RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
CSN3-201ENST00000304954 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
CSN3-201ENST00000304954 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
CSN3-201ENST00000304954 MFSD10Q14728 455 aa11.42□□□□□ -0.58
CSN3-201ENST00000304954 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
CSN3-201ENST00000304954 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
CSN3-201ENST00000304954 NCKAP5LQ9HCH0 1330 aa11.41□□□□□ -0.58
CSN3-201ENST00000304954 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
CSN3-201ENST00000304954 NBR1Q14596 966 aa11.39□□□□□ -0.59
CSN3-201ENST00000304954 E2F4Q16254 413 aa11.39□□□□□ -0.59
CSN3-201ENST00000304954 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
CSN3-201ENST00000304954 FOXK1P85037 733 aa11.35□□□□□ -0.59
CSN3-201ENST00000304954 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
CSN3-201ENST00000304954 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
CSN3-201ENST00000304954 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
CSN3-201ENST00000304954 KIF3CO14782 793 aa11.31□□□□□ -0.6
CSN3-201ENST00000304954 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
CSN3-201ENST00000304954 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
CSN3-201ENST00000304954 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
CSN3-201ENST00000304954 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
CSN3-201ENST00000304954 DSG2Q14126 1118 aa11.28□□□□□ -0.6
CSN3-201ENST00000304954 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
CSN3-201ENST00000304954 LHX8Q68G74 356 aa11.26□□□□□ -0.61
CSN3-201ENST00000304954 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
CSN3-201ENST00000304954 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
CSN3-201ENST00000304954 TMEM92Q6UXU6 159 aa11.21□□□□□ -0.61
CSN3-201ENST00000304954 TBC1D12O60347 775 aa11.2□□□□□ -0.62
CSN3-201ENST00000304954 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
CSN3-201ENST00000304954 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
CSN3-201ENST00000304954 SLC34A2O95436 690 aa11.17□□□□□ -0.62
CSN3-201ENST00000304954 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
CSN3-201ENST00000304954 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
CSN3-201ENST00000304954 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
CSN3-201ENST00000304954 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CSN3-201ENST00000304954 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
CSN3-201ENST00000304954 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
CSN3-201ENST00000304954 SNPHO15079 494 aa11.12□□□□□ -0.63
CSN3-201ENST00000304954 DOK7Q18PE1 504 aa11.12□□□□□ -0.63
CSN3-201ENST00000304954 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
CSN3-201ENST00000304954 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
CSN3-201ENST00000304954 DPYSL4O14531 572 aa11.11□□□□□ -0.63
CSN3-201ENST00000304954 PDIA6Q15084 440 aa11.11□□□□□ -0.63
CSN3-201ENST00000304954 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
CSN3-201ENST00000304954 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
CSN3-201ENST00000304954 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
CSN3-201ENST00000304954 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
CSN3-201ENST00000304954 SEMA3EO15041 775 aa11.05□□□□□ -0.64
CSN3-201ENST00000304954 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
CSN3-201ENST00000304954 EVI5O60447 810 aa11.02□□□□□ -0.65
CSN3-201ENST00000304954 PTGER2P43116 358 aa11.02□□□□□ -0.65
CSN3-201ENST00000304954 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
CSN3-201ENST00000304954 OTUD5Q96G74 571 aa11□□□□□ -0.65
CSN3-201ENST00000304954 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
CSN3-201ENST00000304954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSN3-201ENST00000304954 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
CSN3-201ENST00000304954 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.65
CSN3-201ENST00000304954 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
CSN3-201ENST00000304954 EPAS1Q99814 870 aa10.93□□□□□ -0.66
CSN3-201ENST00000304954 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
CSN3-201ENST00000304954 PHF14O94880 888 aa10.92□□□□□ -0.66
CSN3-201ENST00000304954 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
CSN3-201ENST00000304954 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
CSN3-201ENST00000304954 GPR153Q6NV75 609 aa10.9□□□□□ -0.66
CSN3-201ENST00000304954 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
CSN3-201ENST00000304954 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
CSN3-201ENST00000304954 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
CSN3-201ENST00000304954 HOXB1P14653 301 aaPredicted RBP10.88□□□□□ -0.67
CSN3-201ENST00000304954 DDX12PQ92771 950 aa10.88□□□□□ -0.67
CSN3-201ENST00000304954 KDM4FA0A1W2PPD8 638 aa10.87□□□□□ -0.67
CSN3-201ENST00000304954 NUDT7P0C024 238 aa10.87□□□□□ -0.67
CSN3-201ENST00000304954 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
CSN3-201ENST00000304954 TYW1BQ6NUM6 668 aa10.86□□□□□ -0.67
CSN3-201ENST00000304954 OSBPP22059 807 aa10.85□□□□□ -0.67
CSN3-201ENST00000304954 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
CSN3-201ENST00000304954 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
CSN3-201ENST00000304954 FOSBP53539 338 aa10.82□□□□□ -0.68
CSN3-201ENST00000304954 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
CSN3-201ENST00000304954 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
CSN3-201ENST00000304954 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
CSN3-201ENST00000304954 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
CSN3-201ENST00000304954 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
CSN3-201ENST00000304954 PCDHGA10Q9Y5H3 936 aa10.81□□□□□ -0.68
CSN3-201ENST00000304954 MAP3K7O43318 606 aa10.79□□□□□ -0.68
CSN3-201ENST00000304954 FCHSD2O94868 740 aa10.79□□□□□ -0.68
CSN3-201ENST00000304954 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
CSN3-201ENST00000304954 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.68
CSN3-201ENST00000304954 LHX6Q9UPM6 363 aa10.79□□□□□ -0.68
CSN3-201ENST00000304954 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
CSN3-201ENST00000304954 HIC1Q14526 733 aa10.76□□□□□ -0.69
CSN3-201ENST00000304954 ZMYND10O75800 440 aa10.75□□□□□ -0.69
CSN3-201ENST00000304954 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
CSN3-201ENST00000304954 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
CSN3-201ENST00000304954 ST18O60284 1047 aa10.73□□□□□ -0.69
CSN3-201ENST00000304954 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
CSN3-201ENST00000304954 BCL2L12Q9HB09 334 aa10.73□□□□□ -0.69
CSN3-201ENST00000304954 GNPATO15228 680 aa10.72□□□□□ -0.69
CSN3-201ENST00000304954 EMP3P54852 163 aa10.72□□□□□ -0.69
CSN3-201ENST00000304954 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
CSN3-201ENST00000304954 ERBB3P21860 1342 aa10.72□□□□□ -0.69
CSN3-201ENST00000304954 PTPREP23469 700 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms