RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.61
CTNNA1-201ENST00000302763 MAST1Q9Y2H9 1570 aa11.27□□□□□ -0.61
CTNNA1-201ENST00000302763 ABCC5O15440 1437 aa11.27□□□□□ -0.61
CTNNA1-201ENST00000302763 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
CTNNA1-201ENST00000302763 DAPK1P53355 1430 aa11.25□□□□□ -0.61
CTNNA1-201ENST00000302763 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
CTNNA1-201ENST00000302763 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-201ENST00000302763 SHANK2Q9UPX8 1470 aa11.23□□□□□ -0.61
CTNNA1-201ENST00000302763 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
CTNNA1-201ENST00000302763 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
CTNNA1-201ENST00000302763 PTPRGP23470 1445 aa11.22□□□□□ -0.61
CTNNA1-201ENST00000302763 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-201ENST00000302763 ROCK1Q13464 1354 aa11.21□□□□□ -0.62
CTNNA1-201ENST00000302763 PLXNC1O60486 1568 aa11.21□□□□□ -0.62
CTNNA1-201ENST00000302763 KDM5DQ9BY66 1539 aa11.2□□□□□ -0.62
CTNNA1-201ENST00000302763 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
CTNNA1-201ENST00000302763 ABCC1P33527 1531 aa11.19□□□□□ -0.62
CTNNA1-201ENST00000302763 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
CTNNA1-201ENST00000302763 FBLN2P98095 1184 aa11.18□□□□□ -0.62
CTNNA1-201ENST00000302763 UNC13BO14795 1591 aa11.17□□□□□ -0.62
CTNNA1-201ENST00000302763 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-201ENST00000302763 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
CTNNA1-201ENST00000302763 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-201ENST00000302763 PZPP20742 1482 aa11.16□□□□□ -0.62
CTNNA1-201ENST00000302763 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
CTNNA1-201ENST00000302763 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-201ENST00000302763 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
CTNNA1-201ENST00000302763 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
CTNNA1-201ENST00000302763 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
CTNNA1-201ENST00000302763 NCOA1Q15788 1441 aa11.15□□□□□ -0.62
CTNNA1-201ENST00000302763 MYT1Q01538 1121 aa11.15□□□□□ -0.62
CTNNA1-201ENST00000302763 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
CTNNA1-201ENST00000302763 SYCP2Q9BX26 1530 aa11.14□□□□□ -0.63
CTNNA1-201ENST00000302763 BCORL1Q5H9F3 1711 aa11.13□□□□□ -0.63
CTNNA1-201ENST00000302763 ITGAEP38570 1179 aa11.13□□□□□ -0.63
CTNNA1-201ENST00000302763 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-201ENST00000302763 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
CTNNA1-201ENST00000302763 WDR7Q9Y4E6 1490 aa11.11□□□□□ -0.63
CTNNA1-201ENST00000302763 ZFYVE16Q7Z3T8 1539 aa11.11□□□□□ -0.63
CTNNA1-201ENST00000302763 PLCH2O75038 1416 aa11.1□□□□□ -0.63
CTNNA1-201ENST00000302763 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
CTNNA1-201ENST00000302763 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
CTNNA1-201ENST00000302763 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
CTNNA1-201ENST00000302763 VWDEQ8N2E2 1590 aa11.09□□□□□ -0.63
CTNNA1-201ENST00000302763 KDM5CP41229 1560 aa11.08□□□□□ -0.64
CTNNA1-201ENST00000302763 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
CTNNA1-201ENST00000302763 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
CTNNA1-201ENST00000302763 FRMPD1Q5SYB0 1578 aa11.07□□□□□ -0.64
CTNNA1-201ENST00000302763 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
CTNNA1-201ENST00000302763 KIF13AQ9H1H9 1805 aa11.06□□□□□ -0.64
CTNNA1-201ENST00000302763 GLI2P10070 1586 aa11.06□□□□□ -0.64
CTNNA1-201ENST00000302763 CCDC141Q6ZP82 1450 aa11.06□□□□□ -0.64
CTNNA1-201ENST00000302763 SIGLEC1Q9BZZ2 1709 aa11.05□□□□□ -0.64
CTNNA1-201ENST00000302763 C9orf84Q5VXU9 1444 aa11.05□□□□□ -0.64
CTNNA1-201ENST00000302763 ASXL2Q76L83 1435 aa11.04□□□□□ -0.64
CTNNA1-201ENST00000302763 POLR1AO95602 1720 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-201ENST00000302763 FAM50AQ14320 339 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-201ENST00000302763 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-201ENST00000302763 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
CTNNA1-201ENST00000302763 DIP2BQ9P265 1576 aa11.02□□□□□ -0.65
CTNNA1-201ENST00000302763 E9PCH4 1651 aa11.02□□□□□ -0.65
CTNNA1-201ENST00000302763 RNF17Q9BXT8 1623 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-201ENST00000302763 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
CTNNA1-201ENST00000302763 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
CTNNA1-201ENST00000302763 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
CTNNA1-201ENST00000302763 CFAP74Q9C0B2 1584 aa11□□□□□ -0.65
CTNNA1-201ENST00000302763 ABCA6Q8N139 1617 aa10.99□□□□□ -0.65
CTNNA1-201ENST00000302763 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
CTNNA1-201ENST00000302763 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-201ENST00000302763 FAM135AQ9P2D6 1515 aa10.98□□□□□ -0.65
CTNNA1-201ENST00000302763 DUOX2Q9NRD8 1548 aa10.98□□□□□ -0.65
CTNNA1-201ENST00000302763 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CTNNA1-201ENST00000302763 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
CTNNA1-201ENST00000302763 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
CTNNA1-201ENST00000302763 IFT172Q9UG01 1749 aa10.97□□□□□ -0.65
CTNNA1-201ENST00000302763 PLEKHD1A6NEE1 506 aa10.97□□□□□ -0.65
CTNNA1-201ENST00000302763 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
CTNNA1-201ENST00000302763 ATP10AO60312 1499 aa10.97□□□□□ -0.65
CTNNA1-201ENST00000302763 ATP7AQ04656 1500 aa10.96□□□□□ -0.65
CTNNA1-201ENST00000302763 CEP152O94986 1710 aa10.96□□□□□ -0.66
CTNNA1-201ENST00000302763 DIEXFQ68CQ4 756 aaKnown RBP10.96□□□□□ -0.66
CTNNA1-201ENST00000302763 CFDP1Q9UEE9 299 aaPredicted RBP10.96□□□□□ -0.66
CTNNA1-201ENST00000302763 ERBINQ96RT1 1412 aa10.95□□□□□ -0.66
CTNNA1-201ENST00000302763 ANKRD50Q9ULJ7 1429 aa10.95□□□□□ -0.66
CTNNA1-201ENST00000302763 FANCAO15360 1455 aa10.95□□□□□ -0.66
CTNNA1-201ENST00000302763 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
CTNNA1-201ENST00000302763 SIN3AQ96ST3 1273 aa10.94□□□□□ -0.66
CTNNA1-201ENST00000302763 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
CTNNA1-201ENST00000302763 TET3O43151 1660 aa10.94□□□□□ -0.66
CTNNA1-201ENST00000302763 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
CTNNA1-201ENST00000302763 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
CTNNA1-201ENST00000302763 HECW2Q9P2P5 1572 aa10.92□□□□□ -0.66
CTNNA1-201ENST00000302763 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
CTNNA1-201ENST00000302763 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
CTNNA1-201ENST00000302763 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
CTNNA1-201ENST00000302763 KIF15Q9NS87 1388 aa10.91□□□□□ -0.66
CTNNA1-201ENST00000302763 LMTK2Q8IWU2 1503 aa10.91□□□□□ -0.66
CTNNA1-201ENST00000302763 HNRNPMP52272 730 aaKnown RBP eCLIP10.91□□□□□ -0.662e-6■■■■■ 32.5
CTNNA1-201ENST00000302763 ANKRD30AQ9BXX3 1397 aa10.91□□□□□ -0.66
CTNNA1-201ENST00000302763 SPATA31E1Q6ZUB1 1445 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms