RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.8
APTX-201ENST00000309615 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
APTX-201ENST00000309615 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
APTX-201ENST00000309615 NEO1Q92859 1461 aa20■□□□□ 0.79
APTX-201ENST00000309615 PHLDB1Q86UU1 1377 aa19.99■□□□□ 0.79
APTX-201ENST00000309615 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
APTX-201ENST00000309615 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
APTX-201ENST00000309615 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
APTX-201ENST00000309615 CFAP74Q9C0B2 1584 aa19.97■□□□□ 0.79
APTX-201ENST00000309615 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
APTX-201ENST00000309615 COL17A1Q9UMD9 1497 aaPredicted RBP19.96■□□□□ 0.79
APTX-201ENST00000309615 ADGRL1O94910 1474 aa19.93■□□□□ 0.78
APTX-201ENST00000309615 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
APTX-201ENST00000309615 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
APTX-201ENST00000309615 KDM6BO15054 1643 aa19.92■□□□□ 0.78
APTX-201ENST00000309615 SCAPERQ9BY12 1400 aa19.91■□□□□ 0.78
APTX-201ENST00000309615 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
APTX-201ENST00000309615 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
APTX-201ENST00000309615 ABCC1P33527 1531 aa19.89■□□□□ 0.78
APTX-201ENST00000309615 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
APTX-201ENST00000309615 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
APTX-201ENST00000309615 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
APTX-201ENST00000309615 CAMSAP2Q08AD1 1489 aa19.87■□□□□ 0.77
APTX-201ENST00000309615 SYCP2Q9BX26 1530 aa19.86■□□□□ 0.77
APTX-201ENST00000309615 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
APTX-201ENST00000309615 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
APTX-201ENST00000309615 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
APTX-201ENST00000309615 POGZQ7Z3K3 1410 aa19.85■□□□□ 0.77
APTX-201ENST00000309615 TRAPPC8Q9Y2L5 1435 aa19.84■□□□□ 0.77
APTX-201ENST00000309615 FRMPD1Q5SYB0 1578 aa19.84■□□□□ 0.77
APTX-201ENST00000309615 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
APTX-201ENST00000309615 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
APTX-201ENST00000309615 RICTORQ6R327 1708 aa19.82■□□□□ 0.76
APTX-201ENST00000309615 MBD5Q9P267 1494 aa19.82■□□□□ 0.76
APTX-201ENST00000309615 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
APTX-201ENST00000309615 TCOF1Q13428 1488 aaKnown RBP19.8■□□□□ 0.76
APTX-201ENST00000309615 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
APTX-201ENST00000309615 KDM5CP41229 1560 aa19.77■□□□□ 0.76
APTX-201ENST00000309615 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
APTX-201ENST00000309615 ARHGEF5Q12774 1597 aa19.75■□□□□ 0.75
APTX-201ENST00000309615 ZMYM4Q5VZL5 1548 aa19.75■□□□□ 0.75
APTX-201ENST00000309615 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
APTX-201ENST00000309615 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
APTX-201ENST00000309615 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
APTX-201ENST00000309615 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 ABCC5O15440 1437 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 HECW2Q9P2P5 1572 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 DAPK1P53355 1430 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
APTX-201ENST00000309615 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
APTX-201ENST00000309615 DNMT1P26358 1616 aaKnown RBP19.7■□□□□ 0.74
APTX-201ENST00000309615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
APTX-201ENST00000309615 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
APTX-201ENST00000309615 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
APTX-201ENST00000309615 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
APTX-201ENST00000309615 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
APTX-201ENST00000309615 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
APTX-201ENST00000309615 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
APTX-201ENST00000309615 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
APTX-201ENST00000309615 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
APTX-201ENST00000309615 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
APTX-201ENST00000309615 ITGAEP38570 1179 aa19.65■□□□□ 0.74
APTX-201ENST00000309615 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
APTX-201ENST00000309615 PTPRKQ15262 1439 aa19.64■□□□□ 0.73
APTX-201ENST00000309615 CHIC2Q9UKJ5 165 aa19.64■□□□□ 0.73
APTX-201ENST00000309615 SHANK2Q9UPX8 1470 aa19.64■□□□□ 0.73
APTX-201ENST00000309615 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
APTX-201ENST00000309615 DIP2CQ9Y2E4 1556 aa19.63■□□□□ 0.73
APTX-201ENST00000309615 MAST1Q9Y2H9 1570 aa19.63■□□□□ 0.73
APTX-201ENST00000309615 ATP10AO60312 1499 aa19.61■□□□□ 0.73
APTX-201ENST00000309615 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
APTX-201ENST00000309615 NCOA1Q15788 1441 aa19.56■□□□□ 0.72
APTX-201ENST00000309615 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
APTX-201ENST00000309615 SIGLEC1Q9BZZ2 1709 aa19.56■□□□□ 0.72
APTX-201ENST00000309615 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
APTX-201ENST00000309615 ADGBQ8N7X0 1667 aa19.55■□□□□ 0.72
APTX-201ENST00000309615 ADGRL2O95490 1459 aa19.55■□□□□ 0.72
APTX-201ENST00000309615 A2MP01023 1474 aa19.55■□□□□ 0.72
APTX-201ENST00000309615 KIF15Q9NS87 1388 aa19.54■□□□□ 0.72
APTX-201ENST00000309615 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
APTX-201ENST00000309615 ARID4BQ4LE39 1312 aaPredicted RBP19.53■□□□□ 0.72
APTX-201ENST00000309615 DHX29Q7Z478 1369 aaKnown RBP19.53■□□□□ 0.72
APTX-201ENST00000309615 ROCK1Q13464 1354 aa19.52■□□□□ 0.72
APTX-201ENST00000309615 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
APTX-201ENST00000309615 AGLP35573 1532 aa19.48■□□□□ 0.71
APTX-201ENST00000309615 MLECQ14165 292 aa19.46■□□□□ 0.71
APTX-201ENST00000309615 KIF3BO15066 747 aa19.45■□□□□ 0.7
APTX-201ENST00000309615 ERBINQ96RT1 1412 aa19.45■□□□□ 0.7
APTX-201ENST00000309615 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
APTX-201ENST00000309615 NAIPQ13075 1403 aa19.42■□□□□ 0.7
APTX-201ENST00000309615 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
APTX-201ENST00000309615 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
APTX-201ENST00000309615 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
APTX-201ENST00000309615 GGT6Q6P531 493 aa19.41■□□□□ 0.7
APTX-201ENST00000309615 EIF2AK4Q9P2K8 1649 aaKnown RBP19.4■□□□□ 0.7
APTX-201ENST00000309615 GCC2Q8IWJ2 1684 aa19.37■□□□□ 0.69
APTX-201ENST00000309615 KDM4FA0A1W2PPD8 638 aa19.37■□□□□ 0.69
APTX-201ENST00000309615 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
APTX-201ENST00000309615 ADAMTSL3P82987 1691 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms