697 aa34.06■■■■□ 3.04
UBE2D3-201ENST00000321805 LOC105371045A0A1W2PR82 267 aa34.05■■■■□ 3.04
UBE2D3-201ENST00000321805 HECW2Q9P2P5 1572 aa34.05■■■■□ 3.04
UBE2D3-201ENST00000321805 ATP10AO60312 1499 aa34.04■■■■□ 3.04
UBE2D3-201ENST00000321805 C9orf84Q5VXU9 1444 aa34.03■■■■□ 3.04
UBE2D3-201ENST00000321805 MADDQ8WXG6 1647 aa34.02■■■■□ 3.04
UBE2D3-201ENST00000321805 PTPRMP28827 1452 aa34.01■■■■□ 3.04
UBE2D3-201ENST00000321805 MLH3Q9UHC1 1453 aa34.01■■■■□ 3.03
UBE2D3-201ENST00000321805 ARHGEF12Q9NZN5 1544 aa34■■■■□ 3.03
UBE2D3-201ENST00000321805 VPS8Q8N3P4 1428 aa34■■■■□ 3.03
UBE2D3-201ENST00000321805 AFAP1Q8N556 730 aa34■■■■□ 3.03
UBE2D3-201ENST00000321805 CCNB3Q8WWL7 1395 aa33.99■■■■□ 3.03
UBE2D3-201ENST00000321805 SIGLEC1Q9BZZ2 1709 aa33.99■■■■□ 3.03
UBE2D3-201ENST00000321805 SAMD9LQ8IVG5 1584 aa33.98■■■■□ 3.03
UBE2D3-201ENST00000321805 TRAPPC8Q9Y2L5 1435 aa33.96■■■■□ 3.03
UBE2D3-201ENST00000321805 PLEKHH2Q8IVE3 1493 aa33.95■■■■□ 3.03
UBE2D3-201ENST00000321805 REREQ9P2R6 1566 aa33.95■■■■□ 3.03
UBE2D3-201ENST00000321805 DIP2CQ9Y2E4 1556 aa33.94■■■■□ 3.02
UBE2D3-201ENST00000321805 KIAA1107Q9UPP5 1409 aa33.93■■■■□ 3.02
UBE2D3-201ENST00000321805 TIAM1Q13009 1591 aa33.92■■■■□ 3.02
UBE2D3-201ENST00000321805 CFDP1Q9UEE9 299 aaPredicted RBP33.91■■■■□ 3.02
UBE2D3-201ENST00000321805 SYCP2Q9BX26 1530 aa33.9■■■■□ 3.02
UBE2D3-201ENST00000321805 RIMS1Q86UR5 1692 aaKnown RBP33.9■■■■□ 3.02
UBE2D3-201ENST00000321805 ABCA6Q8N139 1617 aa33.89■■■■□ 3.02
UBE2D3-201ENST00000321805 ZNF777Q9ULD5 760 aaPredicted RBP33.88■■■■□ 3.01
UBE2D3-201ENST00000321805 SUPT6HQ7KZ85 1726 aaKnown RBP33.87■■■■□ 3.01
UBE2D3-201ENST00000321805 MYT1LQ9UL68 1186 aa33.86■■■■□ 3.01
UBE2D3-201ENST00000321805 KIDINS220Q9ULH0 1771 aa33.85■■■■□ 3.01
UBE2D3-201ENST00000321805 MAP3K1Q13233 1512 aa33.84■■■■□ 3.01
UBE2D3-201ENST00000321805 FER1L4A9Z1Z3 1794 aa33.84■■■■□ 3.01
UBE2D3-201ENST00000321805 NCOA2Q15596 1464 aa33.82■■■■□ 3
UBE2D3-201ENST00000321805 AGLP35573 1532 aa33.81■■■■□ 3
UBE2D3-201ENST00000321805 LRRC9Q6ZRR7 1453 aa33.77■■■■□ 3
UBE2D3-201ENST00000321805 HNRNPMP52272 730 aaKnown RBP eCLIP33.76■■■□□ 2.994e-13■■■■■ 32.7
UBE2D3-201ENST00000321805 MLECQ14165 292 aa33.76■■■□□ 2.99
UBE2D3-201ENST00000321805 SPAG9O60271 1321 aaKnown RBP33.76■■■□□ 2.99
UBE2D3-201ENST00000321805 INO80Q9ULG1 1556 aaPredicted RBP33.75■■■□□ 2.99
UBE2D3-201ENST00000321805 ATP7AQ04656 1500 aa33.74■■■□□ 2.99
UBE2D3-201ENST00000321805 MBD5Q9P267 1494 aa33.7■■■□□ 2.99
UBE2D3-201ENST00000321805 ZNF644Q9H582 1327 aaPredicted RBP33.66■■■□□ 2.98
UBE2D3-201ENST00000321805 CAMSAP2Q08AD1 1489 aa33.63■■■□□ 2.97
UBE2D3-201ENST00000321805 LMTK3Q96Q04 1460 aa33.63■■■□□ 2.97
UBE2D3-201ENST00000321805 PLXNC1O60486 1568 aa33.63■■■□□ 2.97
UBE2D3-201ENST00000321805 RTEL1-TNFRSF6BF6WH68 1400 aa33.62■■■□□ 2.97
UBE2D3-201ENST00000321805 RSPH4AQ5TD94 716 aa33.6■■■□□ 2.97
UBE2D3-201ENST00000321805 CCDC141Q6ZP82 1450 aa33.6■■■□□ 2.97
UBE2D3-201ENST00000321805 ADGBQ8N7X0 1667 aa33.59■■■□□ 2.97
UBE2D3-201ENST00000321805 A2MP01023 1474 aa33.58■■■□□ 2.97
UBE2D3-201ENST00000321805 ARHGEF5Q12774 1597 aa33.56■■■□□ 2.96
UBE2D3-201ENST00000321805 CNTLNQ9NXG0 1405 aa33.56■■■□□ 2.96
UBE2D3-201ENST00000321805 KANK4Q5T7N3 995 aaPredicted RBP33.56■■■□□ 2.96
UBE2D3-201ENST00000321805 APLP2Q06481 763 aa33.53■■■□□ 2.96
UBE2D3-201ENST00000321805 MIA2Q96PC5 1412 aa33.53■■■□□ 2.96
UBE2D3-201ENST00000321805 ESF1Q9H501 851 aaKnown RBP33.52■■■□□ 2.96
UBE2D3-201ENST00000321805 MYOM3Q5VTT5 1437 aa33.52■■■□□ 2.96
UBE2D3-201ENST00000321805 PLPPR3Q6T4P5 718 aa33.51■■■□□ 2.95
UBE2D3-201ENST00000321805 PREX1Q8TCU6 1659 aa33.49■■■□□ 2.95
UBE2D3-201ENST00000321805 MROH2AA6NES4 1674 aa33.48■■■□□ 2.95
UBE2D3-201ENST00000321805 C3P01024 1663 aa33.48■■■□□ 2.95
UBE2D3-201ENST00000321805 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
UBE2D3-201ENST00000321805 CEBPAP49715 358 aaPredicted RBP33.44■■■□□ 2.94
UBE2D3-201ENST00000321805 DHX29Q7Z478 1369 aaKnown RBP33.43■■■□□ 2.94
UBE2D3-201ENST00000321805 PPP6R1Q9UPN7 881 aa33.41■■■□□ 2.94
UBE2D3-201ENST00000321805 MAST1Q9Y2H9 1570 aa33.4■■■□□ 2.94
UBE2D3-201ENST00000321805 TSPY4P0CV99 314 aa33.39■■■□□ 2.94
UBE2D3-201ENST00000321805 TSPY10P0CW01 314 aa33.39■■■□□ 2.94
UBE2D3-201ENST00000321805 UHRF1BP1Q6BDS2 1440 aa33.37■■■□□ 2.93
UBE2D3-201ENST00000321805 NPATQ14207 1427 aa33.34■■■□□ 2.93
UBE2D3-201ENST00000321805 FAM135AQ9P2D6 1515 aa33.33■■■□□ 2.93
UBE2D3-201ENST00000321805 CLTCQ00610 1675 aaKnown RBP33.33■■■□□ 2.93
UBE2D3-201ENST00000321805 HSPA2P54652 639 aa33.33■■■□□ 2.93
UBE2D3-201ENST00000321805 ZMYM3Q14202 1370 aa33.32■■■□□ 2.92
UBE2D3-201ENST00000321805 GGT6Q6P531 493 aa33.31■■■□□ 2.92
UBE2D3-201ENST00000321805 PTPN23Q9H3S7 1636 aa33.29■■■□□ 2.92
UBE2D3-201ENST00000321805 FGD6Q6ZV73 1430 aa33.26■■■□□ 2.91
UBE2D3-201ENST00000321805 TCOF1Q13428 1488 aaKnown RBP33.25■■■□□ 2.91
UBE2D3-201ENST00000321805 SHANK2Q9UPX8 1470 aa33.25■■■□□ 2.91
UBE2D3-201ENST00000321805 KIF3BO15066 747 aa33.23■■■□□ 2.91
UBE2D3-201ENST00000321805 CROCC2H7BZ55 1655 aa33.22■■■□□ 2.91
UBE2D3-201ENST00000321805 EIF2AK4Q9P2K8 1649 aaKnown RBP33.21■■■□□ 2.91
UBE2D3-201ENST00000321805 KDM5DQ9BY66 1539 aa33.21■■■□□ 2.91
UBE2D3-201ENST00000321805 PTPRKQ15262 1439 aa33.19■■■□□ 2.9
UBE2D3-201ENST00000321805 DNMT1P26358 1616 aaKnown RBP33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms