RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
RAB40A-201ENST00000304236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
RAB40A-201ENST00000304236 ITGAEP38570 1179 aa20.66■□□□□ 0.9
RAB40A-201ENST00000304236 NEO1Q92859 1461 aa20.64■□□□□ 0.89
RAB40A-201ENST00000304236 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
RAB40A-201ENST00000304236 MIER1Q8N108 512 aa20.62■□□□□ 0.89
RAB40A-201ENST00000304236 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
RAB40A-201ENST00000304236 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
RAB40A-201ENST00000304236 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
RAB40A-201ENST00000304236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB40A-201ENST00000304236 AKNAQ7Z591 1439 aa20.52■□□□□ 0.87
RAB40A-201ENST00000304236 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
RAB40A-201ENST00000304236 FANCAO15360 1455 aa20.51■□□□□ 0.87
RAB40A-201ENST00000304236 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
RAB40A-201ENST00000304236 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
RAB40A-201ENST00000304236 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
RAB40A-201ENST00000304236 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
RAB40A-201ENST00000304236 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
RAB40A-201ENST00000304236 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
RAB40A-201ENST00000304236 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
RAB40A-201ENST00000304236 FRMPD1Q5SYB0 1578 aa20.48■□□□□ 0.87
RAB40A-201ENST00000304236 CFAP74Q9C0B2 1584 aa20.48■□□□□ 0.87
RAB40A-201ENST00000304236 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
RAB40A-201ENST00000304236 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
RAB40A-201ENST00000304236 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
RAB40A-201ENST00000304236 ARID4BQ4LE39 1312 aaPredicted RBP20.46■□□□□ 0.87
RAB40A-201ENST00000304236 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
RAB40A-201ENST00000304236 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
RAB40A-201ENST00000304236 PLCH2O75038 1416 aa20.44■□□□□ 0.86
RAB40A-201ENST00000304236 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
RAB40A-201ENST00000304236 HECW2Q9P2P5 1572 aa20.43■□□□□ 0.86
RAB40A-201ENST00000304236 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
RAB40A-201ENST00000304236 MYOM3Q5VTT5 1437 aa20.42■□□□□ 0.86
RAB40A-201ENST00000304236 RICTORQ6R327 1708 aa20.41■□□□□ 0.86
RAB40A-201ENST00000304236 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
RAB40A-201ENST00000304236 ARHGEF40Q8TER5 1519 aa20.4■□□□□ 0.86
RAB40A-201ENST00000304236 ADAMTSL3P82987 1691 aa20.39■□□□□ 0.86
RAB40A-201ENST00000304236 TROQ12816 1431 aaPredicted RBP20.39■□□□□ 0.85
RAB40A-201ENST00000304236 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
RAB40A-201ENST00000304236 PTPRMP28827 1452 aa20.37■□□□□ 0.85
RAB40A-201ENST00000304236 HFM1A2PYH4 1435 aa20.37■□□□□ 0.85
RAB40A-201ENST00000304236 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
RAB40A-201ENST00000304236 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
RAB40A-201ENST00000304236 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
RAB40A-201ENST00000304236 KIF14Q15058 1648 aa20.35■□□□□ 0.85
RAB40A-201ENST00000304236 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
RAB40A-201ENST00000304236 ZFYVE16Q7Z3T8 1539 aa20.34■□□□□ 0.85
RAB40A-201ENST00000304236 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.84
RAB40A-201ENST00000304236 PTPN23Q9H3S7 1636 aa20.33■□□□□ 0.84
RAB40A-201ENST00000304236 YEATS2Q9ULM3 1422 aa20.33■□□□□ 0.84
RAB40A-201ENST00000304236 SIN3AQ96ST3 1273 aa20.32■□□□□ 0.84
RAB40A-201ENST00000304236 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
RAB40A-201ENST00000304236 MADDQ8WXG6 1647 aa20.3■□□□□ 0.84
RAB40A-201ENST00000304236 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
RAB40A-201ENST00000304236 ARHGAP5Q13017 1502 aa20.29■□□□□ 0.84
RAB40A-201ENST00000304236 NAIPQ13075 1403 aa20.27■□□□□ 0.84
RAB40A-201ENST00000304236 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
RAB40A-201ENST00000304236 ATP10AO60312 1499 aa20.25■□□□□ 0.83
RAB40A-201ENST00000304236 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
RAB40A-201ENST00000304236 MIA2Q96PC5 1412 aa20.25■□□□□ 0.83
RAB40A-201ENST00000304236 MLECQ14165 292 aa20.24■□□□□ 0.83
RAB40A-201ENST00000304236 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
RAB40A-201ENST00000304236 RIMS1Q86UR5 1692 aaKnown RBP20.23■□□□□ 0.83
RAB40A-201ENST00000304236 C9orf84Q5VXU9 1444 aa20.22■□□□□ 0.83
RAB40A-201ENST00000304236 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
RAB40A-201ENST00000304236 MYT1LQ9UL68 1186 aa20.22■□□□□ 0.83
RAB40A-201ENST00000304236 GCC2Q8IWJ2 1684 aa20.21■□□□□ 0.83
RAB40A-201ENST00000304236 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
RAB40A-201ENST00000304236 SIGLEC1Q9BZZ2 1709 aa20.19■□□□□ 0.82
RAB40A-201ENST00000304236 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
RAB40A-201ENST00000304236 CDC42BPBQ9Y5S2 1711 aa20.18■□□□□ 0.82
RAB40A-201ENST00000304236 KDM5CP41229 1560 aa20.18■□□□□ 0.82
RAB40A-201ENST00000304236 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
RAB40A-201ENST00000304236 LMTK3Q96Q04 1460 aa20.16■□□□□ 0.82
RAB40A-201ENST00000304236 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
RAB40A-201ENST00000304236 ABCC1P33527 1531 aa20.14■□□□□ 0.81
RAB40A-201ENST00000304236 TRAPPC8Q9Y2L5 1435 aa20.14■□□□□ 0.81
RAB40A-201ENST00000304236 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
RAB40A-201ENST00000304236 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
RAB40A-201ENST00000304236 FER1L4A9Z1Z3 1794 aa20.12■□□□□ 0.81
RAB40A-201ENST00000304236 DIP2CQ9Y2E4 1556 aa20.1■□□□□ 0.81
RAB40A-201ENST00000304236 CDC42BPAQ5VT25 1732 aa20.1■□□□□ 0.81
RAB40A-201ENST00000304236 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
RAB40A-201ENST00000304236 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
RAB40A-201ENST00000304236 ITSN2Q9NZM3 1697 aa20.08■□□□□ 0.81
RAB40A-201ENST00000304236 REREQ9P2R6 1566 aa20.08■□□□□ 0.8
RAB40A-201ENST00000304236 HSPA2P54652 639 aa20.08■□□□□ 0.8
RAB40A-201ENST00000304236 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
RAB40A-201ENST00000304236 ROCK1Q13464 1354 aa20.07■□□□□ 0.8
RAB40A-201ENST00000304236 CFDP1Q9UEE9 299 aaPredicted RBP20.07■□□□□ 0.8
RAB40A-201ENST00000304236 ABCA6Q8N139 1617 aa20.06■□□□□ 0.8
RAB40A-201ENST00000304236 CEBPAP49715 358 aaPredicted RBP20.05■□□□□ 0.8
RAB40A-201ENST00000304236 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
RAB40A-201ENST00000304236 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB40A-201ENST00000304236 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
RAB40A-201ENST00000304236 AGLP35573 1532 aa20.04■□□□□ 0.8
RAB40A-201ENST00000304236 DNMT1P26358 1616 aaKnown RBP20.03■□□□□ 0.8
RAB40A-201ENST00000304236 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
RAB40A-201ENST00000304236 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
RAB40A-201ENST00000304236 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms