RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 DENND4BO75064 1496 aaPredicted RBP18.32■□□□□ 0.52
CLCC1-201ENST00000302500 KDM5CP41229 1560 aa18.31■□□□□ 0.52
CLCC1-201ENST00000302500 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
CLCC1-201ENST00000302500 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
CLCC1-201ENST00000302500 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
CLCC1-201ENST00000302500 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
CLCC1-201ENST00000302500 ABCC1P33527 1531 aa18.28■□□□□ 0.52
CLCC1-201ENST00000302500 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
CLCC1-201ENST00000302500 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
CLCC1-201ENST00000302500 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
CLCC1-201ENST00000302500 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
CLCC1-201ENST00000302500 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
CLCC1-201ENST00000302500 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
CLCC1-201ENST00000302500 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
CLCC1-201ENST00000302500 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
CLCC1-201ENST00000302500 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
CLCC1-201ENST00000302500 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
CLCC1-201ENST00000302500 TIAM1Q13009 1591 aa18.24■□□□□ 0.51
CLCC1-201ENST00000302500 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
CLCC1-201ENST00000302500 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
CLCC1-201ENST00000302500 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
CLCC1-201ENST00000302500 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
CLCC1-201ENST00000302500 EFCAB2Q5VUJ9 269 aa18.2■□□□□ 0.5
CLCC1-201ENST00000302500 MAP3K1Q13233 1512 aa18.19■□□□□ 0.5
CLCC1-201ENST00000302500 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
CLCC1-201ENST00000302500 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
CLCC1-201ENST00000302500 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
CLCC1-201ENST00000302500 KIDINS220Q9ULH0 1771 aa18.18■□□□□ 0.5
CLCC1-201ENST00000302500 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
CLCC1-201ENST00000302500 ABCA6Q8N139 1617 aa18.17■□□□□ 0.5
CLCC1-201ENST00000302500 MLH3Q9UHC1 1453 aa18.17■□□□□ 0.5
CLCC1-201ENST00000302500 MADDQ8WXG6 1647 aa18.15■□□□□ 0.5
CLCC1-201ENST00000302500 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
CLCC1-201ENST00000302500 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
CLCC1-201ENST00000302500 KIAA1107Q9UPP5 1409 aa18.12■□□□□ 0.49
CLCC1-201ENST00000302500 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
CLCC1-201ENST00000302500 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
CLCC1-201ENST00000302500 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
CLCC1-201ENST00000302500 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
CLCC1-201ENST00000302500 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
CLCC1-201ENST00000302500 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
CLCC1-201ENST00000302500 ATP10AO60312 1499 aa18.11■□□□□ 0.49
CLCC1-201ENST00000302500 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
CLCC1-201ENST00000302500 PTPRMP28827 1452 aa18.08■□□□□ 0.49
CLCC1-201ENST00000302500 AGLP35573 1532 aa18.07■□□□□ 0.48
CLCC1-201ENST00000302500 PLXNC1O60486 1568 aa18.06■□□□□ 0.48
CLCC1-201ENST00000302500 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
CLCC1-201ENST00000302500 PLEKHH2Q8IVE3 1493 aa18.05■□□□□ 0.48
CLCC1-201ENST00000302500 RIMS1Q86UR5 1692 aaKnown RBP18.05■□□□□ 0.48
CLCC1-201ENST00000302500 FER1L4A9Z1Z3 1794 aa18.04■□□□□ 0.48
CLCC1-201ENST00000302500 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
CLCC1-201ENST00000302500 ATP7AQ04656 1500 aa18.02■□□□□ 0.48
CLCC1-201ENST00000302500 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
CLCC1-201ENST00000302500 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
CLCC1-201ENST00000302500 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
CLCC1-201ENST00000302500 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
CLCC1-201ENST00000302500 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
CLCC1-201ENST00000302500 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLCC1-201ENST00000302500 RTEL1-TNFRSF6BF6WH68 1400 aa17.95■□□□□ 0.46
CLCC1-201ENST00000302500 LMTK3Q96Q04 1460 aa17.94■□□□□ 0.46
CLCC1-201ENST00000302500 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
CLCC1-201ENST00000302500 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
CLCC1-201ENST00000302500 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
CLCC1-201ENST00000302500 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
CLCC1-201ENST00000302500 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
CLCC1-201ENST00000302500 C3P01024 1663 aa17.92■□□□□ 0.46
CLCC1-201ENST00000302500 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
CLCC1-201ENST00000302500 A2MP01023 1474 aa17.9■□□□□ 0.46
CLCC1-201ENST00000302500 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
CLCC1-201ENST00000302500 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
CLCC1-201ENST00000302500 MROH2AA6NES4 1674 aa17.89■□□□□ 0.46
CLCC1-201ENST00000302500 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
CLCC1-201ENST00000302500 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
CLCC1-201ENST00000302500 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
CLCC1-201ENST00000302500 PREX1Q8TCU6 1659 aa17.84■□□□□ 0.45
CLCC1-201ENST00000302500 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
CLCC1-201ENST00000302500 MLECQ14165 292 aa17.82■□□□□ 0.44
CLCC1-201ENST00000302500 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
CLCC1-201ENST00000302500 DNMT1P26358 1616 aaKnown RBP17.82■□□□□ 0.44
CLCC1-201ENST00000302500 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
CLCC1-201ENST00000302500 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
CLCC1-201ENST00000302500 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
CLCC1-201ENST00000302500 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
CLCC1-201ENST00000302500 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
CLCC1-201ENST00000302500 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
CLCC1-201ENST00000302500 ABCC5O15440 1437 aa17.8■□□□□ 0.44
CLCC1-201ENST00000302500 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
CLCC1-201ENST00000302500 EIF2AK4Q9P2K8 1649 aaKnown RBP17.78■□□□□ 0.44
CLCC1-201ENST00000302500 FAM135AQ9P2D6 1515 aa17.78■□□□□ 0.44
CLCC1-201ENST00000302500 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
CLCC1-201ENST00000302500 DAPK1P53355 1430 aa17.74■□□□□ 0.43
CLCC1-201ENST00000302500 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
CLCC1-201ENST00000302500 DEPDC5O75140 1603 aa17.73■□□□□ 0.43
CLCC1-201ENST00000302500 NPATQ14207 1427 aa17.73■□□□□ 0.43
CLCC1-201ENST00000302500 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
CLCC1-201ENST00000302500 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
CLCC1-201ENST00000302500 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
CLCC1-201ENST00000302500 MYT1LQ9UL68 1186 aa17.72■□□□□ 0.43
CLCC1-201ENST00000302500 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
CLCC1-201ENST00000302500 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms